RNA–Protein interactions for RNA: ENST00000367911.3

CCDC190-202, Transcript of coiled-coil domain containing 190, humanhuman

APPRIS P2 TSL 3 BASIC

Gene CCDC190, Length 1,395 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190-202ENST00000367911 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
CCDC190-202ENST00000367911 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
CCDC190-202ENST00000367911 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
CCDC190-202ENST00000367911 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
CCDC190-202ENST00000367911 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
CCDC190-202ENST00000367911 FOXD1Q16676 465 aa19.23■□□□□ 0.67
CCDC190-202ENST00000367911 MSH5O43196 834 aa18.17■□□□□ 0.5
CCDC190-202ENST00000367911 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.43
CCDC190-202ENST00000367911 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
CCDC190-202ENST00000367911 ADRA2BP18089 450 aa17.54■□□□□ 0.4
CCDC190-202ENST00000367911 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
CCDC190-202ENST00000367911 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
CCDC190-202ENST00000367911 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
CCDC190-202ENST00000367911 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
CCDC190-202ENST00000367911 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
CCDC190-202ENST00000367911 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
CCDC190-202ENST00000367911 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
CCDC190-202ENST00000367911 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.04
CCDC190-202ENST00000367911 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
CCDC190-202ENST00000367911 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
CCDC190-202ENST00000367911 POTEHQ6S545 545 aa15.13■□□□□ 0.01
CCDC190-202ENST00000367911 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
CCDC190-202ENST00000367911 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
CCDC190-202ENST00000367911 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
CCDC190-202ENST00000367911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCDC190-202ENST00000367911 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
CCDC190-202ENST00000367911 NISCHQ9Y2I1 1504 aa14.35□□□□□ -0.11
CCDC190-202ENST00000367911 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
CCDC190-202ENST00000367911 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
CCDC190-202ENST00000367911 DSG3P32926 999 aa14.29□□□□□ -0.12
CCDC190-202ENST00000367911 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
CCDC190-202ENST00000367911 CAPN15O75808 1086 aa14.22□□□□□ -0.13
CCDC190-202ENST00000367911 ABCB7O75027 752 aa13.92□□□□□ -0.18
CCDC190-202ENST00000367911 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
CCDC190-202ENST00000367911 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
CCDC190-202ENST00000367911 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
CCDC190-202ENST00000367911 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
CCDC190-202ENST00000367911 KCNA4P22459 653 aa13.62□□□□□ -0.23
CCDC190-202ENST00000367911 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
CCDC190-202ENST00000367911 APLP2Q06481 763 aa13.57□□□□□ -0.24
CCDC190-202ENST00000367911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
CCDC190-202ENST00000367911 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
CCDC190-202ENST00000367911 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
CCDC190-202ENST00000367911 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
CCDC190-202ENST00000367911 POLA2Q14181 598 aa13.4□□□□□ -0.26
CCDC190-202ENST00000367911 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
CCDC190-202ENST00000367911 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
CCDC190-202ENST00000367911 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
CCDC190-202ENST00000367911 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
CCDC190-202ENST00000367911 HAX1O00165 279 aa13.08□□□□□ -0.31
CCDC190-202ENST00000367911 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.31
CCDC190-202ENST00000367911 EVX2Q03828 476 aa12.98□□□□□ -0.33
CCDC190-202ENST00000367911 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
CCDC190-202ENST00000367911 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
CCDC190-202ENST00000367911 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC190-202ENST00000367911 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
CCDC190-202ENST00000367911 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
CCDC190-202ENST00000367911 CCDC180Q9P1Z9 1646 aa12.86□□□□□ -0.35
CCDC190-202ENST00000367911 ABCC9O60706 1549 aa12.84□□□□□ -0.35
CCDC190-202ENST00000367911 LHX8Q68G74 356 aa12.82□□□□□ -0.36
CCDC190-202ENST00000367911 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
CCDC190-202ENST00000367911 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
CCDC190-202ENST00000367911 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
CCDC190-202ENST00000367911 ZBTB22O15209 634 aa12.57□□□□□ -0.4
CCDC190-202ENST00000367911 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
CCDC190-202ENST00000367911 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
CCDC190-202ENST00000367911 GABBR2O75899 941 aa12.54□□□□□ -0.4
CCDC190-202ENST00000367911 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
CCDC190-202ENST00000367911 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
CCDC190-202ENST00000367911 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
CCDC190-202ENST00000367911 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
CCDC190-202ENST00000367911 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
CCDC190-202ENST00000367911 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
CCDC190-202ENST00000367911 FBLN2P98095 1184 aa12.39□□□□□ -0.43
CCDC190-202ENST00000367911 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
CCDC190-202ENST00000367911 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
CCDC190-202ENST00000367911 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
CCDC190-202ENST00000367911 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
CCDC190-202ENST00000367911 RB1CC1Q8TDY2 1594 aa12.27□□□□□ -0.45
CCDC190-202ENST00000367911 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
CCDC190-202ENST00000367911 NACADO15069 1562 aa12.19□□□□□ -0.46
CCDC190-202ENST00000367911 PABPN1Q86U42 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC190-202ENST00000367911 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
CCDC190-202ENST00000367911 CD44P16070 742 aaKnown RBP12.15□□□□□ -0.46
CCDC190-202ENST00000367911 POTEMA6NI47 508 aa12.13□□□□□ -0.47
CCDC190-202ENST00000367911 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
CCDC190-202ENST00000367911 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
CCDC190-202ENST00000367911 MYO15BQ96JP2 1530 aa12.03□□□□□ -0.48
CCDC190-202ENST00000367911 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
CCDC190-202ENST00000367911 DCBLD2Q96PD2 775 aa11.99□□□□□ -0.49
CCDC190-202ENST00000367911 PCDH10Q9P2E7 1040 aa11.96□□□□□ -0.49
CCDC190-202ENST00000367911 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
CCDC190-202ENST00000367911 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
CCDC190-202ENST00000367911 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
CCDC190-202ENST00000367911 CLCN6P51797 869 aa11.91□□□□□ -0.5
CCDC190-202ENST00000367911 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
CCDC190-202ENST00000367911 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
CCDC190-202ENST00000367911 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
CCDC190-202ENST00000367911 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
CCDC190-202ENST00000367911 CREBZFQ9NS37 354 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms