RNA–Protein interactions for RNA: ENST00000414680.1

RPL35AP3-201, Transcript of ribosomal protein L35a pseudogene 3, humanhuman

BASIC

Gene RPL35AP3, Length 288 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP3-201ENST00000414680 NISCHQ9Y2I1 1504 aa14.58□□□□□ -0.08
RPL35AP3-201ENST00000414680 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
RPL35AP3-201ENST00000414680 ABCC9O60706 1549 aa12.45□□□□□ -0.42
RPL35AP3-201ENST00000414680 ZCCHC6Q5VYS8 1495 aaKnown RBP12.16□□□□□ -0.46
RPL35AP3-201ENST00000414680 MYO15BQ96JP2 1530 aa12.1□□□□□ -0.47
RPL35AP3-201ENST00000414680 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
RPL35AP3-201ENST00000414680 NACADO15069 1562 aa12.08□□□□□ -0.48
RPL35AP3-201ENST00000414680 RB1CC1Q8TDY2 1594 aa12.03□□□□□ -0.48
RPL35AP3-201ENST00000414680 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
RPL35AP3-201ENST00000414680 UNC13AQ9UPW8 1703 aa11.85□□□□□ -0.51
RPL35AP3-201ENST00000414680 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
RPL35AP3-201ENST00000414680 SCRIBQ14160 1630 aa11.71□□□□□ -0.53
RPL35AP3-201ENST00000414680 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
RPL35AP3-201ENST00000414680 SHROOM4Q9ULL8 1493 aa11.57□□□□□ -0.56
RPL35AP3-201ENST00000414680 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
RPL35AP3-201ENST00000414680 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
RPL35AP3-201ENST00000414680 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
RPL35AP3-201ENST00000414680 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
RPL35AP3-201ENST00000414680 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
RPL35AP3-201ENST00000414680 SMARCA4P51532 1647 aa11.26□□□□□ -0.61
RPL35AP3-201ENST00000414680 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
RPL35AP3-201ENST00000414680 BAZ1AQ9NRL2 1556 aaPredicted RBP11.24□□□□□ -0.61
RPL35AP3-201ENST00000414680 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
RPL35AP3-201ENST00000414680 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
RPL35AP3-201ENST00000414680 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
RPL35AP3-201ENST00000414680 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
RPL35AP3-201ENST00000414680 SMARCA2P51531 1590 aa11.14□□□□□ -0.63
RPL35AP3-201ENST00000414680 WIZO95785 1651 aa11.11□□□□□ -0.63
RPL35AP3-201ENST00000414680 HMGXB3Q12766 1538 aa11.1□□□□□ -0.63
RPL35AP3-201ENST00000414680 BAZ1BQ9UIG0 1483 aaKnown RBP11.04□□□□□ -0.64
RPL35AP3-201ENST00000414680 TOP2AP11388 1531 aaKnown RBP10.98□□□□□ -0.65
RPL35AP3-201ENST00000414680 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
RPL35AP3-201ENST00000414680 SUPT5HO00267 1087 aaKnown RBP10.87□□□□□ -0.67
RPL35AP3-201ENST00000414680 NESP48681 1621 aa10.85□□□□□ -0.67
RPL35AP3-201ENST00000414680 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
RPL35AP3-201ENST00000414680 LAMC3Q9Y6N6 1575 aa10.82□□□□□ -0.68
RPL35AP3-201ENST00000414680 CFTRP13569 1480 aa10.81□□□□□ -0.68
RPL35AP3-201ENST00000414680 CHIC1Q5VXU3 224 aa10.77□□□□□ -0.69
RPL35AP3-201ENST00000414680 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
RPL35AP3-201ENST00000414680 KIF21AQ7Z4S6 1674 aa10.72□□□□□ -0.69
RPL35AP3-201ENST00000414680 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
RPL35AP3-201ENST00000414680 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
RPL35AP3-201ENST00000414680 THOC2Q8NI27 1593 aaKnown RBP10.66□□□□□ -0.7
RPL35AP3-201ENST00000414680 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
RPL35AP3-201ENST00000414680 CEP164Q9UPV0 1460 aa10.63□□□□□ -0.71
RPL35AP3-201ENST00000414680 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
RPL35AP3-201ENST00000414680 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
RPL35AP3-201ENST00000414680 WDR62O43379 1518 aa10.59□□□□□ -0.71
RPL35AP3-201ENST00000414680 CUX2O14529 1486 aa10.57□□□□□ -0.72
RPL35AP3-201ENST00000414680 TOPBP1Q92547 1522 aa10.54□□□□□ -0.72
RPL35AP3-201ENST00000414680 ABCC8Q09428 1581 aa10.53□□□□□ -0.72
RPL35AP3-201ENST00000414680 CUX1P39880 1505 aa10.53□□□□□ -0.72
RPL35AP3-201ENST00000414680 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.72
RPL35AP3-201ENST00000414680 POLA1P09884 1462 aaPredicted RBP10.47□□□□□ -0.73
RPL35AP3-201ENST00000414680 BIVM-ERCC5R4GMW8 1640 aa10.47□□□□□ -0.73
RPL35AP3-201ENST00000414680 WRNQ14191 1432 aaPredicted RBP eCLIP10.46□□□□□ -0.74
RPL35AP3-201ENST00000414680 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
RPL35AP3-201ENST00000414680 TOP2BQ02880 1626 aa10.46□□□□□ -0.74
RPL35AP3-201ENST00000414680 TARBP1Q13395 1621 aaKnown RBP10.45□□□□□ -0.74
RPL35AP3-201ENST00000414680 FGD5Q6ZNL6 1462 aa10.44□□□□□ -0.74
RPL35AP3-201ENST00000414680 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
RPL35AP3-201ENST00000414680 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
RPL35AP3-201ENST00000414680 SOGA1O94964 1423 aa10.41□□□□□ -0.74
RPL35AP3-201ENST00000414680 ZNF608Q9ULD9 1512 aaPredicted RBP10.4□□□□□ -0.74
RPL35AP3-201ENST00000414680 WDR97A6NE52 1622 aa10.39□□□□□ -0.75
RPL35AP3-201ENST00000414680 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
RPL35AP3-201ENST00000414680 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPL35AP3-201ENST00000414680 TDRD9Q8NDG6 1382 aaKnown RBP10.34□□□□□ -0.75
RPL35AP3-201ENST00000414680 EIF4G3O43432 1585 aaKnown RBP10.33□□□□□ -0.76
RPL35AP3-201ENST00000414680 ABCA5Q8WWZ7 1642 aa10.32□□□□□ -0.76
RPL35AP3-201ENST00000414680 GAPVD1Q14C86 1478 aa10.28□□□□□ -0.76
RPL35AP3-201ENST00000414680 GRIN2BQ13224 1484 aa10.26□□□□□ -0.77
RPL35AP3-201ENST00000414680 TRIM41Q8WV44 630 aa10.26□□□□□ -0.77
RPL35AP3-201ENST00000414680 PBRM1Q86U86 1689 aa10.25□□□□□ -0.77
RPL35AP3-201ENST00000414680 RUSC2Q8N2Y8 1516 aa10.25□□□□□ -0.77
RPL35AP3-201ENST00000414680 IGF1RP08069 1367 aa10.24□□□□□ -0.77
RPL35AP3-201ENST00000414680 ERICH3Q5RHP9 1530 aa10.23□□□□□ -0.77
RPL35AP3-201ENST00000414680 SNAPC4Q5SXM2 1469 aa10.23□□□□□ -0.77
RPL35AP3-201ENST00000414680 MAGI1Q96QZ7 1491 aaPredicted RBP10.23□□□□□ -0.77
RPL35AP3-201ENST00000414680 KIF27Q86VH2 1401 aa10.22□□□□□ -0.77
RPL35AP3-201ENST00000414680 CHD1O14646 1710 aa10.19□□□□□ -0.78
RPL35AP3-201ENST00000414680 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
RPL35AP3-201ENST00000414680 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
RPL35AP3-201ENST00000414680 FHAD1B1AJZ9 1412 aa10.17□□□□□ -0.78
RPL35AP3-201ENST00000414680 DNAJC5Q9H3Z4 198 aa10.16□□□□□ -0.78
RPL35AP3-201ENST00000414680 OSCARQ8IYS5 282 aa10.14□□□□□ -0.79
RPL35AP3-201ENST00000414680 GRIN2AQ12879 1464 aa10.14□□□□□ -0.79
RPL35AP3-201ENST00000414680 CARMIL1Q5VZK9 1371 aa10.14□□□□□ -0.79
RPL35AP3-201ENST00000414680 CUL7Q14999 1698 aa10.13□□□□□ -0.79
RPL35AP3-201ENST00000414680 PRXQ9BXM0 1461 aa10.13□□□□□ -0.79
RPL35AP3-201ENST00000414680 CHMP7Q8WUX9 453 aaPredicted RBP10.13□□□□□ -0.79
RPL35AP3-201ENST00000414680 NUP160Q12769 1436 aa10.13□□□□□ -0.79
RPL35AP3-201ENST00000414680 CLASP1Q7Z460 1538 aa10.12□□□□□ -0.79
RPL35AP3-201ENST00000414680 EEA1Q15075 1411 aa10.11□□□□□ -0.79
RPL35AP3-201ENST00000414680 CSRNP3Q8WYN3 585 aa10.11□□□□□ -0.79
RPL35AP3-201ENST00000414680 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
RPL35AP3-201ENST00000414680 FBLN2P98095 1184 aa10.1□□□□□ -0.79
RPL35AP3-201ENST00000414680 RAPGEF2Q9Y4G8 1499 aa10.07□□□□□ -0.8
RPL35AP3-201ENST00000414680 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
RPL35AP3-201ENST00000414680 KIAA0586Q9BVV6 1533 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms