RNA–Protein interactions for RNA: ENST00000313608.12

MRPS23-201, Transcript of mitochondrial ribosomal protein S23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS23, Length 5,621 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS23-201ENST00000313608 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
MRPS23-201ENST00000313608 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
MRPS23-201ENST00000313608 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
MRPS23-201ENST00000313608 NISCHQ9Y2I1 1504 aa14.02□□□□□ -0.16
MRPS23-201ENST00000313608 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
MRPS23-201ENST00000313608 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
MRPS23-201ENST00000313608 FAM9AQ8IZU1 332 aaPredicted RBP13.5□□□□□ -0.25
MRPS23-201ENST00000313608 TTBK1Q5TCY1 1321 aaPredicted RBP13.49□□□□□ -0.25
MRPS23-201ENST00000313608 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
MRPS23-201ENST00000313608 APLP2Q06481 763 aa13.21□□□□□ -0.29
MRPS23-201ENST00000313608 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
MRPS23-201ENST00000313608 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
MRPS23-201ENST00000313608 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
MRPS23-201ENST00000313608 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
MRPS23-201ENST00000313608 PPARGC1BQ86YN6 1023 aaKnown RBP13.1□□□□□ -0.31
MRPS23-201ENST00000313608 ZEB1P37275 1124 aaPredicted RBP13.1□□□□□ -0.31
MRPS23-201ENST00000313608 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
MRPS23-201ENST00000313608 HRCP23327 699 aa13.03□□□□□ -0.32
MRPS23-201ENST00000313608 ERICH6Q7L0X2 663 aa12.97□□□□□ -0.33
MRPS23-201ENST00000313608 LOC105371045A0A1W2PR82 267 aa12.91□□□□□ -0.34
MRPS23-201ENST00000313608 TRIM26Q12899 539 aaPredicted RBP12.88□□□□□ -0.35
MRPS23-201ENST00000313608 UBTFP17480 764 aaKnown RBP12.88□□□□□ -0.35
MRPS23-201ENST00000313608 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.35
MRPS23-201ENST00000313608 CHIC1Q5VXU3 224 aa12.78□□□□□ -0.36
MRPS23-201ENST00000313608 NEFLP07196 543 aa12.75□□□□□ -0.37
MRPS23-201ENST00000313608 MYT1Q01538 1121 aa12.75□□□□□ -0.37
MRPS23-201ENST00000313608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
MRPS23-201ENST00000313608 ITGAEP38570 1179 aa12.62□□□□□ -0.39
MRPS23-201ENST00000313608 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
MRPS23-201ENST00000313608 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
MRPS23-201ENST00000313608 CNGB1Q14028 1251 aaPredicted RBP12.51□□□□□ -0.41
MRPS23-201ENST00000313608 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
MRPS23-201ENST00000313608 POLR3GLQ9BT43 218 aa12.47□□□□□ -0.41
MRPS23-201ENST00000313608 BCANQ96GW7 911 aa12.41□□□□□ -0.42
MRPS23-201ENST00000313608 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
MRPS23-201ENST00000313608 ACIN1Q9UKV3 1341 aaKnown RBP12.27□□□□□ -0.45
MRPS23-201ENST00000313608 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
MRPS23-201ENST00000313608 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
MRPS23-201ENST00000313608 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
MRPS23-201ENST00000313608 RTL5Q5HYW3 569 aaPredicted RBP12.19□□□□□ -0.46
MRPS23-201ENST00000313608 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
MRPS23-201ENST00000313608 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
MRPS23-201ENST00000313608 CLSPNQ9HAW4 1339 aa12.07□□□□□ -0.48
MRPS23-201ENST00000313608 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
MRPS23-201ENST00000313608 ANP32CO43423 234 aa12.06□□□□□ -0.48
MRPS23-201ENST00000313608 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
MRPS23-201ENST00000313608 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
MRPS23-201ENST00000313608 ZNF326Q5BKZ1 582 aaKnown RBP12.02□□□□□ -0.49
MRPS23-201ENST00000313608 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
MRPS23-201ENST00000313608 FKBP8Q14318 412 aa11.97□□□□□ -0.49
MRPS23-201ENST00000313608 DCAF1Q9Y4B6 1507 aa11.94□□□□□ -0.5
MRPS23-201ENST00000313608 MYO15BQ96JP2 1530 aa11.94□□□□□ -0.5
MRPS23-201ENST00000313608 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
MRPS23-201ENST00000313608 NPM2Q86SE8 214 aaKnown RBP11.91□□□□□ -0.5
MRPS23-201ENST00000313608 ABCC9O60706 1549 aa11.91□□□□□ -0.5
MRPS23-201ENST00000313608 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
MRPS23-201ENST00000313608 ARID3CA6NKF2 412 aa11.88□□□□□ -0.51
MRPS23-201ENST00000313608 MIER1Q8N108 512 aa11.88□□□□□ -0.51
MRPS23-201ENST00000313608 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
MRPS23-201ENST00000313608 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
MRPS23-201ENST00000313608 ANP32AP39687 249 aaKnown RBP11.83□□□□□ -0.52
MRPS23-201ENST00000313608 HNRNPUQ00839 825 aaKnown RBP eCLIP11.82□□□□□ -0.52
MRPS23-201ENST00000313608 IRX6P78412 446 aaPredicted RBP11.8□□□□□ -0.52
MRPS23-201ENST00000313608 NBR1Q14596 966 aa11.8□□□□□ -0.52
MRPS23-201ENST00000313608 HIRIP3Q9BW71 556 aaPredicted RBP11.79□□□□□ -0.52
MRPS23-201ENST00000313608 EIF5BO60841 1220 aaKnown RBP11.78□□□□□ -0.52
MRPS23-201ENST00000313608 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
MRPS23-201ENST00000313608 CANXP27824 592 aaKnown RBP11.75□□□□□ -0.53
MRPS23-201ENST00000313608 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
MRPS23-201ENST00000313608 TONSLQ96HA7 1378 aa11.7□□□□□ -0.54
MRPS23-201ENST00000313608 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
MRPS23-201ENST00000313608 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
MRPS23-201ENST00000313608 FBLN2P98095 1184 aa11.68□□□□□ -0.54
MRPS23-201ENST00000313608 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
MRPS23-201ENST00000313608 ARXQ96QS3 562 aa11.65□□□□□ -0.54
MRPS23-201ENST00000313608 ZCCHC6Q5VYS8 1495 aaKnown RBP11.65□□□□□ -0.54
MRPS23-201ENST00000313608 CCDC136Q96JN2 1154 aa11.64□□□□□ -0.55
MRPS23-201ENST00000313608 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
MRPS23-201ENST00000313608 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
MRPS23-201ENST00000313608 MRS2Q9HD23 443 aa11.61□□□□□ -0.55
MRPS23-201ENST00000313608 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
MRPS23-201ENST00000313608 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.55
MRPS23-201ENST00000313608 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
MRPS23-201ENST00000313608 TMC1Q8TDI8 760 aa11.55□□□□□ -0.56
MRPS23-201ENST00000313608 CLIP1P30622 1438 aa11.53□□□□□ -0.56
MRPS23-201ENST00000313608 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.56
MRPS23-201ENST00000313608 CEP162Q5TB80 1403 aa11.52□□□□□ -0.57
MRPS23-201ENST00000313608 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
MRPS23-201ENST00000313608 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
MRPS23-201ENST00000313608 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
MRPS23-201ENST00000313608 NEFMP07197 916 aa11.47□□□□□ -0.57
MRPS23-201ENST00000313608 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.57
MRPS23-201ENST00000313608 UPF2Q9HAU5 1272 aaKnown RBP11.46□□□□□ -0.57
MRPS23-201ENST00000313608 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
MRPS23-201ENST00000313608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.584e-7■■■■□ 23.1
MRPS23-201ENST00000313608 SIN3AQ96ST3 1273 aa11.45□□□□□ -0.58
MRPS23-201ENST00000313608 ANP32BQ92688 251 aaKnown RBP11.44□□□□□ -0.58
MRPS23-201ENST00000313608 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
MRPS23-201ENST00000313608 RSF1Q96T23 1441 aaPredicted RBP11.42□□□□□ -0.58
MRPS23-201ENST00000313608 LAS1LQ9Y4W2 734 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms