Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC197Q8NCU1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC197Q8NCU1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 AC009237.14-201ENST00000609975 1594 ntBASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC197Q8NCU1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC197Q8NCU1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms