RNA–Protein interactions for RNA: ENST00000560361.5

ZHX3-217, Transcript of zinc fingers and homeoboxes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZHX3, Length 4,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-217ENST00000560361 NISCHQ9Y2I1 1504 aa14.52□□□□□ -0.08
ZHX3-217ENST00000560361 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.36
ZHX3-217ENST00000560361 SHROOM4Q9ULL8 1493 aa12.51□□□□□ -0.41
ZHX3-217ENST00000560361 CCDC180Q9P1Z9 1646 aa12.4□□□□□ -0.43
ZHX3-217ENST00000560361 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
ZHX3-217ENST00000560361 ZCCHC6Q5VYS8 1495 aaKnown RBP12.15□□□□□ -0.47
ZHX3-217ENST00000560361 ABCC9O60706 1549 aa12.15□□□□□ -0.47
ZHX3-217ENST00000560361 MYO15BQ96JP2 1530 aa11.9□□□□□ -0.5
ZHX3-217ENST00000560361 CHIC1Q5VXU3 224 aa11.88□□□□□ -0.51
ZHX3-217ENST00000560361 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.52
ZHX3-217ENST00000560361 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.52
ZHX3-217ENST00000560361 SCRIBQ14160 1630 aa11.73□□□□□ -0.53
ZHX3-217ENST00000560361 HRCP23327 699 aa11.72□□□□□ -0.53
ZHX3-217ENST00000560361 NACADO15069 1562 aa11.71□□□□□ -0.53
ZHX3-217ENST00000560361 LOC105371045A0A1W2PR82 267 aa11.68□□□□□ -0.54
ZHX3-217ENST00000560361 PPARGC1BQ86YN6 1023 aaKnown RBP11.68□□□□□ -0.54
ZHX3-217ENST00000560361 RB1CC1Q8TDY2 1594 aa11.66□□□□□ -0.54
ZHX3-217ENST00000560361 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
ZHX3-217ENST00000560361 EHMT2Q96KQ7 1210 aa11.49□□□□□ -0.57
ZHX3-217ENST00000560361 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
ZHX3-217ENST00000560361 RSF1Q96T23 1441 aaPredicted RBP11.39□□□□□ -0.59
ZHX3-217ENST00000560361 CECR2Q9BXF3 1484 aa11.37□□□□□ -0.59
ZHX3-217ENST00000560361 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
ZHX3-217ENST00000560361 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
ZHX3-217ENST00000560361 MROH2BQ7Z745 1585 aa11.25□□□□□ -0.61
ZHX3-217ENST00000560361 BAZ1AQ9NRL2 1556 aaPredicted RBP11.24□□□□□ -0.61
ZHX3-217ENST00000560361 TTBK1Q5TCY1 1321 aaPredicted RBP11.12□□□□□ -0.63
ZHX3-217ENST00000560361 WIZO95785 1651 aa11.12□□□□□ -0.63
ZHX3-217ENST00000560361 BICRAQ9NZM4 1560 aa11.1□□□□□ -0.63
ZHX3-217ENST00000560361 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
ZHX3-217ENST00000560361 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
ZHX3-217ENST00000560361 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
ZHX3-217ENST00000560361 ZEB1P37275 1124 aaPredicted RBP11.06□□□□□ -0.64
ZHX3-217ENST00000560361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.04□□□□□ -0.64
ZHX3-217ENST00000560361 TOP2AP11388 1531 aaKnown RBP11.01□□□□□ -0.65
ZHX3-217ENST00000560361 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
ZHX3-217ENST00000560361 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
ZHX3-217ENST00000560361 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
ZHX3-217ENST00000560361 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
ZHX3-217ENST00000560361 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.65
ZHX3-217ENST00000560361 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
ZHX3-217ENST00000560361 EIF4G1Q04637 1599 aaKnown RBP10.91□□□□□ -0.66
ZHX3-217ENST00000560361 ABCC8Q09428 1581 aa10.9□□□□□ -0.67
ZHX3-217ENST00000560361 RANGAP1P46060 587 aaPredicted RBP10.88□□□□□ -0.67
ZHX3-217ENST00000560361 NCAPD3P42695 1498 aa10.85□□□□□ -0.67
ZHX3-217ENST00000560361 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
ZHX3-217ENST00000560361 SOGA1O94964 1423 aa10.83□□□□□ -0.68
ZHX3-217ENST00000560361 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
ZHX3-217ENST00000560361 NEUROD1Q13562 356 aa10.81□□□□□ -0.68
ZHX3-217ENST00000560361 RUSC2Q8N2Y8 1516 aa10.79□□□□□ -0.68
ZHX3-217ENST00000560361 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
ZHX3-217ENST00000560361 CEP162Q5TB80 1403 aa10.78□□□□□ -0.68
ZHX3-217ENST00000560361 DIEXFQ68CQ4 756 aaKnown RBP10.78□□□□□ -0.68
ZHX3-217ENST00000560361 APLP2Q06481 763 aa10.76□□□□□ -0.69
ZHX3-217ENST00000560361 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
ZHX3-217ENST00000560361 CC2D2AQ9P2K1 1620 aa10.75□□□□□ -0.69
ZHX3-217ENST00000560361 HMGXB3Q12766 1538 aa10.75□□□□□ -0.69
ZHX3-217ENST00000560361 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
ZHX3-217ENST00000560361 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
ZHX3-217ENST00000560361 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.69
ZHX3-217ENST00000560361 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.69
ZHX3-217ENST00000560361 EEA1Q15075 1411 aa10.69□□□□□ -0.7
ZHX3-217ENST00000560361 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
ZHX3-217ENST00000560361 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
ZHX3-217ENST00000560361 CFTRP13569 1480 aa10.64□□□□□ -0.71
ZHX3-217ENST00000560361 CENPBP07199 599 aaPredicted RBP10.63□□□□□ -0.71
ZHX3-217ENST00000560361 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
ZHX3-217ENST00000560361 ATP1B4Q9UN42 357 aaPredicted RBP10.62□□□□□ -0.71
ZHX3-217ENST00000560361 ZNF316A6NFI3 1004 aaPredicted RBP10.62□□□□□ -0.71
ZHX3-217ENST00000560361 GOLGA3Q08378 1498 aa10.6□□□□□ -0.71
ZHX3-217ENST00000560361 KIF27Q86VH2 1401 aa10.6□□□□□ -0.71
ZHX3-217ENST00000560361 PDS5BQ9NTI5 1447 aa10.6□□□□□ -0.71
ZHX3-217ENST00000560361 FANCD2Q9BXW9 1451 aa10.6□□□□□ -0.71
ZHX3-217ENST00000560361 MIER1Q8N108 512 aa10.58□□□□□ -0.72
ZHX3-217ENST00000560361 NESP48681 1621 aa10.57□□□□□ -0.72
ZHX3-217ENST00000560361 SYNJ1O43426 1573 aa10.56□□□□□ -0.72
ZHX3-217ENST00000560361 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
ZHX3-217ENST00000560361 CLIP1P30622 1438 aa10.56□□□□□ -0.72
ZHX3-217ENST00000560361 CUX2O14529 1486 aa10.56□□□□□ -0.72
ZHX3-217ENST00000560361 ERCC6Q03468 1493 aa10.52□□□□□ -0.73
ZHX3-217ENST00000560361 RAPGEF2Q9Y4G8 1499 aa10.52□□□□□ -0.73
ZHX3-217ENST00000560361 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
ZHX3-217ENST00000560361 CUX1P39880 1505 aa10.5□□□□□ -0.73
ZHX3-217ENST00000560361 FBLN2P98095 1184 aa10.49□□□□□ -0.73
ZHX3-217ENST00000560361 FGD5Q6ZNL6 1462 aa10.48□□□□□ -0.73
ZHX3-217ENST00000560361 TOP2BQ02880 1626 aa10.48□□□□□ -0.73
ZHX3-217ENST00000560361 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
ZHX3-217ENST00000560361 VPS8Q8N3P4 1428 aa10.47□□□□□ -0.73
ZHX3-217ENST00000560361 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
ZHX3-217ENST00000560361 ITGAEP38570 1179 aa10.45□□□□□ -0.74
ZHX3-217ENST00000560361 RAD54L2Q9Y4B4 1467 aa10.44□□□□□ -0.74
ZHX3-217ENST00000560361 KANK4Q5T7N3 995 aaPredicted RBP10.44□□□□□ -0.74
ZHX3-217ENST00000560361 KIF21BO75037 1637 aa10.43□□□□□ -0.74
ZHX3-217ENST00000560361 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
ZHX3-217ENST00000560361 IGF1RP08069 1367 aa10.42□□□□□ -0.74
ZHX3-217ENST00000560361 TOPBP1Q92547 1522 aa10.41□□□□□ -0.74
ZHX3-217ENST00000560361 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
ZHX3-217ENST00000560361 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
ZHX3-217ENST00000560361 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
ZHX3-217ENST00000560361 BIVM-ERCC5R4GMW8 1640 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms