Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC32.46■■■□□ 2.79
CHD1O14646 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1O14646 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC32.46■■■□□ 2.79
CHD1O14646 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1O14646 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC32.46■■■□□ 2.79
CHD1O14646 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1O14646 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
CHD1O14646 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC32.46■■■□□ 2.79
CHD1O14646 AC008040.2-201ENST00000461049 708 ntBASIC32.46■■■□□ 2.79
CHD1O14646 AL031008.1-201ENST00000619963 541 ntBASIC32.46■■■□□ 2.79
CHD1O14646 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CHD1O14646 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC32.45■■■□□ 2.79
CHD1O14646 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC32.45■■■□□ 2.79
CHD1O14646 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC32.45■■■□□ 2.79
CHD1O14646 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CHD1O14646 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
CHD1O14646 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC32.45■■■□□ 2.78
CHD1O14646 SPDYE15P-201ENST00000424157 909 ntBASIC32.45■■■□□ 2.78
CHD1O14646 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC32.45■■■□□ 2.78
CHD1O14646 TSPY17P-201ENST00000450329 467 ntBASIC32.45■■■□□ 2.78
CHD1O14646 LY6E-213ENST00000522528 606 ntTSL 3 BASIC32.45■■■□□ 2.78
CHD1O14646 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC32.45■■■□□ 2.78
CHD1O14646 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.78
CHD1O14646 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CHD1O14646 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
CHD1O14646 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CHD1O14646 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC32.44■■■□□ 2.78
CHD1O14646 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC32.44■■■□□ 2.78
CHD1O14646 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
CHD1O14646 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CHD1O14646 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
CHD1O14646 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
CHD1O14646 SNX5-210ENST00000481323 562 ntTSL 3 BASIC32.43■■■□□ 2.78
CHD1O14646 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CHD1O14646 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC32.43■■■□□ 2.78
CHD1O14646 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CHD1O14646 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC32.43■■■□□ 2.78
CHD1O14646 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
CHD1O14646 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CHD1O14646 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
CHD1O14646 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC32.43■■■□□ 2.78
CHD1O14646 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC32.43■■■□□ 2.78
CHD1O14646 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC32.43■■■□□ 2.78
CHD1O14646 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CHD1O14646 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC32.42■■■□□ 2.78
CHD1O14646 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC32.42■■■□□ 2.78
CHD1O14646 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CHD1O14646 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC32.42■■■□□ 2.78
CHD1O14646 MIR3652-201ENST00000579335 131 ntBASIC32.42■■■□□ 2.78
CHD1O14646 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC32.42■■■□□ 2.78
CHD1O14646 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHD1O14646 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHD1O14646 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHD1O14646 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78
CHD1O14646 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC32.41■■■□□ 2.78
CHD1O14646 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC32.41■■■□□ 2.78
CHD1O14646 AC009078.2-202ENST00000463353 338 ntBASIC32.41■■■□□ 2.78
CHD1O14646 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC32.41■■■□□ 2.78
CHD1O14646 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC32.41■■■□□ 2.78
CHD1O14646 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CHD1O14646 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC32.41■■■□□ 2.78
CHD1O14646 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC32.41■■■□□ 2.78
CHD1O14646 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CHD1O14646 KRT8P20-201ENST00000423953 1409 ntBASIC32.41■■■□□ 2.78
CHD1O14646 UNC93B7-201ENST00000509439 705 ntBASIC32.4■■■□□ 2.78
CHD1O14646 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC32.4■■■□□ 2.78
CHD1O14646 AC092119.3-201ENST00000612618 583 ntBASIC32.4■■■□□ 2.78
CHD1O14646 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC32.4■■■□□ 2.78
CHD1O14646 MFF-203ENST00000349901 1716 ntTSL 2 BASIC32.4■■■□□ 2.78
CHD1O14646 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CHD1O14646 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
CHD1O14646 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CHD1O14646 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
CHD1O14646 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CHD1O14646 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CHD1O14646 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC32.39■■■□□ 2.78
CHD1O14646 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CHD1O14646 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CHD1O14646 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC32.39■■■□□ 2.78
CHD1O14646 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC32.39■■■□□ 2.77
CHD1O14646 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CHD1O14646 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CHD1O14646 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CHD1O14646 HLA-G-202ENST00000376815 851 ntBASIC32.38■■■□□ 2.77
CHD1O14646 HLA-G-203ENST00000376818 1127 ntBASIC32.38■■■□□ 2.77
CHD1O14646 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC32.38■■■□□ 2.77
CHD1O14646 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC32.38■■■□□ 2.77
CHD1O14646 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC32.38■■■□□ 2.77
CHD1O14646 AL512604.3-201ENST00000569583 964 ntBASIC32.38■■■□□ 2.77
CHD1O14646 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC32.38■■■□□ 2.77
CHD1O14646 HLA-A-209ENST00000638375 975 ntBASIC32.38■■■□□ 2.77
CHD1O14646 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CHD1O14646 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CHD1O14646 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CHD1O14646 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC32.37■■■□□ 2.77
CHD1O14646 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC32.37■■■□□ 2.77
CHD1O14646 STARP1-201ENST00000397973 869 ntBASIC32.37■■■□□ 2.77
CHD1O14646 AL845331.1-201ENST00000424978 1190 ntBASIC32.37■■■□□ 2.77
CHD1O14646 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC32.37■■■□□ 2.77
CHD1O14646 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms