RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 NISCHQ9Y2I1 1504 aa13.41□□□□□ -0.26
LINC00309-201ENST00000431020 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
LINC00309-201ENST00000431020 CHIC1Q5VXU3 224 aa11.93□□□□□ -0.5
LINC00309-201ENST00000431020 ABCC9O60706 1549 aa11.9□□□□□ -0.5
LINC00309-201ENST00000431020 CCDC180Q9P1Z9 1646 aa11.54□□□□□ -0.56
LINC00309-201ENST00000431020 AEBP2Q6ZN18 517 aaPredicted RBP11.42□□□□□ -0.58
LINC00309-201ENST00000431020 SHROOM4Q9ULL8 1493 aa11.42□□□□□ -0.58
LINC00309-201ENST00000431020 PABPN1Q86U42 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC00309-201ENST00000431020 ZCCHC6Q5VYS8 1495 aaKnown RBP11.11□□□□□ -0.63
LINC00309-201ENST00000431020 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
LINC00309-201ENST00000431020 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
LINC00309-201ENST00000431020 NACADO15069 1562 aa10.99□□□□□ -0.65
LINC00309-201ENST00000431020 DNAJC5BQ9UF47 199 aa10.89□□□□□ -0.67
LINC00309-201ENST00000431020 SUPT5HO00267 1087 aaKnown RBP10.88□□□□□ -0.67
LINC00309-201ENST00000431020 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.69
LINC00309-201ENST00000431020 UNC13AQ9UPW8 1703 aa10.74□□□□□ -0.69
LINC00309-201ENST00000431020 MYO15BQ96JP2 1530 aa10.7□□□□□ -0.7
LINC00309-201ENST00000431020 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
LINC00309-201ENST00000431020 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
LINC00309-201ENST00000431020 PHF23Q9BUL5 403 aaPredicted RBP10.62□□□□□ -0.71
LINC00309-201ENST00000431020 EIF4G1Q04637 1599 aaKnown RBP10.51□□□□□ -0.73
LINC00309-201ENST00000431020 CC2D2AQ9P2K1 1620 aa10.48□□□□□ -0.73
LINC00309-201ENST00000431020 POTEDQ86YR6 584 aa10.48□□□□□ -0.73
LINC00309-201ENST00000431020 MROH2BQ7Z745 1585 aa10.47□□□□□ -0.73
LINC00309-201ENST00000431020 RSF1Q96T23 1441 aaPredicted RBP10.4□□□□□ -0.75
LINC00309-201ENST00000431020 BAZ1BQ9UIG0 1483 aaKnown RBP10.36□□□□□ -0.75
LINC00309-201ENST00000431020 WIZO95785 1651 aa10.36□□□□□ -0.75
LINC00309-201ENST00000431020 BAZ1AQ9NRL2 1556 aaPredicted RBP10.36□□□□□ -0.75
LINC00309-201ENST00000431020 ATAD2BQ9ULI0 1458 aa10.35□□□□□ -0.75
LINC00309-201ENST00000431020 SMARCA4P51532 1647 aa10.34□□□□□ -0.75
LINC00309-201ENST00000431020 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
LINC00309-201ENST00000431020 NESP48681 1621 aa10.27□□□□□ -0.76
LINC00309-201ENST00000431020 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
LINC00309-201ENST00000431020 ERCC6Q03468 1493 aa10.24□□□□□ -0.77
LINC00309-201ENST00000431020 NCAPD3P42695 1498 aa10.22□□□□□ -0.77
LINC00309-201ENST00000431020 FAM9AQ8IZU1 332 aaPredicted RBP10.17□□□□□ -0.78
LINC00309-201ENST00000431020 CCDC88BA6NC98 1476 aa10.15□□□□□ -0.78
LINC00309-201ENST00000431020 FBLN2P98095 1184 aa10.11□□□□□ -0.79
LINC00309-201ENST00000431020 CADPSQ9ULU8 1353 aa10.11□□□□□ -0.79
LINC00309-201ENST00000431020 TOP2AP11388 1531 aaKnown RBP10.08□□□□□ -0.8
LINC00309-201ENST00000431020 RANGAP1P46060 587 aaPredicted RBP10.07□□□□□ -0.8
LINC00309-201ENST00000431020 HMGXB3Q12766 1538 aa10.06□□□□□ -0.8
LINC00309-201ENST00000431020 TRIM41Q8WV44 630 aa10.06□□□□□ -0.8
LINC00309-201ENST00000431020 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
LINC00309-201ENST00000431020 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
LINC00309-201ENST00000431020 FANCD2Q9BXW9 1451 aa10.01□□□□□ -0.81
LINC00309-201ENST00000431020 PEG3Q9GZU2 1588 aa10□□□□□ -0.81
LINC00309-201ENST00000431020 CEP164Q9UPV0 1460 aa9.96□□□□□ -0.81
LINC00309-201ENST00000431020 ABCC8Q09428 1581 aa9.96□□□□□ -0.81
LINC00309-201ENST00000431020 CFTRP13569 1480 aa9.94□□□□□ -0.82
LINC00309-201ENST00000431020 TDRD9Q8NDG6 1382 aaKnown RBP9.94□□□□□ -0.82
LINC00309-201ENST00000431020 PLPPR3Q6T4P5 718 aa9.92□□□□□ -0.82
LINC00309-201ENST00000431020 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.82
LINC00309-201ENST00000431020 LAMC3Q9Y6N6 1575 aa9.89□□□□□ -0.83
LINC00309-201ENST00000431020 RAD54L2Q9Y4B4 1467 aa9.88□□□□□ -0.83
LINC00309-201ENST00000431020 WRNQ14191 1432 aaPredicted RBP eCLIP9.86□□□□□ -0.83
LINC00309-201ENST00000431020 SLC24A1O60721 1099 aa9.85□□□□□ -0.83
LINC00309-201ENST00000431020 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.83
LINC00309-201ENST00000431020 URB2Q14146 1524 aaKnown RBP9.85□□□□□ -0.83
LINC00309-201ENST00000431020 CHMP7Q8WUX9 453 aaPredicted RBP9.84□□□□□ -0.83
LINC00309-201ENST00000431020 MRC2Q9UBG0 1479 aa9.84□□□□□ -0.83
LINC00309-201ENST00000431020 SOGA1O94964 1423 aa9.84□□□□□ -0.83
LINC00309-201ENST00000431020 ZNF608Q9ULD9 1512 aaPredicted RBP9.81□□□□□ -0.84
LINC00309-201ENST00000431020 TOPBP1Q92547 1522 aa9.8□□□□□ -0.84
LINC00309-201ENST00000431020 UBTFP17480 764 aaKnown RBP9.8□□□□□ -0.84
LINC00309-201ENST00000431020 FGD5Q6ZNL6 1462 aa9.79□□□□□ -0.84
LINC00309-201ENST00000431020 LOC105371045A0A1W2PR82 267 aa9.78□□□□□ -0.84
LINC00309-201ENST00000431020 ARID3CA6NKF2 412 aa9.78□□□□□ -0.84
LINC00309-201ENST00000431020 P3H3Q8IVL6 736 aa9.77□□□□□ -0.84
LINC00309-201ENST00000431020 CUX2O14529 1486 aa9.77□□□□□ -0.85
LINC00309-201ENST00000431020 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
LINC00309-201ENST00000431020 CUX1P39880 1505 aa9.77□□□□□ -0.85
LINC00309-201ENST00000431020 POLA1P09884 1462 aaPredicted RBP9.76□□□□□ -0.85
LINC00309-201ENST00000431020 RUSC2Q8N2Y8 1516 aa9.73□□□□□ -0.85
LINC00309-201ENST00000431020 SYNJ1O43426 1573 aa9.73□□□□□ -0.85
LINC00309-201ENST00000431020 OSCARQ8IYS5 282 aa9.72□□□□□ -0.85
LINC00309-201ENST00000431020 CYB5RLQ6IPT4 315 aa9.71□□□□□ -0.85
LINC00309-201ENST00000431020 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.86
LINC00309-201ENST00000431020 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
LINC00309-201ENST00000431020 CSRNP3Q8WYN3 585 aa9.68□□□□□ -0.86
LINC00309-201ENST00000431020 WDR62O43379 1518 aa9.67□□□□□ -0.86
LINC00309-201ENST00000431020 GAPVD1Q14C86 1478 aa9.66□□□□□ -0.86
LINC00309-201ENST00000431020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.65□□□□□ -0.86
LINC00309-201ENST00000431020 HNRNPUL2Q1KMD3 747 aaKnown RBP9.65□□□□□ -0.86
LINC00309-201ENST00000431020 IFT140Q96RY7 1462 aa9.65□□□□□ -0.86
LINC00309-201ENST00000431020 KIF27Q86VH2 1401 aa9.63□□□□□ -0.87
LINC00309-201ENST00000431020 SNAPC4Q5SXM2 1469 aa9.63□□□□□ -0.87
LINC00309-201ENST00000431020 PPARGC1BQ86YN6 1023 aaKnown RBP9.61□□□□□ -0.87
LINC00309-201ENST00000431020 CARMIL1Q5VZK9 1371 aa9.6□□□□□ -0.87
LINC00309-201ENST00000431020 TRHP20396 242 aaPredicted RBP9.6□□□□□ -0.87
LINC00309-201ENST00000431020 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
LINC00309-201ENST00000431020 IGF1RP08069 1367 aa9.59□□□□□ -0.87
LINC00309-201ENST00000431020 TOP2BQ02880 1626 aa9.59□□□□□ -0.87
LINC00309-201ENST00000431020 EIF4G3O43432 1585 aaKnown RBP9.57□□□□□ -0.88
LINC00309-201ENST00000431020 PRDM2Q13029 1718 aa9.57□□□□□ -0.88
LINC00309-201ENST00000431020 JPH4Q96JJ6 628 aa9.57□□□□□ -0.88
LINC00309-201ENST00000431020 GRIN2BQ13224 1484 aa9.56□□□□□ -0.88
LINC00309-201ENST00000431020 ABCA10Q8WWZ4 1543 aa9.53□□□□□ -0.88
LINC00309-201ENST00000431020 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
LINC00309-201ENST00000431020 KCNH8Q96L42 1107 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms