Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.36□□□□□ -0.27
SNCGO76070 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SNCGO76070 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.36□□□□□ -0.27
SNCGO76070 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
SNCGO76070 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SNCGO76070 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.36□□□□□ -0.27
SNCGO76070 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SNCGO76070 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.35□□□□□ -0.27
SNCGO76070 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SNCGO76070 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
SNCGO76070 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SNCGO76070 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.35□□□□□ -0.27
SNCGO76070 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC13.35□□□□□ -0.27
SNCGO76070 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 AC079089.2-201ENST00000531211 1277 ntBASIC13.35□□□□□ -0.27
SNCGO76070 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SNCGO76070 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.35□□□□□ -0.27
SNCGO76070 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
SNCGO76070 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SNCGO76070 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SNCGO76070 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SNCGO76070 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.35□□□□□ -0.27
SNCGO76070 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SNCGO76070 AC073314.1-201ENST00000568729 2216 ntBASIC13.35□□□□□ -0.27
SNCGO76070 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNCGO76070 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SNCGO76070 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.34□□□□□ -0.27
SNCGO76070 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.34□□□□□ -0.27
SNCGO76070 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.34□□□□□ -0.27
SNCGO76070 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SNCGO76070 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
SNCGO76070 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SNCGO76070 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 AL356309.3-201ENST00000624132 1934 ntBASIC13.34□□□□□ -0.27
SNCGO76070 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.34□□□□□ -0.27
SNCGO76070 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
SNCGO76070 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SNCGO76070 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SNCGO76070 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
SNCGO76070 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNCGO76070 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
SNCGO76070 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.33□□□□□ -0.27
SNCGO76070 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SNCGO76070 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNCGO76070 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SNCGO76070 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNCGO76070 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.33□□□□□ -0.27
SNCGO76070 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNCGO76070 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNCGO76070 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNCGO76070 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCGO76070 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms