RNA–Protein interactions for RNA: ENST00000560744.1

AP001007.3-201, humanhuman

TSL 5 BASIC

Gene AP001007.3, Length 356 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-201ENST00000560744 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
AP001007.3-201ENST00000560744 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
AP001007.3-201ENST00000560744 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
AP001007.3-201ENST00000560744 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
AP001007.3-201ENST00000560744 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
AP001007.3-201ENST00000560744 CCDC180Q9P1Z9 1646 aa12.96□□□□□ -0.33
AP001007.3-201ENST00000560744 ABCC9O60706 1549 aa12.88□□□□□ -0.35
AP001007.3-201ENST00000560744 FOXD1Q16676 465 aa12.53□□□□□ -0.4
AP001007.3-201ENST00000560744 PLPPR3Q6T4P5 718 aa12.51□□□□□ -0.41
AP001007.3-201ENST00000560744 DCAF8L2P0C7V8 631 aa12.29□□□□□ -0.44
AP001007.3-201ENST00000560744 RB1CC1Q8TDY2 1594 aa12.29□□□□□ -0.44
AP001007.3-201ENST00000560744 NACADO15069 1562 aa12.25□□□□□ -0.45
AP001007.3-201ENST00000560744 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
AP001007.3-201ENST00000560744 ZCCHC6Q5VYS8 1495 aaKnown RBP12.09□□□□□ -0.47
AP001007.3-201ENST00000560744 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
AP001007.3-201ENST00000560744 DCAF1Q9Y4B6 1507 aa12.02□□□□□ -0.48
AP001007.3-201ENST00000560744 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
AP001007.3-201ENST00000560744 DNAJC5BQ9UF47 199 aa12□□□□□ -0.49
AP001007.3-201ENST00000560744 BICRAQ9NZM4 1560 aa11.94□□□□□ -0.5
AP001007.3-201ENST00000560744 ADRA2BP18089 450 aa11.92□□□□□ -0.5
AP001007.3-201ENST00000560744 PPP6R1Q9UPN7 881 aa11.89□□□□□ -0.51
AP001007.3-201ENST00000560744 SCRIBQ14160 1630 aa11.86□□□□□ -0.51
AP001007.3-201ENST00000560744 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
AP001007.3-201ENST00000560744 MSH5O43196 834 aa11.76□□□□□ -0.53
AP001007.3-201ENST00000560744 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
AP001007.3-201ENST00000560744 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
AP001007.3-201ENST00000560744 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
AP001007.3-201ENST00000560744 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
AP001007.3-201ENST00000560744 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
AP001007.3-201ENST00000560744 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
AP001007.3-201ENST00000560744 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
AP001007.3-201ENST00000560744 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
AP001007.3-201ENST00000560744 SMARCA2P51531 1590 aa11.27□□□□□ -0.61
AP001007.3-201ENST00000560744 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
AP001007.3-201ENST00000560744 HMGXB3Q12766 1538 aa11.23□□□□□ -0.61
AP001007.3-201ENST00000560744 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
AP001007.3-201ENST00000560744 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
AP001007.3-201ENST00000560744 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
AP001007.3-201ENST00000560744 NESP48681 1621 aa11.11□□□□□ -0.63
AP001007.3-201ENST00000560744 WIZO95785 1651 aa11.09□□□□□ -0.63
AP001007.3-201ENST00000560744 ERCC6Q03468 1493 aa11.09□□□□□ -0.63
AP001007.3-201ENST00000560744 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
AP001007.3-201ENST00000560744 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.65
AP001007.3-201ENST00000560744 CUX2O14529 1486 aa11.01□□□□□ -0.65
AP001007.3-201ENST00000560744 CADPSQ9ULU8 1353 aa11□□□□□ -0.65
AP001007.3-201ENST00000560744 PDS5BQ9NTI5 1447 aa10.97□□□□□ -0.65
AP001007.3-201ENST00000560744 TOP2AP11388 1531 aaKnown RBP10.96□□□□□ -0.65
AP001007.3-201ENST00000560744 PPP4R3CPQ6ZMV5 832 aa10.94□□□□□ -0.66
AP001007.3-201ENST00000560744 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
AP001007.3-201ENST00000560744 THOC2Q8NI27 1593 aaKnown RBP10.93□□□□□ -0.66
AP001007.3-201ENST00000560744 CFTRP13569 1480 aa10.89□□□□□ -0.67
AP001007.3-201ENST00000560744 DNAJC5Q9H3Z4 198 aa10.88□□□□□ -0.67
AP001007.3-201ENST00000560744 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
AP001007.3-201ENST00000560744 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
AP001007.3-201ENST00000560744 CCDC88BA6NC98 1476 aa10.86□□□□□ -0.67
AP001007.3-201ENST00000560744 POTEDQ86YR6 584 aa10.85□□□□□ -0.67
AP001007.3-201ENST00000560744 CEP164Q9UPV0 1460 aa10.85□□□□□ -0.67
AP001007.3-201ENST00000560744 MAPK8IP2Q13387 824 aaPredicted RBP10.83□□□□□ -0.68
AP001007.3-201ENST00000560744 WDR62O43379 1518 aa10.82□□□□□ -0.68
AP001007.3-201ENST00000560744 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
AP001007.3-201ENST00000560744 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
AP001007.3-201ENST00000560744 NCBP3Q53F19 620 aaKnown RBP10.75□□□□□ -0.69
AP001007.3-201ENST00000560744 PRDM2Q13029 1718 aa10.74□□□□□ -0.69
AP001007.3-201ENST00000560744 CNKSR2Q8WXI2 1034 aa10.73□□□□□ -0.69
AP001007.3-201ENST00000560744 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
AP001007.3-201ENST00000560744 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
AP001007.3-201ENST00000560744 ABCC8Q09428 1581 aa10.65□□□□□ -0.71
AP001007.3-201ENST00000560744 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
AP001007.3-201ENST00000560744 DNMBPQ6XZF7 1577 aa10.63□□□□□ -0.71
AP001007.3-201ENST00000560744 ZNF608Q9ULD9 1512 aaPredicted RBP10.62□□□□□ -0.71
AP001007.3-201ENST00000560744 POLA1P09884 1462 aaPredicted RBP10.57□□□□□ -0.72
AP001007.3-201ENST00000560744 OSCARQ8IYS5 282 aa10.57□□□□□ -0.72
AP001007.3-201ENST00000560744 TARBP1Q13395 1621 aaKnown RBP10.55□□□□□ -0.72
AP001007.3-201ENST00000560744 CUX1P39880 1505 aa10.55□□□□□ -0.72
AP001007.3-201ENST00000560744 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.72
AP001007.3-201ENST00000560744 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
AP001007.3-201ENST00000560744 SOGA1O94964 1423 aa10.54□□□□□ -0.72
AP001007.3-201ENST00000560744 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
AP001007.3-201ENST00000560744 EIF4G3O43432 1585 aaKnown RBP10.53□□□□□ -0.72
AP001007.3-201ENST00000560744 FGD5Q6ZNL6 1462 aa10.53□□□□□ -0.72
AP001007.3-201ENST00000560744 TDRD9Q8NDG6 1382 aaKnown RBP10.52□□□□□ -0.73
AP001007.3-201ENST00000560744 HOXD11P31277 338 aaPredicted RBP10.5□□□□□ -0.73
AP001007.3-201ENST00000560744 TRIM41Q8WV44 630 aa10.48□□□□□ -0.73
AP001007.3-201ENST00000560744 KCNA4P22459 653 aa10.46□□□□□ -0.73
AP001007.3-201ENST00000560744 FBLN2P98095 1184 aa10.46□□□□□ -0.73
AP001007.3-201ENST00000560744 NPM3O75607 178 aaKnown RBP10.43□□□□□ -0.74
AP001007.3-201ENST00000560744 SNAPC4Q5SXM2 1469 aa10.42□□□□□ -0.74
AP001007.3-201ENST00000560744 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.74
AP001007.3-201ENST00000560744 CHD1O14646 1710 aa10.42□□□□□ -0.74
AP001007.3-201ENST00000560744 WDR97A6NE52 1622 aa10.42□□□□□ -0.74
AP001007.3-201ENST00000560744 GRIN2BQ13224 1484 aa10.42□□□□□ -0.74
AP001007.3-201ENST00000560744 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
AP001007.3-201ENST00000560744 GAPVD1Q14C86 1478 aa10.41□□□□□ -0.74
AP001007.3-201ENST00000560744 SYNJ1O43426 1573 aa10.4□□□□□ -0.74
AP001007.3-201ENST00000560744 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
AP001007.3-201ENST00000560744 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
AP001007.3-201ENST00000560744 MAGI1Q96QZ7 1491 aaPredicted RBP10.39□□□□□ -0.75
AP001007.3-201ENST00000560744 DCAF8L1A6NGE4 600 aa10.39□□□□□ -0.75
AP001007.3-201ENST00000560744 BIVM-ERCC5R4GMW8 1640 aa10.39□□□□□ -0.75
AP001007.3-201ENST00000560744 RIMBP3CA6NJZ7 1639 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms