RNA–Protein interactions for RNA: ENST00000440213.1

LINC01449-201, Transcript of long intergenic non-protein coding RNA 1449, humanhuman

TSL 1 (best) BASIC

Gene LINC01449, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01449-201ENST00000440213 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
LINC01449-201ENST00000440213 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
LINC01449-201ENST00000440213 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
LINC01449-201ENST00000440213 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
LINC01449-201ENST00000440213 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
LINC01449-201ENST00000440213 FOXD1Q16676 465 aa17.94■□□□□ 0.46
LINC01449-201ENST00000440213 ADRA2BP18089 450 aa17.54■□□□□ 0.4
LINC01449-201ENST00000440213 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
LINC01449-201ENST00000440213 PIAS4Q8N2W9 510 aaPredicted RBP17.05■□□□□ 0.32
LINC01449-201ENST00000440213 KCNA4P22459 653 aa16.44■□□□□ 0.22
LINC01449-201ENST00000440213 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
LINC01449-201ENST00000440213 MSH5O43196 834 aa16.4■□□□□ 0.22
LINC01449-201ENST00000440213 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
LINC01449-201ENST00000440213 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
LINC01449-201ENST00000440213 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
LINC01449-201ENST00000440213 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
LINC01449-201ENST00000440213 MAPK8IP2Q13387 824 aaPredicted RBP15.81■□□□□ 0.12
LINC01449-201ENST00000440213 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
LINC01449-201ENST00000440213 SLC4A1APQ9BWU0 796 aaKnown RBP15.71■□□□□ 0.11
LINC01449-201ENST00000440213 DMRT2Q9Y5R5 561 aa15.51■□□□□ 0.07
LINC01449-201ENST00000440213 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
LINC01449-201ENST00000440213 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
LINC01449-201ENST00000440213 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
LINC01449-201ENST00000440213 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
LINC01449-201ENST00000440213 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
LINC01449-201ENST00000440213 ZBTB22O15209 634 aa15.16■□□□□ 0.02
LINC01449-201ENST00000440213 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
LINC01449-201ENST00000440213 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
LINC01449-201ENST00000440213 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
LINC01449-201ENST00000440213 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
LINC01449-201ENST00000440213 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
LINC01449-201ENST00000440213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC01449-201ENST00000440213 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
LINC01449-201ENST00000440213 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
LINC01449-201ENST00000440213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
LINC01449-201ENST00000440213 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
LINC01449-201ENST00000440213 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
LINC01449-201ENST00000440213 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
LINC01449-201ENST00000440213 APLP2Q06481 763 aa14.1□□□□□ -0.15
LINC01449-201ENST00000440213 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
LINC01449-201ENST00000440213 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
LINC01449-201ENST00000440213 ZNF219Q9P2Y4 722 aaPredicted RBP13.95□□□□□ -0.18
LINC01449-201ENST00000440213 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
LINC01449-201ENST00000440213 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
LINC01449-201ENST00000440213 CAPN15O75808 1086 aa13.88□□□□□ -0.19
LINC01449-201ENST00000440213 FKBP8Q14318 412 aa13.86□□□□□ -0.19
LINC01449-201ENST00000440213 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
LINC01449-201ENST00000440213 POLA2Q14181 598 aa13.7□□□□□ -0.22
LINC01449-201ENST00000440213 ABCB7O75027 752 aa13.69□□□□□ -0.22
LINC01449-201ENST00000440213 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
LINC01449-201ENST00000440213 FBLN2P98095 1184 aa13.61□□□□□ -0.23
LINC01449-201ENST00000440213 DSG3P32926 999 aa13.53□□□□□ -0.24
LINC01449-201ENST00000440213 ZBTB12Q9Y330 459 aaPredicted RBP13.5□□□□□ -0.25
LINC01449-201ENST00000440213 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
LINC01449-201ENST00000440213 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
LINC01449-201ENST00000440213 PROM2Q8N271 834 aa13.27□□□□□ -0.29
LINC01449-201ENST00000440213 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.29
LINC01449-201ENST00000440213 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
LINC01449-201ENST00000440213 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
LINC01449-201ENST00000440213 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
LINC01449-201ENST00000440213 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
LINC01449-201ENST00000440213 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
LINC01449-201ENST00000440213 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
LINC01449-201ENST00000440213 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
LINC01449-201ENST00000440213 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
LINC01449-201ENST00000440213 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
LINC01449-201ENST00000440213 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC01449-201ENST00000440213 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
LINC01449-201ENST00000440213 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
LINC01449-201ENST00000440213 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
LINC01449-201ENST00000440213 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
LINC01449-201ENST00000440213 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
LINC01449-201ENST00000440213 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
LINC01449-201ENST00000440213 MIER1Q8N108 512 aa12.73□□□□□ -0.37
LINC01449-201ENST00000440213 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
LINC01449-201ENST00000440213 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
LINC01449-201ENST00000440213 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
LINC01449-201ENST00000440213 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
LINC01449-201ENST00000440213 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
LINC01449-201ENST00000440213 ABCC9O60706 1549 aa12.6□□□□□ -0.39
LINC01449-201ENST00000440213 PKD2Q13563 968 aa12.59□□□□□ -0.39
LINC01449-201ENST00000440213 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
LINC01449-201ENST00000440213 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
LINC01449-201ENST00000440213 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
LINC01449-201ENST00000440213 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
LINC01449-201ENST00000440213 ZCCHC6Q5VYS8 1495 aaKnown RBP12.49□□□□□ -0.41
LINC01449-201ENST00000440213 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
LINC01449-201ENST00000440213 CREBZFQ9NS37 354 aa12.48□□□□□ -0.41
LINC01449-201ENST00000440213 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
LINC01449-201ENST00000440213 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
LINC01449-201ENST00000440213 DCAF1Q9Y4B6 1507 aa12.38□□□□□ -0.43
LINC01449-201ENST00000440213 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
LINC01449-201ENST00000440213 NUBP1P53384 320 aa12.37□□□□□ -0.43
LINC01449-201ENST00000440213 RGL2O15211 777 aa12.35□□□□□ -0.43
LINC01449-201ENST00000440213 MYO15BQ96JP2 1530 aa12.35□□□□□ -0.43
LINC01449-201ENST00000440213 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
LINC01449-201ENST00000440213 NACADO15069 1562 aa12.33□□□□□ -0.44
LINC01449-201ENST00000440213 GSE1Q14687 1217 aa12.32□□□□□ -0.44
LINC01449-201ENST00000440213 FAM212AQ96EL1 285 aa12.31□□□□□ -0.44
LINC01449-201ENST00000440213 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms