RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-222ENST00000636048 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
ARHGEF9-222ENST00000636048 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
ARHGEF9-222ENST00000636048 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
ARHGEF9-222ENST00000636048 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.05
ARHGEF9-222ENST00000636048 PCGF6Q9BYE7 350 aa14.68□□□□□ -0.06
ARHGEF9-222ENST00000636048 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
ARHGEF9-222ENST00000636048 HRCP23327 699 aa14.46□□□□□ -0.09
ARHGEF9-222ENST00000636048 EHMT2Q96KQ7 1210 aa14.26□□□□□ -0.13
ARHGEF9-222ENST00000636048 FAM9AQ8IZU1 332 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF9-222ENST00000636048 ZEB1P37275 1124 aaPredicted RBP14.22□□□□□ -0.13
ARHGEF9-222ENST00000636048 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
ARHGEF9-222ENST00000636048 MYT1Q01538 1121 aa14.21□□□□□ -0.14
ARHGEF9-222ENST00000636048 CENPBP07199 599 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF9-222ENST00000636048 APLP2Q06481 763 aa14.04□□□□□ -0.16
ARHGEF9-222ENST00000636048 TRIM26Q12899 539 aaPredicted RBP14.02□□□□□ -0.17
ARHGEF9-222ENST00000636048 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.17
ARHGEF9-222ENST00000636048 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.18
ARHGEF9-222ENST00000636048 TTBK1Q5TCY1 1321 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF9-222ENST00000636048 LOC105371045A0A1W2PR82 267 aa13.88□□□□□ -0.19
ARHGEF9-222ENST00000636048 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
ARHGEF9-222ENST00000636048 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
ARHGEF9-222ENST00000636048 GTF3C3Q9Y5Q9 886 aa13.63□□□□□ -0.23
ARHGEF9-222ENST00000636048 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
ARHGEF9-222ENST00000636048 ERICH6Q7L0X2 663 aa13.57□□□□□ -0.24
ARHGEF9-222ENST00000636048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF9-222ENST00000636048 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
ARHGEF9-222ENST00000636048 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.24
ARHGEF9-222ENST00000636048 ATP1B4Q9UN42 357 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF9-222ENST00000636048 NEFLP07196 543 aa13.43□□□□□ -0.26
ARHGEF9-222ENST00000636048 UBTFP17480 764 aaKnown RBP13.42□□□□□ -0.26
ARHGEF9-222ENST00000636048 DCAF1Q9Y4B6 1507 aa13.4□□□□□ -0.26
ARHGEF9-222ENST00000636048 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.27
ARHGEF9-222ENST00000636048 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
ARHGEF9-222ENST00000636048 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
ARHGEF9-222ENST00000636048 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
ARHGEF9-222ENST00000636048 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
ARHGEF9-222ENST00000636048 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF9-222ENST00000636048 BCANQ96GW7 911 aa13.14□□□□□ -0.31
ARHGEF9-222ENST00000636048 CCDC180Q9P1Z9 1646 aa13.08□□□□□ -0.32
ARHGEF9-222ENST00000636048 ITGAEP38570 1179 aa13.05□□□□□ -0.32
ARHGEF9-222ENST00000636048 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
ARHGEF9-222ENST00000636048 MIER1Q8N108 512 aa12.95□□□□□ -0.34
ARHGEF9-222ENST00000636048 ZCCHC6Q5VYS8 1495 aaKnown RBP12.94□□□□□ -0.34
ARHGEF9-222ENST00000636048 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF9-222ENST00000636048 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
ARHGEF9-222ENST00000636048 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF9-222ENST00000636048 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF9-222ENST00000636048 FKBP8Q14318 412 aa12.86□□□□□ -0.35
ARHGEF9-222ENST00000636048 ANP32EQ9BTT0 268 aa12.85□□□□□ -0.35
ARHGEF9-222ENST00000636048 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
ARHGEF9-222ENST00000636048 ANP32CO43423 234 aa12.8□□□□□ -0.36
ARHGEF9-222ENST00000636048 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF9-222ENST00000636048 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
ARHGEF9-222ENST00000636048 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
ARHGEF9-222ENST00000636048 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
ARHGEF9-222ENST00000636048 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
ARHGEF9-222ENST00000636048 DDX10Q13206 875 aaKnown RBP12.65□□□□□ -0.38
ARHGEF9-222ENST00000636048 TRIM52Q96A61 297 aa12.65□□□□□ -0.38
ARHGEF9-222ENST00000636048 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
ARHGEF9-222ENST00000636048 NBR1Q14596 966 aa12.59□□□□□ -0.39
ARHGEF9-222ENST00000636048 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
ARHGEF9-222ENST00000636048 CEP162Q5TB80 1403 aa12.55□□□□□ -0.4
ARHGEF9-222ENST00000636048 FBLN2P98095 1184 aa12.55□□□□□ -0.4
ARHGEF9-222ENST00000636048 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF9-222ENST00000636048 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF9-222ENST00000636048 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
ARHGEF9-222ENST00000636048 RSF1Q96T23 1441 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF9-222ENST00000636048 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
ARHGEF9-222ENST00000636048 SCRIBQ14160 1630 aa12.52□□□□□ -0.41
ARHGEF9-222ENST00000636048 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
ARHGEF9-222ENST00000636048 ESF1Q9H501 851 aaKnown RBP12.5□□□□□ -0.41
ARHGEF9-222ENST00000636048 NEFMP07197 916 aa12.48□□□□□ -0.41
ARHGEF9-222ENST00000636048 RBM19Q9Y4C8 960 aaKnown RBP12.47□□□□□ -0.41
ARHGEF9-222ENST00000636048 HIRIP3Q9BW71 556 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF9-222ENST00000636048 SLC24A1O60721 1099 aa12.46□□□□□ -0.42
ARHGEF9-222ENST00000636048 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
ARHGEF9-222ENST00000636048 CLIP1P30622 1438 aa12.43□□□□□ -0.42
ARHGEF9-222ENST00000636048 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
ARHGEF9-222ENST00000636048 TONSLQ96HA7 1378 aa12.42□□□□□ -0.42
ARHGEF9-222ENST00000636048 TNIKQ9UKE5 1360 aa12.41□□□□□ -0.42
ARHGEF9-222ENST00000636048 CCDC136Q96JN2 1154 aa12.4□□□□□ -0.43
ARHGEF9-222ENST00000636048 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
ARHGEF9-222ENST00000636048 ABCC9O60706 1549 aa12.37□□□□□ -0.43
ARHGEF9-222ENST00000636048 GOLGA3Q08378 1498 aa12.37□□□□□ -0.43
ARHGEF9-222ENST00000636048 ZNF326Q5BKZ1 582 aaKnown RBP12.36□□□□□ -0.43
ARHGEF9-222ENST00000636048 DEKP35659 375 aaKnown RBP12.35□□□□□ -0.43
ARHGEF9-222ENST00000636048 RB1CC1Q8TDY2 1594 aa12.34□□□□□ -0.43
ARHGEF9-222ENST00000636048 EEA1Q15075 1411 aa12.34□□□□□ -0.43
ARHGEF9-222ENST00000636048 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
ARHGEF9-222ENST00000636048 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
ARHGEF9-222ENST00000636048 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
ARHGEF9-222ENST00000636048 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
ARHGEF9-222ENST00000636048 NOP58Q9Y2X3 529 aaKnown RBP12.31□□□□□ -0.44
ARHGEF9-222ENST00000636048 PPP4R2Q9NY27 417 aa12.29□□□□□ -0.44
ARHGEF9-222ENST00000636048 CANXP27824 592 aaKnown RBP12.28□□□□□ -0.44
ARHGEF9-222ENST00000636048 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
ARHGEF9-222ENST00000636048 GLIPR1L2Q4G1C9 344 aa12.25□□□□□ -0.45
ARHGEF9-222ENST00000636048 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
ARHGEF9-222ENST00000636048 SOGA1O94964 1423 aa12.23□□□□□ -0.45
ARHGEF9-222ENST00000636048 KCNH8Q96L42 1107 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms