RNA–Protein interactions for RNA: ENST00000397287.6

APOL3-203, Transcript of apolipoprotein L3, humanhuman

TSL 1 (best) BASIC

Gene APOL3, Length 3,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL3-203ENST00000397287 NISCHQ9Y2I1 1504 aa14.48□□□□□ -0.09
APOL3-203ENST00000397287 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.37
APOL3-203ENST00000397287 MYT1Q01538 1121 aa12.56□□□□□ -0.4
APOL3-203ENST00000397287 SHROOM4Q9ULL8 1493 aa12.51□□□□□ -0.41
APOL3-203ENST00000397287 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.42
APOL3-203ENST00000397287 HRCP23327 699 aa12.37□□□□□ -0.43
APOL3-203ENST00000397287 ZCCHC6Q5VYS8 1495 aaKnown RBP12.3□□□□□ -0.44
APOL3-203ENST00000397287 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
APOL3-203ENST00000397287 CCDC180Q9P1Z9 1646 aa12.2□□□□□ -0.46
APOL3-203ENST00000397287 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
APOL3-203ENST00000397287 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
APOL3-203ENST00000397287 DCAF1Q9Y4B6 1507 aa12.07□□□□□ -0.48
APOL3-203ENST00000397287 DCAF8L2P0C7V8 631 aa11.98□□□□□ -0.49
APOL3-203ENST00000397287 TTBK1Q5TCY1 1321 aaPredicted RBP11.95□□□□□ -0.5
APOL3-203ENST00000397287 PPARGC1BQ86YN6 1023 aaKnown RBP11.95□□□□□ -0.5
APOL3-203ENST00000397287 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
APOL3-203ENST00000397287 ZEB1P37275 1124 aaPredicted RBP11.9□□□□□ -0.51
APOL3-203ENST00000397287 LOC105371045A0A1W2PR82 267 aa11.84□□□□□ -0.51
APOL3-203ENST00000397287 ABCC9O60706 1549 aa11.65□□□□□ -0.54
APOL3-203ENST00000397287 TRIM41Q8WV44 630 aa11.64□□□□□ -0.55
APOL3-203ENST00000397287 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
APOL3-203ENST00000397287 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
APOL3-203ENST00000397287 RB1CC1Q8TDY2 1594 aa11.51□□□□□ -0.57
APOL3-203ENST00000397287 PRKCSHP14314 528 aaPredicted RBP11.49□□□□□ -0.57
APOL3-203ENST00000397287 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
APOL3-203ENST00000397287 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
APOL3-203ENST00000397287 SCRIBQ14160 1630 aa11.44□□□□□ -0.58
APOL3-203ENST00000397287 BCL11AQ9H165 835 aa11.43□□□□□ -0.58
APOL3-203ENST00000397287 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
APOL3-203ENST00000397287 ACIN1Q9UKV3 1341 aaKnown RBP11.4□□□□□ -0.59
APOL3-203ENST00000397287 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
APOL3-203ENST00000397287 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
APOL3-203ENST00000397287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
APOL3-203ENST00000397287 DIEXFQ68CQ4 756 aaKnown RBP11.3□□□□□ -0.6
APOL3-203ENST00000397287 NEUROD1Q13562 356 aa11.28□□□□□ -0.6
APOL3-203ENST00000397287 GTF3C3Q9Y5Q9 886 aa11.25□□□□□ -0.61
APOL3-203ENST00000397287 NACADO15069 1562 aa11.25□□□□□ -0.61
APOL3-203ENST00000397287 MROH2BQ7Z745 1585 aa11.23□□□□□ -0.61
APOL3-203ENST00000397287 WRNQ14191 1432 aaPredicted RBP eCLIP11.22□□□□□ -0.61
APOL3-203ENST00000397287 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
APOL3-203ENST00000397287 BAZ1AQ9NRL2 1556 aaPredicted RBP11.18□□□□□ -0.62
APOL3-203ENST00000397287 WIZO95785 1651 aa11.16□□□□□ -0.62
APOL3-203ENST00000397287 ZNF316A6NFI3 1004 aaPredicted RBP11.16□□□□□ -0.62
APOL3-203ENST00000397287 APLP2Q06481 763 aa11.15□□□□□ -0.62
APOL3-203ENST00000397287 EEA1Q15075 1411 aa11.14□□□□□ -0.63
APOL3-203ENST00000397287 CEP162Q5TB80 1403 aa11.13□□□□□ -0.63
APOL3-203ENST00000397287 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
APOL3-203ENST00000397287 EIF4G1Q04637 1599 aaKnown RBP11.12□□□□□ -0.63
APOL3-203ENST00000397287 TOP2AP11388 1531 aaKnown RBP11.07□□□□□ -0.64
APOL3-203ENST00000397287 UBTFP17480 764 aaKnown RBP11.06□□□□□ -0.64
APOL3-203ENST00000397287 CSRNP3Q8WYN3 585 aa11.06□□□□□ -0.64
APOL3-203ENST00000397287 CCDC88BA6NC98 1476 aa11.05□□□□□ -0.64
APOL3-203ENST00000397287 GOLGA3Q08378 1498 aa11.02□□□□□ -0.65
APOL3-203ENST00000397287 YTHDC1Q96MU7 727 aaKnown RBP11.02□□□□□ -0.65
APOL3-203ENST00000397287 ABCC8Q09428 1581 aa11.02□□□□□ -0.65
APOL3-203ENST00000397287 CLSPNQ9HAW4 1339 aa11□□□□□ -0.65
APOL3-203ENST00000397287 SOGA1O94964 1423 aa11□□□□□ -0.65
APOL3-203ENST00000397287 ANP32EQ9BTT0 268 aa10.99□□□□□ -0.65
APOL3-203ENST00000397287 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
APOL3-203ENST00000397287 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
APOL3-203ENST00000397287 MIER1Q8N108 512 aa10.96□□□□□ -0.65
APOL3-203ENST00000397287 SMARCA4P51532 1647 aa10.96□□□□□ -0.66
APOL3-203ENST00000397287 CEP164Q9UPV0 1460 aa10.94□□□□□ -0.66
APOL3-203ENST00000397287 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
APOL3-203ENST00000397287 CLIP1P30622 1438 aa10.89□□□□□ -0.67
APOL3-203ENST00000397287 VPS8Q8N3P4 1428 aa10.88□□□□□ -0.67
APOL3-203ENST00000397287 RUSC2Q8N2Y8 1516 aa10.88□□□□□ -0.67
APOL3-203ENST00000397287 KIF21BO75037 1637 aa10.88□□□□□ -0.67
APOL3-203ENST00000397287 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
APOL3-203ENST00000397287 SUPT16HQ9Y5B9 1047 aaKnown RBP10.76□□□□□ -0.69
APOL3-203ENST00000397287 DHX57Q6P158 1386 aaKnown RBP10.75□□□□□ -0.69
APOL3-203ENST00000397287 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
APOL3-203ENST00000397287 PEG3Q9GZU2 1588 aa10.74□□□□□ -0.69
APOL3-203ENST00000397287 RAPGEF2Q9Y4G8 1499 aa10.73□□□□□ -0.69
APOL3-203ENST00000397287 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.69
APOL3-203ENST00000397287 RANGAP1P46060 587 aaPredicted RBP10.69□□□□□ -0.7
APOL3-203ENST00000397287 UNC13AQ9UPW8 1703 aa10.69□□□□□ -0.7
APOL3-203ENST00000397287 ERICH3Q5RHP9 1530 aa10.68□□□□□ -0.7
APOL3-203ENST00000397287 RRBP1Q9P2E9 1410 aaKnown RBP10.66□□□□□ -0.7
APOL3-203ENST00000397287 TSHZ2Q9NRE2 1034 aa10.65□□□□□ -0.71
APOL3-203ENST00000397287 CUX2O14529 1486 aa10.64□□□□□ -0.71
APOL3-203ENST00000397287 TOP2BQ02880 1626 aa10.64□□□□□ -0.71
APOL3-203ENST00000397287 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
APOL3-203ENST00000397287 CCNB3Q8WWL7 1395 aa10.62□□□□□ -0.71
APOL3-203ENST00000397287 DAXXQ9UER7 740 aaPredicted RBP10.62□□□□□ -0.71
APOL3-203ENST00000397287 ARAP1Q96P48 1450 aa10.62□□□□□ -0.71
APOL3-203ENST00000397287 PRXQ9BXM0 1461 aa10.62□□□□□ -0.71
APOL3-203ENST00000397287 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
APOL3-203ENST00000397287 NEFLP07196 543 aa10.61□□□□□ -0.71
APOL3-203ENST00000397287 ANO8Q9HCE9 1232 aaPredicted RBP10.61□□□□□ -0.71
APOL3-203ENST00000397287 KANK4Q5T7N3 995 aaPredicted RBP10.6□□□□□ -0.71
APOL3-203ENST00000397287 BICRAQ9NZM4 1560 aa10.58□□□□□ -0.72
APOL3-203ENST00000397287 BIVM-ERCC5R4GMW8 1640 aa10.58□□□□□ -0.72
APOL3-203ENST00000397287 KIF27Q86VH2 1401 aa10.57□□□□□ -0.72
APOL3-203ENST00000397287 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
APOL3-203ENST00000397287 ITGAEP38570 1179 aa10.54□□□□□ -0.72
APOL3-203ENST00000397287 FKBP8Q14318 412 aa10.54□□□□□ -0.72
APOL3-203ENST00000397287 UBE2Q2Q8WVN8 375 aa10.54□□□□□ -0.72
APOL3-203ENST00000397287 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
APOL3-203ENST00000397287 SETD5Q9C0A6 1442 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms