Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CDK19-208ENST00000497709 1117 ntTSL 318.04■□□□□ 0.488e-10■■■■□ 22.3
XRN2Q9H0D6 ANKRD12-209ENST00000585234 313 ntTSL 318.01■□□□□ 0.474e-19■■■■□ 22.3
XRN2Q9H0D6 CDK19-207ENST00000468997 1083 ntTSL 1 (best)17.5■□□□□ 0.398e-10■■■■□ 22.3
XRN2Q9H0D6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.338e-10■■■■□ 22.3
XRN2Q9H0D6 CDK19-205ENST00000460913 448 ntTSL 515.97■□□□□ 0.158e-10■■■■□ 22.3
XRN2Q9H0D6 ANKRD12-204ENST00000540578 1338 ntTSL 1 (best)15.19■□□□□ 0.024e-19■■■■□ 22.3
XRN2Q9H0D6 ANKRD12-207ENST00000581635 631 ntTSL 412.93□□□□□ -0.344e-19■■■■□ 22.3
XRN2Q9H0D6 CDK19-204ENST00000457688 955 ntTSL 512.72□□□□□ -0.378e-10■■■■□ 22.3
XRN2Q9H0D6 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.51□□□□□ -1.058e-10■■■■□ 22.3
XRN2Q9H0D6 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.37□□□□□ -1.238e-10■■■■□ 22.3
XRN2Q9H0D6 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.334e-19■■■■□ 22.3
XRN2Q9H0D6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.354e-19■■■■□ 22.3
XRN2Q9H0D6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.711e-6■■■■□ 22.3
XRN2Q9H0D6 CCDC92-207ENST00000545037 559 ntTSL 224.43■■□□□ 1.51e-6■■■■□ 22.3
XRN2Q9H0D6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.07■□□□□ 0.481e-6■■■■□ 22.3
XRN2Q9H0D6 PLK3-204ENST00000465443 2477 ntTSL 517.73■□□□□ 0.434e-6■■■■□ 22.3
XRN2Q9H0D6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.424e-6■■■■□ 22.3
XRN2Q9H0D6 CCDC92-202ENST00000535556 555 ntTSL 46.89□□□□□ -1.311e-6■■■■□ 22.3
XRN2Q9H0D6 UBA52-212ENST00000599256 927 ntTSL 227.92■■■□□ 2.065e-6■■■■□ 22.3
XRN2Q9H0D6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.045e-6■■■■□ 22.3
XRN2Q9H0D6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.65e-6■■■■□ 22.3
XRN2Q9H0D6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.598e-8■■■■□ 22.3
XRN2Q9H0D6 RPL37A-207ENST00000478153 2082 ntTSL 1 (best)23.82■■□□□ 1.45e-6■■■■□ 22.3
XRN2Q9H0D6 SIRT7-202ENST00000536038 1883 ntTSL 223.79■■□□□ 1.48e-8■■■■□ 22.3
XRN2Q9H0D6 AP2A1-208ENST00000601356 2238 nt23.35■■□□□ 1.335e-6■■■■□ 22.3
XRN2Q9H0D6 DNAJB1-208ENST00000598235 882 ntTSL 522.8■■□□□ 1.245e-6■■■■□ 22.3
XRN2Q9H0D6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.78■■□□□ 1.245e-6■■■■□ 22.3
XRN2Q9H0D6 KHSRP-205ENST00000595223 956 ntTSL 521.21■□□□□ 0.995e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-201ENST00000359681 742 ntTSL 1 (best)20.83■□□□□ 0.935e-6■■■■□ 22.3
XRN2Q9H0D6 UBA52-211ENST00000598814 550 ntTSL 1 (best)19.33■□□□□ 0.685e-6■■■■□ 22.3
XRN2Q9H0D6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.31■□□□□ 0.685e-6■■■■□ 22.3
XRN2Q9H0D6 SRRT-204ENST00000448764 1607 ntTSL 518.36■□□□□ 0.535e-6■■■■□ 22.3
XRN2Q9H0D6 PDAP1-202ENST00000426447 767 ntTSL 518.23■□□□□ 0.511e-8■■■■□ 22.3
XRN2Q9H0D6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.445e-6■■■■□ 22.3
XRN2Q9H0D6 AP2A1-204ENST00000594838 611 ntTSL 317.5■□□□□ 0.395e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.03■□□□□ 0.325e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.03■□□□□ 0.325e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.03■□□□□ 0.325e-6■■■■□ 22.3
XRN2Q9H0D6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.231e-8■■■■□ 22.3
XRN2Q9H0D6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.115e-6■■■■□ 22.3
XRN2Q9H0D6 MIR3940-201ENST00000579148 102 ntBASIC15.2■□□□□ 0.025e-6■■■■□ 22.3
XRN2Q9H0D6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.025e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC14.46□□□□□ -0.095e-6■■■■□ 22.3
XRN2Q9H0D6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.131e-20■■■■□ 22.3
XRN2Q9H0D6 RPL6-211ENST00000552455 781 ntTSL 214.05□□□□□ -0.165e-6■■■■□ 22.3
XRN2Q9H0D6 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.25e-6■■■■□ 22.3
XRN2Q9H0D6 ZNF800-202ENST00000393312 2375 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.235e-6■■■■□ 22.3
XRN2Q9H0D6 ZNF800-204ENST00000434602 955 ntTSL 513.44□□□□□ -0.265e-6■■■■□ 22.3
XRN2Q9H0D6 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.315e-6■■■■□ 22.3
XRN2Q9H0D6 SRRT-211ENST00000478693 655 ntTSL 213.08□□□□□ -0.325e-6■■■■□ 22.3
XRN2Q9H0D6 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.97□□□□□ -0.335e-6■■■■□ 22.3
XRN2Q9H0D6 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.351e-20■■■■□ 22.3
XRN2Q9H0D6 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.351e-20■■■■□ 22.3
XRN2Q9H0D6 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC12.72□□□□□ -0.375e-6■■■■□ 22.3
XRN2Q9H0D6 RPL6-209ENST00000551041 1082 ntTSL 212.66□□□□□ -0.385e-6■■■■□ 22.3
XRN2Q9H0D6 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC12.54□□□□□ -0.45e-6■■■■□ 22.3
XRN2Q9H0D6 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.471e-20■■■■□ 22.3
XRN2Q9H0D6 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC11.31□□□□□ -0.65e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-202ENST00000420712 385 ntTSL 510.87□□□□□ -0.675e-6■■■■□ 22.3
XRN2Q9H0D6 ILF3-208ENST00000587928 4230 ntTSL 210.74□□□□□ -0.695e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-209ENST00000490649 1701 ntTSL 1 (best)10.71□□□□□ -0.695e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC10.06□□□□□ -0.85e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-208ENST00000487233 2225 ntTSL 29.84□□□□□ -0.835e-6■■■■□ 22.3
XRN2Q9H0D6 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.855e-6■■■■□ 22.3
XRN2Q9H0D6 RPL6-203ENST00000546368 2008 ntTSL 59.75□□□□□ -0.855e-6■■■■□ 22.3
XRN2Q9H0D6 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.155e-6■■■■□ 22.3
XRN2Q9H0D6 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.185e-6■■■■□ 22.3
XRN2Q9H0D6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.275e-6■■■■□ 22.3
XRN2Q9H0D6 ZNF800-206ENST00000439506 410 ntTSL 1 (best)6.99□□□□□ -1.295e-6■■■■□ 22.3
XRN2Q9H0D6 RPL6-207ENST00000550238 338 ntTSL 56.73□□□□□ -1.335e-6■■■■□ 22.3
XRN2Q9H0D6 ZNF800-205ENST00000436992 502 ntTSL 22.24□□□□□ -2.055e-6■■■■□ 22.3
XRN2Q9H0D6 CLUH-214ENST00000576885 583 ntTSL 316.81■□□□□ 0.287e-7■■■■□ 22.3
XRN2Q9H0D6 CLUH-204ENST00000571566 545 ntTSL 414.78□□□□□ -0.047e-7■■■■□ 22.3
XRN2Q9H0D6 IPO4-220ENST00000561462 1864 ntTSL 217.75■□□□□ 0.432e-6■■■■□ 22.3
XRN2Q9H0D6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.8■■□□□ 1.43e-6■■■■□ 22.2
XRN2Q9H0D6 AL390719.1-204ENST00000412397 1219 ntBASIC23.07■■□□□ 1.283e-6■■■■□ 22.2
XRN2Q9H0D6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.656e-9■■■■□ 22.2
XRN2Q9H0D6 MAZ-206ENST00000562557 475 ntTSL 315.57■□□□□ 0.083e-7■■■■□ 22.2
XRN2Q9H0D6 LONP1-209ENST00000590206 725 ntTSL 315.02■□□□□ -02e-6■■■■□ 22.2
XRN2Q9H0D6 AL390719.1-203ENST00000456409 750 ntTSL 213.88□□□□□ -0.193e-6■■■■□ 22.2
XRN2Q9H0D6 AL390719.1-202ENST00000394517 397 ntTSL 511.78□□□□□ -0.523e-6■■■■□ 22.2
XRN2Q9H0D6 UBE2N-203ENST00000549490 676 ntTSL 211.33□□□□□ -0.66e-9■■■■□ 22.2
XRN2Q9H0D6 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC10.7□□□□□ -0.76e-9■■■■□ 22.2
XRN2Q9H0D6 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC9.12□□□□□ -0.956e-9■■■■□ 22.2
XRN2Q9H0D6 ANKRD11-209ENST00000564553 471 ntTSL 315.92■□□□□ 0.147e-7■■■■□ 22.2
XRN2Q9H0D6 CDKN1A-206ENST00000462537 553 ntTSL 321.79■■□□□ 1.085e-7■■■■□ 22.2
XRN2Q9H0D6 CDKN1A-205ENST00000459970 604 ntTSL 521.63■■□□□ 1.055e-7■■■■□ 22.2
XRN2Q9H0D6 CDKN1A-207ENST00000478800 616 ntTSL 219.98■□□□□ 0.795e-7■■■■□ 22.2
XRN2Q9H0D6 MKNK2-210ENST00000589534 454 ntTSL 231.53■■■□□ 2.644e-7■■■■□ 22.2
XRN2Q9H0D6 MKNK2-209ENST00000589509 352 ntTSL 513.43□□□□□ -0.264e-7■■■■□ 22.2
XRN2Q9H0D6 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.815e-11■■■■□ 22.2
XRN2Q9H0D6 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.835e-11■■■■□ 22.2
XRN2Q9H0D6 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.15e-11■■■■□ 22.2
XRN2Q9H0D6 PDCD4-205ENST00000467574 735 ntTSL 330.24■■■□□ 2.434e-6■■■■□ 22.2
XRN2Q9H0D6 PDCD4-208ENST00000483670 774 ntTSL 530.12■■■□□ 2.414e-6■■■■□ 22.2
XRN2Q9H0D6 CYHR1-207ENST00000528558 907 ntTSL 226.95■■□□□ 1.91e-6■■■■□ 22.2
XRN2Q9H0D6 PDCD4-203ENST00000444997 819 ntTSL 320.76■□□□□ 0.914e-6■■■■□ 22.2
XRN2Q9H0D6 CYHR1-208ENST00000528663 5821 ntTSL 1 (best)15.34■□□□□ 0.053e-13■■■■□ 22.2
XRN2Q9H0D6 CYHR1-211ENST00000533173 6158 ntTSL 1 (best)14.21□□□□□ -0.131e-6■■■■□ 22.2
XRN2Q9H0D6 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC11.13□□□□□ -0.634e-6■■■■□ 22.2
Retrieved 100 of 21,068 protein–RNA pairs in 167.2 ms