RNA–Protein interactions for RNA: ENST00000399697.7

POLR1D-203, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 1 (best) BASIC

Gene POLR1D, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-203ENST00000399697 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.01
POLR1D-203ENST00000399697 CCDC180Q9P1Z9 1646 aa40.93■■■■■ 4.14
POLR1D-203ENST00000399697 ABCC9O60706 1549 aa39.54■■■■□ 3.92
POLR1D-203ENST00000399697 ZCCHC6Q5VYS8 1495 aaKnown RBP38.75■■■■□ 3.79
POLR1D-203ENST00000399697 DCAF8L2P0C7V8 631 aa38.65■■■■□ 3.78
POLR1D-203ENST00000399697 NACADO15069 1562 aa38.34■■■■□ 3.73
POLR1D-203ENST00000399697 DCAF1Q9Y4B6 1507 aa38.34■■■■□ 3.73
POLR1D-203ENST00000399697 MYO15BQ96JP2 1530 aa38.26■■■■□ 3.72
POLR1D-203ENST00000399697 RB1CC1Q8TDY2 1594 aa38.26■■■■□ 3.72
POLR1D-203ENST00000399697 SCRIBQ14160 1630 aa37.48■■■■□ 3.59
POLR1D-203ENST00000399697 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
POLR1D-203ENST00000399697 SHROOM4Q9ULL8 1493 aa37.14■■■■□ 3.54
POLR1D-203ENST00000399697 PABPN1Q86U42 306 aaKnown RBP eCLIP37.09■■■■□ 3.53
POLR1D-203ENST00000399697 BICRAQ9NZM4 1560 aa37.07■■■■□ 3.52
POLR1D-203ENST00000399697 CECR2Q9BXF3 1484 aa36.1■■■■□ 3.37
POLR1D-203ENST00000399697 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
POLR1D-203ENST00000399697 BAZ1AQ9NRL2 1556 aaPredicted RBP35.91■■■■□ 3.34
POLR1D-203ENST00000399697 SMARCA4P51532 1647 aa35.87■■■■□ 3.33
POLR1D-203ENST00000399697 CC2D2AQ9P2K1 1620 aa35.78■■■■□ 3.32
POLR1D-203ENST00000399697 MROH2BQ7Z745 1585 aa35.78■■■■□ 3.32
POLR1D-203ENST00000399697 DNAJC5BQ9UF47 199 aa35.73■■■■□ 3.31
POLR1D-203ENST00000399697 RSF1Q96T23 1441 aaPredicted RBP35.59■■■■□ 3.29
POLR1D-203ENST00000399697 ATAD2BQ9ULI0 1458 aa35.51■■■■□ 3.27
POLR1D-203ENST00000399697 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
POLR1D-203ENST00000399697 PEG3Q9GZU2 1588 aa35.46■■■■□ 3.27
POLR1D-203ENST00000399697 WIZO95785 1651 aa35.46■■■■□ 3.27
POLR1D-203ENST00000399697 NCAPD3P42695 1498 aa35.37■■■■□ 3.25
POLR1D-203ENST00000399697 BAZ1BQ9UIG0 1483 aaKnown RBP35.27■■■■□ 3.24
POLR1D-203ENST00000399697 SUPT5HO00267 1087 aaKnown RBP35.27■■■■□ 3.24
POLR1D-203ENST00000399697 HMGXB3Q12766 1538 aa35.25■■■■□ 3.23
POLR1D-203ENST00000399697 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
POLR1D-203ENST00000399697 CCDC88BA6NC98 1476 aa34.67■■■■□ 3.14
POLR1D-203ENST00000399697 NESP48681 1621 aa34.4■■■■□ 3.1
POLR1D-203ENST00000399697 CADPSQ9ULU8 1353 aa34.4■■■■□ 3.1
POLR1D-203ENST00000399697 LAMC3Q9Y6N6 1575 aa34.35■■■■□ 3.09
POLR1D-203ENST00000399697 CFTRP13569 1480 aa34.32■■■■□ 3.08
POLR1D-203ENST00000399697 PRDM2Q13029 1718 aa34.14■■■■□ 3.06
POLR1D-203ENST00000399697 PDS5BQ9NTI5 1447 aa34.12■■■■□ 3.05
POLR1D-203ENST00000399697 ERCC6Q03468 1493 aa34.04■■■■□ 3.04
POLR1D-203ENST00000399697 FANCD2Q9BXW9 1451 aa34.02■■■■□ 3.04
POLR1D-203ENST00000399697 KIF21AQ7Z4S6 1674 aa34.02■■■■□ 3.04
POLR1D-203ENST00000399697 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
POLR1D-203ENST00000399697 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
POLR1D-203ENST00000399697 THOC2Q8NI27 1593 aaKnown RBP33.7■■■□□ 2.98
POLR1D-203ENST00000399697 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
POLR1D-203ENST00000399697 URB2Q14146 1524 aaKnown RBP33.64■■■□□ 2.98
POLR1D-203ENST00000399697 WDR62O43379 1518 aa33.58■■■□□ 2.97
POLR1D-203ENST00000399697 WRNQ14191 1432 aaPredicted RBP eCLIP33.55■■■□□ 2.96
POLR1D-203ENST00000399697 DNMBPQ6XZF7 1577 aa33.54■■■□□ 2.96
POLR1D-203ENST00000399697 TOPBP1Q92547 1522 aa33.54■■■□□ 2.96
POLR1D-203ENST00000399697 CUX1P39880 1505 aa33.52■■■□□ 2.96
POLR1D-203ENST00000399697 SYNJ1O43426 1573 aa33.44■■■□□ 2.94
POLR1D-203ENST00000399697 TOP2BQ02880 1626 aa33.4■■■□□ 2.94
POLR1D-203ENST00000399697 BIVM-ERCC5R4GMW8 1640 aa33.38■■■□□ 2.93
POLR1D-203ENST00000399697 CUX2O14529 1486 aa33.37■■■□□ 2.93
POLR1D-203ENST00000399697 FGD5Q6ZNL6 1462 aa33.32■■■□□ 2.92
POLR1D-203ENST00000399697 POLA1P09884 1462 aaPredicted RBP33.3■■■□□ 2.92
POLR1D-203ENST00000399697 TRIM41Q8WV44 630 aa33.24■■■□□ 2.91
POLR1D-203ENST00000399697 CHIC1Q5VXU3 224 aa33.21■■■□□ 2.91
POLR1D-203ENST00000399697 SOGA1O94964 1423 aa33.19■■■□□ 2.9
POLR1D-203ENST00000399697 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
POLR1D-203ENST00000399697 IFT140Q96RY7 1462 aa33.16■■■□□ 2.9
POLR1D-203ENST00000399697 TARBP1Q13395 1621 aaKnown RBP33.12■■■□□ 2.89
POLR1D-203ENST00000399697 ABCA10Q8WWZ4 1543 aa33■■■□□ 2.87
POLR1D-203ENST00000399697 ZNF608Q9ULD9 1512 aaPredicted RBP33■■■□□ 2.87
POLR1D-203ENST00000399697 WDR97A6NE52 1622 aa32.99■■■□□ 2.87
POLR1D-203ENST00000399697 TDRD9Q8NDG6 1382 aaKnown RBP32.95■■■□□ 2.87
POLR1D-203ENST00000399697 AQRO60306 1485 aaKnown RBP eCLIP32.91■■■□□ 2.866e-7■□□□□ 10.5
POLR1D-203ENST00000399697 EIF4G3O43432 1585 aaKnown RBP32.89■■■□□ 2.86
POLR1D-203ENST00000399697 ABCA5Q8WWZ7 1642 aa32.82■■■□□ 2.84
POLR1D-203ENST00000399697 GAPVD1Q14C86 1478 aa32.81■■■□□ 2.84
POLR1D-203ENST00000399697 KIF27Q86VH2 1401 aa32.8■■■□□ 2.84
POLR1D-203ENST00000399697 RUSC2Q8N2Y8 1516 aa32.72■■■□□ 2.83
POLR1D-203ENST00000399697 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
POLR1D-203ENST00000399697 GRIN2BQ13224 1484 aa32.7■■■□□ 2.83
POLR1D-203ENST00000399697 ERICH3Q5RHP9 1530 aa32.62■■■□□ 2.81
POLR1D-203ENST00000399697 SNAPC4Q5SXM2 1469 aa32.6■■■□□ 2.81
POLR1D-203ENST00000399697 FAM9AQ8IZU1 332 aaPredicted RBP32.59■■■□□ 2.81
POLR1D-203ENST00000399697 IGF1RP08069 1367 aa32.58■■■□□ 2.81
POLR1D-203ENST00000399697 EEA1Q15075 1411 aa32.55■■■□□ 2.8
POLR1D-203ENST00000399697 MAGI1Q96QZ7 1491 aaPredicted RBP32.55■■■□□ 2.8
POLR1D-203ENST00000399697 CSRNP3Q8WYN3 585 aa32.47■■■□□ 2.79
POLR1D-203ENST00000399697 ADAMTS12P58397 1594 aa32.46■■■□□ 2.79
POLR1D-203ENST00000399697 FBLN2P98095 1184 aa32.46■■■□□ 2.79
POLR1D-203ENST00000399697 CUL7Q14999 1698 aa32.46■■■□□ 2.79
POLR1D-203ENST00000399697 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
POLR1D-203ENST00000399697 SYNJ2O15056 1496 aa32.42■■■□□ 2.78
POLR1D-203ENST00000399697 CHMP7Q8WUX9 453 aaPredicted RBP32.42■■■□□ 2.78
POLR1D-203ENST00000399697 CARMIL1Q5VZK9 1371 aa32.41■■■□□ 2.78
POLR1D-203ENST00000399697 CHD1O14646 1710 aa32.38■■■□□ 2.77
POLR1D-203ENST00000399697 PRXQ9BXM0 1461 aa32.3■■■□□ 2.76
POLR1D-203ENST00000399697 GRIN2AQ12879 1464 aa32.3■■■□□ 2.76
POLR1D-203ENST00000399697 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
POLR1D-203ENST00000399697 OSCARQ8IYS5 282 aa32.18■■■□□ 2.74
POLR1D-203ENST00000399697 KIF21BO75037 1637 aa32.18■■■□□ 2.74
POLR1D-203ENST00000399697 EHMT2Q96KQ7 1210 aa32.17■■■□□ 2.74
POLR1D-203ENST00000399697 CEP170Q5SW79 1584 aa32.11■■■□□ 2.73
POLR1D-203ENST00000399697 NUP160Q12769 1436 aa32.09■■■□□ 2.73
POLR1D-203ENST00000399697 GOLGA3Q08378 1498 aa32.06■■■□□ 2.72
POLR1D-203ENST00000399697 UBTFP17480 764 aaKnown RBP32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms