Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC079395.2-201ENST00000610982 737 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 OR2AT2P-201ENST00000413438 905 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 RPL35AP3-201ENST00000414680 288 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AC009784.1-201ENST00000426484 460 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AC139272.1-201ENST00000505516 640 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AC131392.1-201ENST00000506490 633 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AC104695.2-201ENST00000605056 775 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AC006924.1-201ENST00000610750 559 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 RN7SL610P-201ENST00000463845 291 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 OR10G5P-201ENST00000532733 358 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AC010547.6-201ENST00000571789 193 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.71□□□□□ -1.33
CHD7Q9P2D1 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 RPS3AP2-201ENST00000407190 754 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 IGLV2-28-201ENST00000520681 304 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AL157899.1-201ENST00000604110 936 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 FABP7P2-201ENST00000429946 379 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AL034399.1-201ENST00000451535 380 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AC044860.2-201ENST00000561005 179 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AP000864.1-201ENST00000609424 650 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AC131009.3-201ENST00000621809 287 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 AC119674.1-217ENST00000641942 1086 ntBASIC6.71□□□□□ -1.34
CHD7Q9P2D1 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CHD7Q9P2D1 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms