RNA–Protein interactions for RNA: ENST00000395290.6

CELF1-204, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CELF1, Length 7,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-204ENST00000395290 PELP1Q8IZL8 1130 aaKnown RBP19.83■□□□□ 0.76
CELF1-204ENST00000395290 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
CELF1-204ENST00000395290 ERICH6Q7L0X2 663 aa19.1■□□□□ 0.65
CELF1-204ENST00000395290 MYT1Q01538 1121 aa19■□□□□ 0.63
CELF1-204ENST00000395290 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
CELF1-204ENST00000395290 CENPBP07199 599 aaPredicted RBP18.52■□□□□ 0.56
CELF1-204ENST00000395290 SUPT5HO00267 1087 aaKnown RBP18.41■□□□□ 0.54
CELF1-204ENST00000395290 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
CELF1-204ENST00000395290 APLP2Q06481 763 aa18.27■□□□□ 0.52
CELF1-204ENST00000395290 NEFLP07196 543 aa18.19■□□□□ 0.5
CELF1-204ENST00000395290 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
CELF1-204ENST00000395290 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
CELF1-204ENST00000395290 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
CELF1-204ENST00000395290 DAXXQ9UER7 740 aaPredicted RBP18■□□□□ 0.47
CELF1-204ENST00000395290 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
CELF1-204ENST00000395290 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
CELF1-204ENST00000395290 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
CELF1-204ENST00000395290 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
CELF1-204ENST00000395290 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
CELF1-204ENST00000395290 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
CELF1-204ENST00000395290 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
CELF1-204ENST00000395290 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
CELF1-204ENST00000395290 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
CELF1-204ENST00000395290 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.32
CELF1-204ENST00000395290 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
CELF1-204ENST00000395290 HRCP23327 699 aa17.03■□□□□ 0.32
CELF1-204ENST00000395290 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
CELF1-204ENST00000395290 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
CELF1-204ENST00000395290 EIF5BO60841 1220 aaKnown RBP17■□□□□ 0.31
CELF1-204ENST00000395290 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
CELF1-204ENST00000395290 CNGB1Q14028 1251 aaPredicted RBP16.93■□□□□ 0.3
CELF1-204ENST00000395290 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
CELF1-204ENST00000395290 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
CELF1-204ENST00000395290 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
CELF1-204ENST00000395290 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
CELF1-204ENST00000395290 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
CELF1-204ENST00000395290 DIEXFQ68CQ4 756 aaKnown RBP16.77■□□□□ 0.27
CELF1-204ENST00000395290 BCANQ96GW7 911 aa16.76■□□□□ 0.27
CELF1-204ENST00000395290 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
CELF1-204ENST00000395290 ITGAEP38570 1179 aa16.72■□□□□ 0.27
CELF1-204ENST00000395290 ANP32AP39687 249 aaKnown RBP16.71■□□□□ 0.27
CELF1-204ENST00000395290 GTF3C3Q9Y5Q9 886 aa16.7■□□□□ 0.26
CELF1-204ENST00000395290 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
CELF1-204ENST00000395290 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
CELF1-204ENST00000395290 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
CELF1-204ENST00000395290 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
CELF1-204ENST00000395290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
CELF1-204ENST00000395290 NPM2Q86SE8 214 aaKnown RBP16.51■□□□□ 0.23
CELF1-204ENST00000395290 ANP32CO43423 234 aa16.47■□□□□ 0.23
CELF1-204ENST00000395290 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
CELF1-204ENST00000395290 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
CELF1-204ENST00000395290 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
CELF1-204ENST00000395290 UPF2Q9HAU5 1272 aaKnown RBP16.33■□□□□ 0.2
CELF1-204ENST00000395290 NBR1Q14596 966 aa16.31■□□□□ 0.2
CELF1-204ENST00000395290 NEFMP07197 916 aa16.28■□□□□ 0.2
CELF1-204ENST00000395290 ACIN1Q9UKV3 1341 aaKnown RBP16.27■□□□□ 0.2
CELF1-204ENST00000395290 ARXQ96QS3 562 aa16.27■□□□□ 0.19
CELF1-204ENST00000395290 CDK11BP21127 795 aaKnown RBP16.26■□□□□ 0.19
CELF1-204ENST00000395290 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
CELF1-204ENST00000395290 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
CELF1-204ENST00000395290 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
CELF1-204ENST00000395290 TRIM44Q96DX7 344 aaPredicted RBP16.16■□□□□ 0.18
CELF1-204ENST00000395290 FKBP8Q14318 412 aa16.13■□□□□ 0.17
CELF1-204ENST00000395290 ZNF326Q5BKZ1 582 aaKnown RBP16.12■□□□□ 0.17
CELF1-204ENST00000395290 LOC105371045A0A1W2PR82 267 aa16.12■□□□□ 0.17
CELF1-204ENST00000395290 ANP32EQ9BTT0 268 aa16.01■□□□□ 0.15
CELF1-204ENST00000395290 DNTTIP2Q5QJE6 756 aaKnown RBP15.99■□□□□ 0.15
CELF1-204ENST00000395290 NAP1L5Q96NT1 182 aaPredicted RBP15.98■□□□□ 0.15
CELF1-204ENST00000395290 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
CELF1-204ENST00000395290 PTMAP06454 111 aaKnown RBP15.94■□□□□ 0.14
CELF1-204ENST00000395290 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
CELF1-204ENST00000395290 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
CELF1-204ENST00000395290 DDRGK1Q96HY6 314 aa15.94■□□□□ 0.14
CELF1-204ENST00000395290 ERICH6BQ5W0A0 696 aa15.93■□□□□ 0.14
CELF1-204ENST00000395290 AMER1Q5JTC6 1135 aaPredicted RBP15.92■□□□□ 0.14
CELF1-204ENST00000395290 BECN1Q14457 450 aa15.91■□□□□ 0.14
CELF1-204ENST00000395290 GOLGA6L22H0YM25 854 aa15.9■□□□□ 0.14
CELF1-204ENST00000395290 HNRNPUQ00839 825 aaKnown RBP eCLIP15.86■□□□□ 0.135e-8■□□□□ 8.2
CELF1-204ENST00000395290 ZRSR1Q15695 479 aaKnown RBP15.84■□□□□ 0.13
CELF1-204ENST00000395290 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
CELF1-204ENST00000395290 MYH16Q9H6N6 1097 aa15.78■□□□□ 0.12
CELF1-204ENST00000395290 FAM9BQ8IZU0 186 aa15.78■□□□□ 0.12
CELF1-204ENST00000395290 GOLGA6L6A8MZA4 724 aa15.75■□□□□ 0.11
CELF1-204ENST00000395290 SALL2Q9Y467 1007 aaPredicted RBP15.73■□□□□ 0.11
CELF1-204ENST00000395290 CHAF1AQ13111 956 aaPredicted RBP15.71■□□□□ 0.1
CELF1-204ENST00000395290 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
CELF1-204ENST00000395290 TMC1Q8TDI8 760 aa15.65■□□□□ 0.1
CELF1-204ENST00000395290 TPRNQ4KMQ1 711 aa15.64■□□□□ 0.09
CELF1-204ENST00000395290 WDR43Q15061 677 aaKnown RBP eCLIP15.64■□□□□ 0.09
CELF1-204ENST00000395290 TNNT3P45378 269 aaPredicted RBP15.64■□□□□ 0.09
CELF1-204ENST00000395290 NRDCO43847 1150 aa15.64■□□□□ 0.09
CELF1-204ENST00000395290 TULP1O00294 542 aaPredicted RBP15.64■□□□□ 0.09
CELF1-204ENST00000395290 PLCB2Q00722 1185 aa15.63■□□□□ 0.09
CELF1-204ENST00000395290 CASC1Q6TDU7 716 aa15.62■□□□□ 0.09
CELF1-204ENST00000395290 MSNP26038 577 aaKnown RBP15.62■□□□□ 0.09
CELF1-204ENST00000395290 IRX6P78412 446 aaPredicted RBP15.61■□□□□ 0.09
CELF1-204ENST00000395290 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
CELF1-204ENST00000395290 TONSLQ96HA7 1378 aa15.58■□□□□ 0.08
CELF1-204ENST00000395290 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
CELF1-204ENST00000395290 L1TD1Q5T7N2 865 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms