RNA–Protein interactions for RNA: ENST00000409787.4

NT5C3A-206, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 2 BASIC

Gene NT5C3A, Length 840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-206ENST00000409787 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
NT5C3A-206ENST00000409787 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
NT5C3A-206ENST00000409787 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
NT5C3A-206ENST00000409787 PHF23Q9BUL5 403 aaPredicted RBP24.89■■□□□ 1.58
NT5C3A-206ENST00000409787 FOXD1Q16676 465 aa23.62■■□□□ 1.37
NT5C3A-206ENST00000409787 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
NT5C3A-206ENST00000409787 MSH5O43196 834 aa22.33■■□□□ 1.17
NT5C3A-206ENST00000409787 PIAS4Q8N2W9 510 aaPredicted RBP21.98■■□□□ 1.11
NT5C3A-206ENST00000409787 PLPPR3Q6T4P5 718 aa21.74■■□□□ 1.07
NT5C3A-206ENST00000409787 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
NT5C3A-206ENST00000409787 ADRA2BP18089 450 aa21.59■■□□□ 1.05
NT5C3A-206ENST00000409787 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
NT5C3A-206ENST00000409787 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
NT5C3A-206ENST00000409787 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
NT5C3A-206ENST00000409787 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
NT5C3A-206ENST00000409787 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
NT5C3A-206ENST00000409787 PPP4R3CPQ6ZMV5 832 aa18.99■□□□□ 0.63
NT5C3A-206ENST00000409787 HOXD11P31277 338 aaPredicted RBP18.98■□□□□ 0.63
NT5C3A-206ENST00000409787 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
NT5C3A-206ENST00000409787 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
NT5C3A-206ENST00000409787 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
NT5C3A-206ENST00000409787 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
NT5C3A-206ENST00000409787 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
NT5C3A-206ENST00000409787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.53e-6■■■■□ 20.1
NT5C3A-206ENST00000409787 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
NT5C3A-206ENST00000409787 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
NT5C3A-206ENST00000409787 POTEHQ6S545 545 aa17.72■□□□□ 0.43
NT5C3A-206ENST00000409787 KCNA4P22459 653 aa17.71■□□□□ 0.43
NT5C3A-206ENST00000409787 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
NT5C3A-206ENST00000409787 CAPN15O75808 1086 aa17.64■□□□□ 0.41
NT5C3A-206ENST00000409787 DSG3P32926 999 aa17.6■□□□□ 0.41
NT5C3A-206ENST00000409787 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
NT5C3A-206ENST00000409787 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
NT5C3A-206ENST00000409787 ABCB7O75027 752 aa17.17■□□□□ 0.34
NT5C3A-206ENST00000409787 APLP2Q06481 763 aa17.16■□□□□ 0.34
NT5C3A-206ENST00000409787 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
NT5C3A-206ENST00000409787 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
NT5C3A-206ENST00000409787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
NT5C3A-206ENST00000409787 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
NT5C3A-206ENST00000409787 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
NT5C3A-206ENST00000409787 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
NT5C3A-206ENST00000409787 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
NT5C3A-206ENST00000409787 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
NT5C3A-206ENST00000409787 POLA2Q14181 598 aa16.62■□□□□ 0.25
NT5C3A-206ENST00000409787 MYCNP04198 464 aaPredicted RBP16.5■□□□□ 0.23
NT5C3A-206ENST00000409787 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
NT5C3A-206ENST00000409787 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
NT5C3A-206ENST00000409787 ZBTB22O15209 634 aa16.32■□□□□ 0.2
NT5C3A-206ENST00000409787 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
NT5C3A-206ENST00000409787 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
NT5C3A-206ENST00000409787 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
NT5C3A-206ENST00000409787 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
NT5C3A-206ENST00000409787 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
NT5C3A-206ENST00000409787 PIP4P2Q8N4L2 257 aa16.16■□□□□ 0.18
NT5C3A-206ENST00000409787 ATF5Q9Y2D1 282 aaPredicted RBP16.16■□□□□ 0.18
NT5C3A-206ENST00000409787 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
NT5C3A-206ENST00000409787 HAX1O00165 279 aa16.08■□□□□ 0.16
NT5C3A-206ENST00000409787 PITPNM1O00562 1244 aa16■□□□□ 0.15
NT5C3A-206ENST00000409787 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
NT5C3A-206ENST00000409787 ATXN8OSP0DMR3 200 aa15.84■□□□□ 0.13
NT5C3A-206ENST00000409787 EVX2Q03828 476 aa15.78■□□□□ 0.12
NT5C3A-206ENST00000409787 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
NT5C3A-206ENST00000409787 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
NT5C3A-206ENST00000409787 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
NT5C3A-206ENST00000409787 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
NT5C3A-206ENST00000409787 FBLN2P98095 1184 aa15.61■□□□□ 0.09
NT5C3A-206ENST00000409787 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
NT5C3A-206ENST00000409787 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
NT5C3A-206ENST00000409787 C19orf67A6NJJ6 358 aa15.47■□□□□ 0.07
NT5C3A-206ENST00000409787 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
NT5C3A-206ENST00000409787 GABBR2O75899 941 aa15.4■□□□□ 0.06
NT5C3A-206ENST00000409787 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
NT5C3A-206ENST00000409787 LHX8Q68G74 356 aa15.35■□□□□ 0.05
NT5C3A-206ENST00000409787 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
NT5C3A-206ENST00000409787 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
NT5C3A-206ENST00000409787 PRR29P0C7W0 189 aa15.24■□□□□ 0.03
NT5C3A-206ENST00000409787 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
NT5C3A-206ENST00000409787 CD44P16070 742 aaKnown RBP15.08■□□□□ 0
NT5C3A-206ENST00000409787 POTEIP0CG38 1075 aa15.04■□□□□ -0
NT5C3A-206ENST00000409787 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
NT5C3A-206ENST00000409787 CLCN6P51797 869 aa14.95□□□□□ -0.02
NT5C3A-206ENST00000409787 DCBLD2Q96PD2 775 aa14.92□□□□□ -0.02
NT5C3A-206ENST00000409787 PLSCR2Q9NRY7 297 aa14.88□□□□□ -0.03
NT5C3A-206ENST00000409787 ZRANB1Q9UGI0 708 aa14.8□□□□□ -0.04
NT5C3A-206ENST00000409787 ZNF579Q8NAF0 562 aaKnown RBP14.78□□□□□ -0.04
NT5C3A-206ENST00000409787 CREBZFQ9NS37 354 aa14.68□□□□□ -0.06
NT5C3A-206ENST00000409787 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
NT5C3A-206ENST00000409787 FKBP8Q14318 412 aa14.64□□□□□ -0.07
NT5C3A-206ENST00000409787 STAG3Q9UJ98 1225 aa14.63□□□□□ -0.07
NT5C3A-206ENST00000409787 SPDYE4A6NLX3 237 aa14.61□□□□□ -0.07
NT5C3A-206ENST00000409787 OTUD5Q96G74 571 aa14.61□□□□□ -0.07
NT5C3A-206ENST00000409787 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
NT5C3A-206ENST00000409787 POTEB2H3BUK9 544 aa14.54□□□□□ -0.08
NT5C3A-206ENST00000409787 PROM2Q8N271 834 aa14.54□□□□□ -0.08
NT5C3A-206ENST00000409787 PHF12Q96QT6 1004 aa14.52□□□□□ -0.09
NT5C3A-206ENST00000409787 POTEMA6NI47 508 aa14.48□□□□□ -0.09
NT5C3A-206ENST00000409787 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
NT5C3A-206ENST00000409787 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
NT5C3A-206ENST00000409787 POTEGQ6S5H5 508 aa14.42□□□□□ -0.1
NT5C3A-206ENST00000409787 METRNQ9UJH8 293 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms