RNA–Protein interactions for RNA: ENST00000304267.12

SEC61A2-202, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A2, Length 2,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-202ENST00000304267 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
SEC61A2-202ENST00000304267 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
SEC61A2-202ENST00000304267 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.45
SEC61A2-202ENST00000304267 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
SEC61A2-202ENST00000304267 FOXD1Q16676 465 aa16.58■□□□□ 0.24
SEC61A2-202ENST00000304267 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
SEC61A2-202ENST00000304267 MSH5O43196 834 aa15.8■□□□□ 0.12
SEC61A2-202ENST00000304267 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
SEC61A2-202ENST00000304267 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
SEC61A2-202ENST00000304267 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
SEC61A2-202ENST00000304267 ADRA2BP18089 450 aa15.07■□□□□ 0
SEC61A2-202ENST00000304267 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
SEC61A2-202ENST00000304267 ABCC9O60706 1549 aa14.12□□□□□ -0.15
SEC61A2-202ENST00000304267 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
SEC61A2-202ENST00000304267 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
SEC61A2-202ENST00000304267 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
SEC61A2-202ENST00000304267 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
SEC61A2-202ENST00000304267 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
SEC61A2-202ENST00000304267 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
SEC61A2-202ENST00000304267 CCDC180Q9P1Z9 1646 aa13.54□□□□□ -0.24
SEC61A2-202ENST00000304267 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.24
SEC61A2-202ENST00000304267 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
SEC61A2-202ENST00000304267 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
SEC61A2-202ENST00000304267 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.28
SEC61A2-202ENST00000304267 RB1CC1Q8TDY2 1594 aa13.25□□□□□ -0.29
SEC61A2-202ENST00000304267 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
SEC61A2-202ENST00000304267 CNKSR2Q8WXI2 1034 aa13.16□□□□□ -0.3
SEC61A2-202ENST00000304267 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
SEC61A2-202ENST00000304267 NACADO15069 1562 aa12.98□□□□□ -0.33
SEC61A2-202ENST00000304267 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEC61A2-202ENST00000304267 CECR2Q9BXF3 1484 aa12.88□□□□□ -0.35
SEC61A2-202ENST00000304267 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
SEC61A2-202ENST00000304267 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
SEC61A2-202ENST00000304267 CC2D2AQ9P2K1 1620 aa12.79□□□□□ -0.36
SEC61A2-202ENST00000304267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEC61A2-202ENST00000304267 SHROOM4Q9ULL8 1493 aa12.77□□□□□ -0.37
SEC61A2-202ENST00000304267 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
SEC61A2-202ENST00000304267 CUX2O14529 1486 aa12.7□□□□□ -0.38
SEC61A2-202ENST00000304267 MYO15BQ96JP2 1530 aa12.59□□□□□ -0.39
SEC61A2-202ENST00000304267 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
SEC61A2-202ENST00000304267 POTEHQ6S545 545 aa12.55□□□□□ -0.4
SEC61A2-202ENST00000304267 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
SEC61A2-202ENST00000304267 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
SEC61A2-202ENST00000304267 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
SEC61A2-202ENST00000304267 NPM3O75607 178 aaKnown RBP12.41□□□□□ -0.42
SEC61A2-202ENST00000304267 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
SEC61A2-202ENST00000304267 CAPN15O75808 1086 aa12.38□□□□□ -0.43
SEC61A2-202ENST00000304267 DSG3P32926 999 aa12.37□□□□□ -0.43
SEC61A2-202ENST00000304267 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
SEC61A2-202ENST00000304267 ERCC6Q03468 1493 aa12.32□□□□□ -0.44
SEC61A2-202ENST00000304267 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
SEC61A2-202ENST00000304267 APLP2Q06481 763 aa12.16□□□□□ -0.46
SEC61A2-202ENST00000304267 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
SEC61A2-202ENST00000304267 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
SEC61A2-202ENST00000304267 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
SEC61A2-202ENST00000304267 THOC2Q8NI27 1593 aaKnown RBP12.04□□□□□ -0.48
SEC61A2-202ENST00000304267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
SEC61A2-202ENST00000304267 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
SEC61A2-202ENST00000304267 ABCB7O75027 752 aa12□□□□□ -0.49
SEC61A2-202ENST00000304267 NCAPD3P42695 1498 aa11.95□□□□□ -0.5
SEC61A2-202ENST00000304267 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
SEC61A2-202ENST00000304267 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
SEC61A2-202ENST00000304267 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
SEC61A2-202ENST00000304267 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
SEC61A2-202ENST00000304267 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
SEC61A2-202ENST00000304267 NESP48681 1621 aa11.86□□□□□ -0.51
SEC61A2-202ENST00000304267 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
SEC61A2-202ENST00000304267 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
SEC61A2-202ENST00000304267 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
SEC61A2-202ENST00000304267 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
SEC61A2-202ENST00000304267 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
SEC61A2-202ENST00000304267 SMARCA2P51531 1590 aa11.8□□□□□ -0.52
SEC61A2-202ENST00000304267 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
SEC61A2-202ENST00000304267 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
SEC61A2-202ENST00000304267 KIF21AQ7Z4S6 1674 aa11.76□□□□□ -0.53
SEC61A2-202ENST00000304267 KCNA4P22459 653 aa11.76□□□□□ -0.53
SEC61A2-202ENST00000304267 ATAD2BQ9ULI0 1458 aa11.73□□□□□ -0.53
SEC61A2-202ENST00000304267 WDR62O43379 1518 aa11.71□□□□□ -0.53
SEC61A2-202ENST00000304267 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.54
SEC61A2-202ENST00000304267 ARHGEF11O15085 1522 aa11.68□□□□□ -0.54
SEC61A2-202ENST00000304267 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.54
SEC61A2-202ENST00000304267 POLA2Q14181 598 aa11.63□□□□□ -0.55
SEC61A2-202ENST00000304267 BAZ1BQ9UIG0 1483 aaKnown RBP11.58□□□□□ -0.56
SEC61A2-202ENST00000304267 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
SEC61A2-202ENST00000304267 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
SEC61A2-202ENST00000304267 CYB5RLQ6IPT4 315 aa11.55□□□□□ -0.56
SEC61A2-202ENST00000304267 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
SEC61A2-202ENST00000304267 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
SEC61A2-202ENST00000304267 CADPSQ9ULU8 1353 aa11.5□□□□□ -0.57
SEC61A2-202ENST00000304267 ARAP1Q96P48 1450 aa11.49□□□□□ -0.57
SEC61A2-202ENST00000304267 PEG3Q9GZU2 1588 aa11.49□□□□□ -0.57
SEC61A2-202ENST00000304267 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
SEC61A2-202ENST00000304267 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
SEC61A2-202ENST00000304267 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
SEC61A2-202ENST00000304267 MROH2BQ7Z745 1585 aa11.44□□□□□ -0.58
SEC61A2-202ENST00000304267 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
SEC61A2-202ENST00000304267 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
SEC61A2-202ENST00000304267 FANCD2Q9BXW9 1451 aa11.35□□□□□ -0.59
SEC61A2-202ENST00000304267 HAX1O00165 279 aa11.33□□□□□ -0.6
SEC61A2-202ENST00000304267 IFT140Q96RY7 1462 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms