RNA–Protein interactions for RNA: ENST00000580952.2

RN7SL708P-201, Transcript of RNA, 7SL, cytoplasmic 708, pseudogene, humanhuman

BASIC

Gene RN7SL708P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL708P-201ENST00000580952 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
RN7SL708P-201ENST00000580952 ABCC9O60706 1549 aa12.52□□□□□ -0.41
RN7SL708P-201ENST00000580952 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
RN7SL708P-201ENST00000580952 DNAJC5BQ9UF47 199 aa12.09□□□□□ -0.47
RN7SL708P-201ENST00000580952 RB1CC1Q8TDY2 1594 aa11.78□□□□□ -0.52
RN7SL708P-201ENST00000580952 NACADO15069 1562 aa11.62□□□□□ -0.55
RN7SL708P-201ENST00000580952 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
RN7SL708P-201ENST00000580952 UNC13AQ9UPW8 1703 aa11.55□□□□□ -0.56
RN7SL708P-201ENST00000580952 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
RN7SL708P-201ENST00000580952 DCAF8L2P0C7V8 631 aa11.47□□□□□ -0.57
RN7SL708P-201ENST00000580952 MYO15BQ96JP2 1530 aa11.38□□□□□ -0.59
RN7SL708P-201ENST00000580952 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
RN7SL708P-201ENST00000580952 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
RN7SL708P-201ENST00000580952 CC2D2AQ9P2K1 1620 aa11.31□□□□□ -0.6
RN7SL708P-201ENST00000580952 SHROOM4Q9ULL8 1493 aa11.26□□□□□ -0.61
RN7SL708P-201ENST00000580952 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
RN7SL708P-201ENST00000580952 DCAF1Q9Y4B6 1507 aa11.11□□□□□ -0.63
RN7SL708P-201ENST00000580952 SCRIBQ14160 1630 aa11.09□□□□□ -0.63
RN7SL708P-201ENST00000580952 ZCCHC6Q5VYS8 1495 aaKnown RBP11.09□□□□□ -0.63
RN7SL708P-201ENST00000580952 CUX2O14529 1486 aa10.93□□□□□ -0.66
RN7SL708P-201ENST00000580952 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
RN7SL708P-201ENST00000580952 NCAPD3P42695 1498 aa10.75□□□□□ -0.69
RN7SL708P-201ENST00000580952 NESP48681 1621 aa10.68□□□□□ -0.7
RN7SL708P-201ENST00000580952 ATAD2BQ9ULI0 1458 aa10.67□□□□□ -0.7
RN7SL708P-201ENST00000580952 THOC2Q8NI27 1593 aaKnown RBP10.64□□□□□ -0.71
RN7SL708P-201ENST00000580952 TRIM41Q8WV44 630 aa10.63□□□□□ -0.71
RN7SL708P-201ENST00000580952 HMGXB3Q12766 1538 aa10.63□□□□□ -0.71
RN7SL708P-201ENST00000580952 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
RN7SL708P-201ENST00000580952 SMARCA4P51532 1647 aa10.57□□□□□ -0.72
RN7SL708P-201ENST00000580952 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
RN7SL708P-201ENST00000580952 KIF21AQ7Z4S6 1674 aa10.53□□□□□ -0.72
RN7SL708P-201ENST00000580952 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
RN7SL708P-201ENST00000580952 PDS5BQ9NTI5 1447 aa10.49□□□□□ -0.73
RN7SL708P-201ENST00000580952 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
RN7SL708P-201ENST00000580952 BAZ1AQ9NRL2 1556 aaPredicted RBP10.46□□□□□ -0.74
RN7SL708P-201ENST00000580952 WDR62O43379 1518 aa10.41□□□□□ -0.74
RN7SL708P-201ENST00000580952 MRC2Q9UBG0 1479 aa10.41□□□□□ -0.74
RN7SL708P-201ENST00000580952 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.74
RN7SL708P-201ENST00000580952 OSCARQ8IYS5 282 aa10.38□□□□□ -0.75
RN7SL708P-201ENST00000580952 MROH2BQ7Z745 1585 aa10.38□□□□□ -0.75
RN7SL708P-201ENST00000580952 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
RN7SL708P-201ENST00000580952 RIMBP3CA6NJZ7 1639 aa10.29□□□□□ -0.76
RN7SL708P-201ENST00000580952 RIMBP3BA6NNM3 1639 aa10.29□□□□□ -0.76
RN7SL708P-201ENST00000580952 RIMBP3Q9UFD9 1639 aa10.29□□□□□ -0.76
RN7SL708P-201ENST00000580952 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.77
RN7SL708P-201ENST00000580952 WIZO95785 1651 aa10.24□□□□□ -0.77
RN7SL708P-201ENST00000580952 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
RN7SL708P-201ENST00000580952 CFTRP13569 1480 aa10.22□□□□□ -0.77
RN7SL708P-201ENST00000580952 ARHGEF11O15085 1522 aa10.21□□□□□ -0.78
RN7SL708P-201ENST00000580952 CYB5RLQ6IPT4 315 aa10.16□□□□□ -0.78
RN7SL708P-201ENST00000580952 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
RN7SL708P-201ENST00000580952 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
RN7SL708P-201ENST00000580952 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
RN7SL708P-201ENST00000580952 ARAP1Q96P48 1450 aa10.1□□□□□ -0.79
RN7SL708P-201ENST00000580952 PRDM2Q13029 1718 aa10.08□□□□□ -0.8
RN7SL708P-201ENST00000580952 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
RN7SL708P-201ENST00000580952 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
RN7SL708P-201ENST00000580952 CHD1O14646 1710 aa10.05□□□□□ -0.8
RN7SL708P-201ENST00000580952 AEBP2Q6ZN18 517 aaPredicted RBP10.05□□□□□ -0.8
RN7SL708P-201ENST00000580952 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
RN7SL708P-201ENST00000580952 RSF1Q96T23 1441 aaPredicted RBP10.05□□□□□ -0.8
RN7SL708P-201ENST00000580952 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.81
RN7SL708P-201ENST00000580952 ABCC8Q09428 1581 aa10□□□□□ -0.81
RN7SL708P-201ENST00000580952 TARBP1Q13395 1621 aaKnown RBP10□□□□□ -0.81
RN7SL708P-201ENST00000580952 FBLN2P98095 1184 aa9.98□□□□□ -0.81
RN7SL708P-201ENST00000580952 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
RN7SL708P-201ENST00000580952 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
RN7SL708P-201ENST00000580952 CLASP1Q7Z460 1538 aa9.94□□□□□ -0.82
RN7SL708P-201ENST00000580952 POLA1P09884 1462 aaPredicted RBP9.92□□□□□ -0.82
RN7SL708P-201ENST00000580952 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
RN7SL708P-201ENST00000580952 TDRD9Q8NDG6 1382 aaKnown RBP9.89□□□□□ -0.83
RN7SL708P-201ENST00000580952 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
RN7SL708P-201ENST00000580952 SNAPC4Q5SXM2 1469 aa9.88□□□□□ -0.83
RN7SL708P-201ENST00000580952 SOGA1O94964 1423 aa9.88□□□□□ -0.83
RN7SL708P-201ENST00000580952 CHMP7Q8WUX9 453 aaPredicted RBP9.87□□□□□ -0.83
RN7SL708P-201ENST00000580952 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
RN7SL708P-201ENST00000580952 GAPVD1Q14C86 1478 aa9.85□□□□□ -0.83
RN7SL708P-201ENST00000580952 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
RN7SL708P-201ENST00000580952 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
RN7SL708P-201ENST00000580952 GRIN2BQ13224 1484 aa9.82□□□□□ -0.84
RN7SL708P-201ENST00000580952 FGD5Q6ZNL6 1462 aa9.81□□□□□ -0.84
RN7SL708P-201ENST00000580952 ERCC6L2Q5T890 1561 aa9.77□□□□□ -0.85
RN7SL708P-201ENST00000580952 CUX1P39880 1505 aa9.77□□□□□ -0.85
RN7SL708P-201ENST00000580952 PBRM1Q86U86 1689 aa9.76□□□□□ -0.85
RN7SL708P-201ENST00000580952 KIF13AQ9H1H9 1805 aa9.75□□□□□ -0.85
RN7SL708P-201ENST00000580952 CEP170Q5SW79 1584 aa9.71□□□□□ -0.86
RN7SL708P-201ENST00000580952 ABCA5Q8WWZ7 1642 aa9.71□□□□□ -0.86
RN7SL708P-201ENST00000580952 GRIN2AQ12879 1464 aa9.69□□□□□ -0.86
RN7SL708P-201ENST00000580952 SHROOM2Q13796 1616 aa9.69□□□□□ -0.86
RN7SL708P-201ENST00000580952 ILDR1Q86SU0 546 aaPredicted RBP9.69□□□□□ -0.86
RN7SL708P-201ENST00000580952 ABCA10Q8WWZ4 1543 aa9.69□□□□□ -0.86
RN7SL708P-201ENST00000580952 NUP160Q12769 1436 aa9.68□□□□□ -0.86
RN7SL708P-201ENST00000580952 KDM4FA0A1W2PPD8 638 aa9.67□□□□□ -0.86
RN7SL708P-201ENST00000580952 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
RN7SL708P-201ENST00000580952 ABCC10Q5T3U5 1492 aa9.64□□□□□ -0.87
RN7SL708P-201ENST00000580952 FAM69CQ0P6D2 419 aa9.63□□□□□ -0.87
RN7SL708P-201ENST00000580952 FHAD1B1AJZ9 1412 aa9.61□□□□□ -0.87
RN7SL708P-201ENST00000580952 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
RN7SL708P-201ENST00000580952 DIP2BQ9P265 1576 aa9.59□□□□□ -0.87
RN7SL708P-201ENST00000580952 JPH4Q96JJ6 628 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms