RNA–Protein interactions for RNA: ENST00000535809.1

LDHC-203, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-203ENST00000535809 AEBP2Q6ZN18 517 aaPredicted RBP16.17■□□□□ 0.18
LDHC-203ENST00000535809 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
LDHC-203ENST00000535809 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
LDHC-203ENST00000535809 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
LDHC-203ENST00000535809 NISCHQ9Y2I1 1504 aa13.28□□□□□ -0.28
LDHC-203ENST00000535809 FOXD1Q16676 465 aa12.95□□□□□ -0.34
LDHC-203ENST00000535809 ABCC9O60706 1549 aa12.79□□□□□ -0.36
LDHC-203ENST00000535809 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
LDHC-203ENST00000535809 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
LDHC-203ENST00000535809 MSH5O43196 834 aa12.25□□□□□ -0.45
LDHC-203ENST00000535809 CCDC180Q9P1Z9 1646 aa12.23□□□□□ -0.45
LDHC-203ENST00000535809 PIAS4Q8N2W9 510 aaPredicted RBP11.95□□□□□ -0.5
LDHC-203ENST00000535809 RB1CC1Q8TDY2 1594 aa11.9□□□□□ -0.5
LDHC-203ENST00000535809 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
LDHC-203ENST00000535809 PPP6R1Q9UPN7 881 aa11.84□□□□□ -0.51
LDHC-203ENST00000535809 PLPPR3Q6T4P5 718 aa11.78□□□□□ -0.52
LDHC-203ENST00000535809 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
LDHC-203ENST00000535809 ADRA2BP18089 450 aa11.74□□□□□ -0.53
LDHC-203ENST00000535809 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
LDHC-203ENST00000535809 NACADO15069 1562 aa11.66□□□□□ -0.54
LDHC-203ENST00000535809 BICRAQ9NZM4 1560 aa11.62□□□□□ -0.55
LDHC-203ENST00000535809 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
LDHC-203ENST00000535809 MYT1Q01538 1121 aa11.56□□□□□ -0.56
LDHC-203ENST00000535809 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
LDHC-203ENST00000535809 TTBK1Q5TCY1 1321 aaPredicted RBP11.41□□□□□ -0.58
LDHC-203ENST00000535809 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
LDHC-203ENST00000535809 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
LDHC-203ENST00000535809 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
LDHC-203ENST00000535809 SHROOM4Q9ULL8 1493 aa11.35□□□□□ -0.59
LDHC-203ENST00000535809 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
LDHC-203ENST00000535809 MYO15BQ96JP2 1530 aa11.28□□□□□ -0.6
LDHC-203ENST00000535809 CUX2O14529 1486 aa11.26□□□□□ -0.61
LDHC-203ENST00000535809 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
LDHC-203ENST00000535809 SCRIBQ14160 1630 aa11.13□□□□□ -0.63
LDHC-203ENST00000535809 ERCC6Q03468 1493 aa11.07□□□□□ -0.64
LDHC-203ENST00000535809 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
LDHC-203ENST00000535809 DCAF1Q9Y4B6 1507 aa10.92□□□□□ -0.66
LDHC-203ENST00000535809 MAPK8IP2Q13387 824 aaPredicted RBP10.91□□□□□ -0.66
LDHC-203ENST00000535809 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.66
LDHC-203ENST00000535809 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
LDHC-203ENST00000535809 NESP48681 1621 aa10.84□□□□□ -0.67
LDHC-203ENST00000535809 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
LDHC-203ENST00000535809 ERICH6Q7L0X2 663 aa10.76□□□□□ -0.69
LDHC-203ENST00000535809 DAXXQ9UER7 740 aaPredicted RBP10.75□□□□□ -0.69
LDHC-203ENST00000535809 NCAPD3P42695 1498 aa10.74□□□□□ -0.69
LDHC-203ENST00000535809 SCAF1Q9H7N4 1312 aaKnown RBP10.74□□□□□ -0.69
LDHC-203ENST00000535809 KIF21AQ7Z4S6 1674 aa10.72□□□□□ -0.69
LDHC-203ENST00000535809 CACNB1Q02641 598 aaPredicted RBP10.71□□□□□ -0.69
LDHC-203ENST00000535809 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.69
LDHC-203ENST00000535809 HMGXB3Q12766 1538 aa10.66□□□□□ -0.7
LDHC-203ENST00000535809 ATAD2BQ9ULI0 1458 aa10.65□□□□□ -0.7
LDHC-203ENST00000535809 LAMC3Q9Y6N6 1575 aa10.64□□□□□ -0.71
LDHC-203ENST00000535809 RIMBP3CA6NJZ7 1639 aa10.62□□□□□ -0.71
LDHC-203ENST00000535809 RIMBP3BA6NNM3 1639 aa10.62□□□□□ -0.71
LDHC-203ENST00000535809 RIMBP3Q9UFD9 1639 aa10.62□□□□□ -0.71
LDHC-203ENST00000535809 APLP2Q06481 763 aa10.6□□□□□ -0.71
LDHC-203ENST00000535809 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
LDHC-203ENST00000535809 WDR62O43379 1518 aa10.56□□□□□ -0.72
LDHC-203ENST00000535809 PDS5BQ9NTI5 1447 aa10.55□□□□□ -0.72
LDHC-203ENST00000535809 MRC2Q9UBG0 1479 aa10.55□□□□□ -0.72
LDHC-203ENST00000535809 SMARCA4P51532 1647 aa10.53□□□□□ -0.72
LDHC-203ENST00000535809 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
LDHC-203ENST00000535809 ARHGEF11O15085 1522 aa10.5□□□□□ -0.73
LDHC-203ENST00000535809 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.73
LDHC-203ENST00000535809 RNF39Q9H2S5 420 aa10.43□□□□□ -0.74
LDHC-203ENST00000535809 PEG3Q9GZU2 1588 aa10.41□□□□□ -0.74
LDHC-203ENST00000535809 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
LDHC-203ENST00000535809 HOXD11P31277 338 aaPredicted RBP10.39□□□□□ -0.75
LDHC-203ENST00000535809 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
LDHC-203ENST00000535809 CYB5RLQ6IPT4 315 aa10.38□□□□□ -0.75
LDHC-203ENST00000535809 CADPSQ9ULU8 1353 aa10.38□□□□□ -0.75
LDHC-203ENST00000535809 ARAP1Q96P48 1450 aa10.37□□□□□ -0.75
LDHC-203ENST00000535809 FANCD2Q9BXW9 1451 aa10.3□□□□□ -0.76
LDHC-203ENST00000535809 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
LDHC-203ENST00000535809 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
LDHC-203ENST00000535809 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
LDHC-203ENST00000535809 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
LDHC-203ENST00000535809 C1QBPQ07021 282 aaKnown RBP10.26□□□□□ -0.77
LDHC-203ENST00000535809 CHD1O14646 1710 aa10.26□□□□□ -0.77
LDHC-203ENST00000535809 ZNF608Q9ULD9 1512 aaPredicted RBP10.25□□□□□ -0.77
LDHC-203ENST00000535809 MROH2BQ7Z745 1585 aa10.25□□□□□ -0.77
LDHC-203ENST00000535809 RSF1Q96T23 1441 aaPredicted RBP10.21□□□□□ -0.78
LDHC-203ENST00000535809 EIF4G3O43432 1585 aaKnown RBP10.21□□□□□ -0.78
LDHC-203ENST00000535809 RNF216Q9NWF9 866 aaPredicted RBP10.2□□□□□ -0.78
LDHC-203ENST00000535809 NCBP3Q53F19 620 aaKnown RBP10.19□□□□□ -0.78
LDHC-203ENST00000535809 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
LDHC-203ENST00000535809 IFT140Q96RY7 1462 aa10.17□□□□□ -0.78
LDHC-203ENST00000535809 CFTRP13569 1480 aa10.16□□□□□ -0.78
LDHC-203ENST00000535809 WIZO95785 1651 aa10.12□□□□□ -0.79
LDHC-203ENST00000535809 PRDM2Q13029 1718 aa10.1□□□□□ -0.79
LDHC-203ENST00000535809 CLASP1Q7Z460 1538 aa10.09□□□□□ -0.79
LDHC-203ENST00000535809 ARXQ96QS3 562 aa10.08□□□□□ -0.8
LDHC-203ENST00000535809 FBLN2P98095 1184 aa10.06□□□□□ -0.8
LDHC-203ENST00000535809 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
LDHC-203ENST00000535809 AQRO60306 1485 aaKnown RBP eCLIP10.04□□□□□ -0.8
LDHC-203ENST00000535809 TARBP1Q13395 1621 aaKnown RBP10.03□□□□□ -0.8
LDHC-203ENST00000535809 SYNJ1O43426 1573 aa10.01□□□□□ -0.81
LDHC-203ENST00000535809 GAPVD1Q14C86 1478 aa10□□□□□ -0.81
LDHC-203ENST00000535809 KIF13AQ9H1H9 1805 aa10□□□□□ -0.81
LDHC-203ENST00000535809 KDM4FA0A1W2PPD8 638 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms