RNA–Protein interactions for RNA: ENST00000394684.8

SGMS2-202, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 6,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-202ENST00000394684 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
SGMS2-202ENST00000394684 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
SGMS2-202ENST00000394684 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
SGMS2-202ENST00000394684 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
SGMS2-202ENST00000394684 NISCHQ9Y2I1 1504 aa13.88□□□□□ -0.19
SGMS2-202ENST00000394684 APLP2Q06481 763 aa13.87□□□□□ -0.19
SGMS2-202ENST00000394684 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
SGMS2-202ENST00000394684 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
SGMS2-202ENST00000394684 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
SGMS2-202ENST00000394684 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
SGMS2-202ENST00000394684 CCER1Q8TC90 406 aaPredicted RBP13.49□□□□□ -0.25
SGMS2-202ENST00000394684 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
SGMS2-202ENST00000394684 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
SGMS2-202ENST00000394684 PCGF6Q9BYE7 350 aa13.35□□□□□ -0.27
SGMS2-202ENST00000394684 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
SGMS2-202ENST00000394684 NEFLP07196 543 aa13.2□□□□□ -0.3
SGMS2-202ENST00000394684 MYT1LQ9UL68 1186 aa13.17□□□□□ -0.3
SGMS2-202ENST00000394684 UBTFP17480 764 aaKnown RBP13.08□□□□□ -0.32
SGMS2-202ENST00000394684 YTHDC1Q96MU7 727 aaKnown RBP13.05□□□□□ -0.32
SGMS2-202ENST00000394684 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
SGMS2-202ENST00000394684 MYT1Q01538 1121 aa13.03□□□□□ -0.32
SGMS2-202ENST00000394684 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
SGMS2-202ENST00000394684 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
SGMS2-202ENST00000394684 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
SGMS2-202ENST00000394684 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
SGMS2-202ENST00000394684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
SGMS2-202ENST00000394684 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
SGMS2-202ENST00000394684 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
SGMS2-202ENST00000394684 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
SGMS2-202ENST00000394684 ITGAEP38570 1179 aa12.82□□□□□ -0.36
SGMS2-202ENST00000394684 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
SGMS2-202ENST00000394684 CLSPNQ9HAW4 1339 aa12.73□□□□□ -0.37
SGMS2-202ENST00000394684 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
SGMS2-202ENST00000394684 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
SGMS2-202ENST00000394684 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
SGMS2-202ENST00000394684 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
SGMS2-202ENST00000394684 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
SGMS2-202ENST00000394684 BCANQ96GW7 911 aa12.45□□□□□ -0.42
SGMS2-202ENST00000394684 TRIM52Q96A61 297 aa12.43□□□□□ -0.42
SGMS2-202ENST00000394684 TRIM26Q12899 539 aaPredicted RBP12.42□□□□□ -0.42
SGMS2-202ENST00000394684 FAM50AQ14320 339 aaKnown RBP12.39□□□□□ -0.43
SGMS2-202ENST00000394684 ZNF326Q5BKZ1 582 aaKnown RBP12.36□□□□□ -0.43
SGMS2-202ENST00000394684 HRCP23327 699 aa12.34□□□□□ -0.43
SGMS2-202ENST00000394684 NEFMP07197 916 aa12.33□□□□□ -0.44
SGMS2-202ENST00000394684 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
SGMS2-202ENST00000394684 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
SGMS2-202ENST00000394684 FBLN2P98095 1184 aa12.29□□□□□ -0.44
SGMS2-202ENST00000394684 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
SGMS2-202ENST00000394684 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
SGMS2-202ENST00000394684 ESF1Q9H501 851 aaKnown RBP12.2□□□□□ -0.46
SGMS2-202ENST00000394684 ANP32CO43423 234 aa12.16□□□□□ -0.46
SGMS2-202ENST00000394684 DIEXFQ68CQ4 756 aaKnown RBP12.16□□□□□ -0.46
SGMS2-202ENST00000394684 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
SGMS2-202ENST00000394684 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
SGMS2-202ENST00000394684 ARID3CA6NKF2 412 aa12.09□□□□□ -0.47
SGMS2-202ENST00000394684 HSP90AA1P07900 732 aaKnown RBP12.07□□□□□ -0.48
SGMS2-202ENST00000394684 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
SGMS2-202ENST00000394684 A0A0G2JS52 829 aa12.06□□□□□ -0.48
SGMS2-202ENST00000394684 CHGAP10645 457 aaKnown RBP12.06□□□□□ -0.48
SGMS2-202ENST00000394684 ZNF777Q9ULD5 760 aaPredicted RBP12.04□□□□□ -0.48
SGMS2-202ENST00000394684 NPM2Q86SE8 214 aaKnown RBP12.04□□□□□ -0.48
SGMS2-202ENST00000394684 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
SGMS2-202ENST00000394684 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
SGMS2-202ENST00000394684 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
SGMS2-202ENST00000394684 ABCC9O60706 1549 aa12□□□□□ -0.49
SGMS2-202ENST00000394684 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
SGMS2-202ENST00000394684 P3H3Q8IVL6 736 aa11.97□□□□□ -0.49
SGMS2-202ENST00000394684 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
SGMS2-202ENST00000394684 UPF2Q9HAU5 1272 aaKnown RBP11.93□□□□□ -0.5
SGMS2-202ENST00000394684 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
SGMS2-202ENST00000394684 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
SGMS2-202ENST00000394684 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
SGMS2-202ENST00000394684 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
SGMS2-202ENST00000394684 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
SGMS2-202ENST00000394684 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
SGMS2-202ENST00000394684 ARXQ96QS3 562 aa11.82□□□□□ -0.52
SGMS2-202ENST00000394684 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
SGMS2-202ENST00000394684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.52
SGMS2-202ENST00000394684 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.79□□□□□ -0.52
SGMS2-202ENST00000394684 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
SGMS2-202ENST00000394684 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
SGMS2-202ENST00000394684 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
SGMS2-202ENST00000394684 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
SGMS2-202ENST00000394684 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.53
SGMS2-202ENST00000394684 GLIPR1L2Q4G1C9 344 aa11.73□□□□□ -0.53
SGMS2-202ENST00000394684 HNRNPUQ00839 825 aaKnown RBP eCLIP11.72□□□□□ -0.53
SGMS2-202ENST00000394684 FKBP8Q14318 412 aa11.71□□□□□ -0.53
SGMS2-202ENST00000394684 TONSLQ96HA7 1378 aa11.71□□□□□ -0.53
SGMS2-202ENST00000394684 TMC1Q8TDI8 760 aa11.71□□□□□ -0.54
SGMS2-202ENST00000394684 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
SGMS2-202ENST00000394684 NPHP1O15259 732 aa11.68□□□□□ -0.54
SGMS2-202ENST00000394684 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
SGMS2-202ENST00000394684 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
SGMS2-202ENST00000394684 NCLP19338 710 aaKnown RBP11.67□□□□□ -0.54
SGMS2-202ENST00000394684 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
SGMS2-202ENST00000394684 CCDC180Q9P1Z9 1646 aa11.66□□□□□ -0.54
SGMS2-202ENST00000394684 NBR1Q14596 966 aa11.65□□□□□ -0.54
SGMS2-202ENST00000394684 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
SGMS2-202ENST00000394684 CHIC2Q9UKJ5 165 aa11.65□□□□□ -0.54
SGMS2-202ENST00000394684 DDX10Q13206 875 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms