RNA–Protein interactions for RNA: ENST00000215743.7

MMP11-201, Transcript of matrix metallopeptidase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP11, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-201ENST00000215743 NISCHQ9Y2I1 1504 aa42.44■■■■■ 4.38
MMP11-201ENST00000215743 CCDC180Q9P1Z9 1646 aa36.36■■■■□ 3.41
MMP11-201ENST00000215743 ZCCHC6Q5VYS8 1495 aaKnown RBP35.82■■■■□ 3.32
MMP11-201ENST00000215743 SHROOM4Q9ULL8 1493 aa35.82■■■■□ 3.32
MMP11-201ENST00000215743 DCAF8L2P0C7V8 631 aa35.29■■■■□ 3.24
MMP11-201ENST00000215743 SUPT5HO00267 1087 aaKnown RBP34.86■■■■□ 3.17
MMP11-201ENST00000215743 DCAF1Q9Y4B6 1507 aa34.82■■■■□ 3.17
MMP11-201ENST00000215743 ABCC9O60706 1549 aa34.06■■■■□ 3.04
MMP11-201ENST00000215743 SCRIBQ14160 1630 aa34■■■■□ 3.03
MMP11-201ENST00000215743 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
MMP11-201ENST00000215743 NACADO15069 1562 aa33.7■■■□□ 2.99
MMP11-201ENST00000215743 CHIC1Q5VXU3 224 aa33.64■■■□□ 2.98
MMP11-201ENST00000215743 RSF1Q96T23 1441 aaPredicted RBP33.37■■■□□ 2.93
MMP11-201ENST00000215743 RB1CC1Q8TDY2 1594 aa33.27■■■□□ 2.92
MMP11-201ENST00000215743 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
MMP11-201ENST00000215743 MROH2BQ7Z745 1585 aa32.97■■■□□ 2.87
MMP11-201ENST00000215743 WIZO95785 1651 aa32.78■■■□□ 2.84
MMP11-201ENST00000215743 UNC13AQ9UPW8 1703 aa32.77■■■□□ 2.84
MMP11-201ENST00000215743 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
MMP11-201ENST00000215743 LOC105371045A0A1W2PR82 267 aa32.61■■■□□ 2.81
MMP11-201ENST00000215743 TRIM41Q8WV44 630 aa32.51■■■□□ 2.8
MMP11-201ENST00000215743 SMARCA4P51532 1647 aa32.45■■■□□ 2.78
MMP11-201ENST00000215743 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
MMP11-201ENST00000215743 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
MMP11-201ENST00000215743 TOP2AP11388 1531 aaKnown RBP32.27■■■□□ 2.76
MMP11-201ENST00000215743 FAM9AQ8IZU1 332 aaPredicted RBP32.24■■■□□ 2.75
MMP11-201ENST00000215743 EIF4G1Q04637 1599 aaKnown RBP32.14■■■□□ 2.74
MMP11-201ENST00000215743 PCGF6Q9BYE7 350 aa32.1■■■□□ 2.73
MMP11-201ENST00000215743 CCDC88BA6NC98 1476 aa32.09■■■□□ 2.73
MMP11-201ENST00000215743 SMARCA2P51531 1590 aa32.08■■■□□ 2.73
MMP11-201ENST00000215743 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
MMP11-201ENST00000215743 ABCC8Q09428 1581 aa31.88■■■□□ 2.69
MMP11-201ENST00000215743 PEG3Q9GZU2 1588 aa31.83■■■□□ 2.69
MMP11-201ENST00000215743 HRCP23327 699 aa31.74■■■□□ 2.67
MMP11-201ENST00000215743 ATAD2BQ9ULI0 1458 aa31.71■■■□□ 2.67
MMP11-201ENST00000215743 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
MMP11-201ENST00000215743 TRIM26Q12899 539 aaPredicted RBP31.6■■■□□ 2.65
MMP11-201ENST00000215743 SOGA1O94964 1423 aa31.45■■■□□ 2.63
MMP11-201ENST00000215743 WRNQ14191 1432 aaPredicted RBP eCLIP31.39■■■□□ 2.61
MMP11-201ENST00000215743 RUSC2Q8N2Y8 1516 aa31.32■■■□□ 2.6
MMP11-201ENST00000215743 SYNJ1O43426 1573 aa31.27■■■□□ 2.6
MMP11-201ENST00000215743 EEA1Q15075 1411 aa31.21■■■□□ 2.59
MMP11-201ENST00000215743 PPARGC1BQ86YN6 1023 aaKnown RBP31.2■■■□□ 2.59
MMP11-201ENST00000215743 CSRNP3Q8WYN3 585 aa31.2■■■□□ 2.59
MMP11-201ENST00000215743 NCAPD3P42695 1498 aa31.16■■■□□ 2.58
MMP11-201ENST00000215743 HMGXB3Q12766 1538 aa31.15■■■□□ 2.58
MMP11-201ENST00000215743 CEP162Q5TB80 1403 aa31.08■■■□□ 2.57
MMP11-201ENST00000215743 UBTFP17480 764 aaKnown RBP31.05■■■□□ 2.56
MMP11-201ENST00000215743 TNIKQ9UKE5 1360 aa31.05■■■□□ 2.56
MMP11-201ENST00000215743 GOLGA3Q08378 1498 aa31■■■□□ 2.55
MMP11-201ENST00000215743 TOP2BQ02880 1626 aa30.93■■■□□ 2.54
MMP11-201ENST00000215743 CEP164Q9UPV0 1460 aa30.87■■■□□ 2.53
MMP11-201ENST00000215743 KIF21BO75037 1637 aa30.84■■■□□ 2.53
MMP11-201ENST00000215743 TTBK1Q5TCY1 1321 aaPredicted RBP30.84■■■□□ 2.53
MMP11-201ENST00000215743 BIVM-ERCC5R4GMW8 1640 aa30.83■■■□□ 2.53
MMP11-201ENST00000215743 CFTRP13569 1480 aa30.78■■■□□ 2.52
MMP11-201ENST00000215743 CUX1P39880 1505 aa30.73■■■□□ 2.51
MMP11-201ENST00000215743 RAPGEF2Q9Y4G8 1499 aa30.72■■■□□ 2.51
MMP11-201ENST00000215743 CC2D2AQ9P2K1 1620 aa30.68■■■□□ 2.5
MMP11-201ENST00000215743 ZEB1P37275 1124 aaPredicted RBP30.67■■■□□ 2.5
MMP11-201ENST00000215743 CLIP1P30622 1438 aa30.61■■■□□ 2.49
MMP11-201ENST00000215743 RANGAP1P46060 587 aaPredicted RBP30.59■■■□□ 2.49
MMP11-201ENST00000215743 PRDM2Q13029 1718 aa30.57■■■□□ 2.48
MMP11-201ENST00000215743 CADPSQ9ULU8 1353 aa30.53■■■□□ 2.48
MMP11-201ENST00000215743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.47■■■□□ 2.47
MMP11-201ENST00000215743 KIF27Q86VH2 1401 aa30.46■■■□□ 2.47
MMP11-201ENST00000215743 PRXQ9BXM0 1461 aa30.46■■■□□ 2.47
MMP11-201ENST00000215743 ERICH3Q5RHP9 1530 aa30.42■■■□□ 2.46
MMP11-201ENST00000215743 VPS8Q8N3P4 1428 aa30.41■■■□□ 2.46
MMP11-201ENST00000215743 CCER1Q8TC90 406 aaPredicted RBP30.35■■■□□ 2.45
MMP11-201ENST00000215743 CUX2O14529 1486 aa30.29■■■□□ 2.44
MMP11-201ENST00000215743 FGD5Q6ZNL6 1462 aa30.27■■■□□ 2.44
MMP11-201ENST00000215743 FANCD2Q9BXW9 1451 aa30.26■■■□□ 2.44
MMP11-201ENST00000215743 APLP2Q06481 763 aa30.25■■■□□ 2.43
MMP11-201ENST00000215743 NESP48681 1621 aa30.21■■■□□ 2.43
MMP11-201ENST00000215743 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
MMP11-201ENST00000215743 IGF1RP08069 1367 aa30.14■■■□□ 2.42
MMP11-201ENST00000215743 HNRNPUL2Q1KMD3 747 aaKnown RBP30.07■■■□□ 2.4
MMP11-201ENST00000215743 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
MMP11-201ENST00000215743 CARMIL1Q5VZK9 1371 aa30.02■■■□□ 2.4
MMP11-201ENST00000215743 RAD54L2Q9Y4B4 1467 aa30.02■■■□□ 2.4
MMP11-201ENST00000215743 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
MMP11-201ENST00000215743 ARHGAP35Q9NRY4 1499 aa30.01■■■□□ 2.39
MMP11-201ENST00000215743 DNAJC5BQ9UF47 199 aa29.98■■■□□ 2.39
MMP11-201ENST00000215743 POLA1P09884 1462 aaPredicted RBP29.97■■■□□ 2.39
MMP11-201ENST00000215743 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
MMP11-201ENST00000215743 KANK4Q5T7N3 995 aaPredicted RBP29.93■■■□□ 2.38
MMP11-201ENST00000215743 ABCA10Q8WWZ4 1543 aa29.89■■■□□ 2.38
MMP11-201ENST00000215743 URB2Q14146 1524 aaKnown RBP29.85■■■□□ 2.37
MMP11-201ENST00000215743 PDS5BQ9NTI5 1447 aa29.75■■■□□ 2.35
MMP11-201ENST00000215743 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
MMP11-201ENST00000215743 P3H3Q8IVL6 736 aa29.7■■■□□ 2.34
MMP11-201ENST00000215743 WDR97A6NE52 1622 aa29.69■■■□□ 2.34
MMP11-201ENST00000215743 CUL7Q14999 1698 aa29.67■■■□□ 2.34
MMP11-201ENST00000215743 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
MMP11-201ENST00000215743 RRBP1Q9P2E9 1410 aaKnown RBP29.61■■■□□ 2.33
MMP11-201ENST00000215743 TIAM1Q13009 1591 aa29.61■■■□□ 2.33
MMP11-201ENST00000215743 ABCA5Q8WWZ7 1642 aa29.58■■■□□ 2.33
MMP11-201ENST00000215743 FHOD3Q2V2M9 1422 aa29.58■■■□□ 2.33
MMP11-201ENST00000215743 CTTNBP2Q8WZ74 1663 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms