RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 NISCHQ9Y2I1 1504 aa14.86□□□□□ -0.03
CLRN1-202ENST00000327047 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
CLRN1-202ENST00000327047 ABCC9O60706 1549 aa14□□□□□ -0.17
CLRN1-202ENST00000327047 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
CLRN1-202ENST00000327047 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
CLRN1-202ENST00000327047 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
CLRN1-202ENST00000327047 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
CLRN1-202ENST00000327047 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
CLRN1-202ENST00000327047 NACADO15069 1562 aa12.92□□□□□ -0.34
CLRN1-202ENST00000327047 CUX2O14529 1486 aa12.91□□□□□ -0.34
CLRN1-202ENST00000327047 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
CLRN1-202ENST00000327047 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
CLRN1-202ENST00000327047 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
CLRN1-202ENST00000327047 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
CLRN1-202ENST00000327047 CECR2Q9BXF3 1484 aa12.87□□□□□ -0.35
CLRN1-202ENST00000327047 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
CLRN1-202ENST00000327047 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
CLRN1-202ENST00000327047 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.36
CLRN1-202ENST00000327047 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLRN1-202ENST00000327047 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
CLRN1-202ENST00000327047 MYO15BQ96JP2 1530 aa12.54□□□□□ -0.4
CLRN1-202ENST00000327047 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
CLRN1-202ENST00000327047 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
CLRN1-202ENST00000327047 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
CLRN1-202ENST00000327047 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
CLRN1-202ENST00000327047 HRCP23327 699 aa12.38□□□□□ -0.43
CLRN1-202ENST00000327047 ERCC6Q03468 1493 aa12.27□□□□□ -0.45
CLRN1-202ENST00000327047 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
CLRN1-202ENST00000327047 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.46
CLRN1-202ENST00000327047 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
CLRN1-202ENST00000327047 SUPT5HO00267 1087 aaKnown RBP12.17□□□□□ -0.46
CLRN1-202ENST00000327047 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
CLRN1-202ENST00000327047 THOC2Q8NI27 1593 aaKnown RBP12.13□□□□□ -0.47
CLRN1-202ENST00000327047 KCNA4P22459 653 aa12.12□□□□□ -0.47
CLRN1-202ENST00000327047 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
CLRN1-202ENST00000327047 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
CLRN1-202ENST00000327047 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
CLRN1-202ENST00000327047 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
CLRN1-202ENST00000327047 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
CLRN1-202ENST00000327047 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
CLRN1-202ENST00000327047 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
CLRN1-202ENST00000327047 SCRIBQ14160 1630 aa11.87□□□□□ -0.51
CLRN1-202ENST00000327047 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
CLRN1-202ENST00000327047 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
CLRN1-202ENST00000327047 NCAPD3P42695 1498 aa11.82□□□□□ -0.52
CLRN1-202ENST00000327047 OSCARQ8IYS5 282 aa11.81□□□□□ -0.52
CLRN1-202ENST00000327047 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
CLRN1-202ENST00000327047 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
CLRN1-202ENST00000327047 KIF21AQ7Z4S6 1674 aa11.76□□□□□ -0.53
CLRN1-202ENST00000327047 ARHGEF11O15085 1522 aa11.74□□□□□ -0.53
CLRN1-202ENST00000327047 WDR62O43379 1518 aa11.73□□□□□ -0.53
CLRN1-202ENST00000327047 LOC105371045A0A1W2PR82 267 aa11.72□□□□□ -0.53
CLRN1-202ENST00000327047 SMARCA2P51531 1590 aa11.71□□□□□ -0.54
CLRN1-202ENST00000327047 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
CLRN1-202ENST00000327047 NESP48681 1621 aa11.69□□□□□ -0.54
CLRN1-202ENST00000327047 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
CLRN1-202ENST00000327047 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
CLRN1-202ENST00000327047 MRC2Q9UBG0 1479 aa11.65□□□□□ -0.54
CLRN1-202ENST00000327047 ADRA2BP18089 450 aa11.63□□□□□ -0.55
CLRN1-202ENST00000327047 TRHP20396 242 aaPredicted RBP11.62□□□□□ -0.55
CLRN1-202ENST00000327047 ZEB1P37275 1124 aaPredicted RBP11.6□□□□□ -0.55
CLRN1-202ENST00000327047 AMER1Q5JTC6 1135 aaPredicted RBP11.59□□□□□ -0.55
CLRN1-202ENST00000327047 ERCC6L2Q5T890 1561 aa11.55□□□□□ -0.56
CLRN1-202ENST00000327047 ATAD2BQ9ULI0 1458 aa11.54□□□□□ -0.56
CLRN1-202ENST00000327047 MROH2BQ7Z745 1585 aa11.53□□□□□ -0.56
CLRN1-202ENST00000327047 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
CLRN1-202ENST00000327047 MYT1Q01538 1121 aa11.53□□□□□ -0.56
CLRN1-202ENST00000327047 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.57
CLRN1-202ENST00000327047 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
CLRN1-202ENST00000327047 SENP3Q9H4L4 574 aaPredicted RBP11.47□□□□□ -0.57
CLRN1-202ENST00000327047 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.58
CLRN1-202ENST00000327047 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
CLRN1-202ENST00000327047 WIZO95785 1651 aa11.42□□□□□ -0.58
CLRN1-202ENST00000327047 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
CLRN1-202ENST00000327047 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
CLRN1-202ENST00000327047 CYB5RLQ6IPT4 315 aa11.4□□□□□ -0.58
CLRN1-202ENST00000327047 PEG3Q9GZU2 1588 aa11.39□□□□□ -0.59
CLRN1-202ENST00000327047 BAZ1BQ9UIG0 1483 aaKnown RBP11.36□□□□□ -0.59
CLRN1-202ENST00000327047 FBXO41Q8TF61 875 aa11.35□□□□□ -0.59
CLRN1-202ENST00000327047 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
CLRN1-202ENST00000327047 CEP164Q9UPV0 1460 aa11.34□□□□□ -0.59
CLRN1-202ENST00000327047 LMTK3Q96Q04 1460 aa11.33□□□□□ -0.6
CLRN1-202ENST00000327047 SOCS7O14512 581 aa11.33□□□□□ -0.6
CLRN1-202ENST00000327047 ZBTB22O15209 634 aa11.31□□□□□ -0.6
CLRN1-202ENST00000327047 CHD1O14646 1710 aa11.3□□□□□ -0.6
CLRN1-202ENST00000327047 CENPBP07199 599 aaPredicted RBP11.3□□□□□ -0.6
CLRN1-202ENST00000327047 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
CLRN1-202ENST00000327047 FAM9AQ8IZU1 332 aaPredicted RBP11.27□□□□□ -0.6
CLRN1-202ENST00000327047 TOP2AP11388 1531 aaKnown RBP11.26□□□□□ -0.61
CLRN1-202ENST00000327047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.26□□□□□ -0.61
CLRN1-202ENST00000327047 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
CLRN1-202ENST00000327047 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
CLRN1-202ENST00000327047 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
CLRN1-202ENST00000327047 IFT140Q96RY7 1462 aa11.22□□□□□ -0.61
CLRN1-202ENST00000327047 HECW2Q9P2P5 1572 aa11.2□□□□□ -0.62
CLRN1-202ENST00000327047 CLASP1Q7Z460 1538 aa11.2□□□□□ -0.62
CLRN1-202ENST00000327047 KIF13AQ9H1H9 1805 aa11.18□□□□□ -0.62
CLRN1-202ENST00000327047 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
CLRN1-202ENST00000327047 EIF4G3O43432 1585 aaKnown RBP11.15□□□□□ -0.62
CLRN1-202ENST00000327047 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms