RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 NISCHQ9Y2I1 1504 aa14.95□□□□□ -0.02
CASC18-202ENST00000548557 AEBP2Q6ZN18 517 aaPredicted RBP14.06□□□□□ -0.16
CASC18-202ENST00000548557 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
CASC18-202ENST00000548557 CCDC180Q9P1Z9 1646 aa13.15□□□□□ -0.31
CASC18-202ENST00000548557 ABCC9O60706 1549 aa12.57□□□□□ -0.4
CASC18-202ENST00000548557 ZCCHC6Q5VYS8 1495 aaKnown RBP12.51□□□□□ -0.41
CASC18-202ENST00000548557 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
CASC18-202ENST00000548557 DCAF8L2P0C7V8 631 aa12.37□□□□□ -0.43
CASC18-202ENST00000548557 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
CASC18-202ENST00000548557 NACADO15069 1562 aa12.31□□□□□ -0.44
CASC18-202ENST00000548557 RB1CC1Q8TDY2 1594 aa12.25□□□□□ -0.45
CASC18-202ENST00000548557 PHF23Q9BUL5 403 aaPredicted RBP12.2□□□□□ -0.46
CASC18-202ENST00000548557 SLC24A1O60721 1099 aa12.1□□□□□ -0.47
CASC18-202ENST00000548557 SCRIBQ14160 1630 aa11.99□□□□□ -0.49
CASC18-202ENST00000548557 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
CASC18-202ENST00000548557 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
CASC18-202ENST00000548557 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
CASC18-202ENST00000548557 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
CASC18-202ENST00000548557 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
CASC18-202ENST00000548557 CECR2Q9BXF3 1484 aa11.59□□□□□ -0.55
CASC18-202ENST00000548557 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.56
CASC18-202ENST00000548557 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
CASC18-202ENST00000548557 SMARCA4P51532 1647 aa11.51□□□□□ -0.57
CASC18-202ENST00000548557 MROH2BQ7Z745 1585 aa11.51□□□□□ -0.57
CASC18-202ENST00000548557 RSF1Q96T23 1441 aaPredicted RBP11.5□□□□□ -0.57
CASC18-202ENST00000548557 PEG3Q9GZU2 1588 aa11.43□□□□□ -0.58
CASC18-202ENST00000548557 SUPT5HO00267 1087 aaKnown RBP11.42□□□□□ -0.58
CASC18-202ENST00000548557 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
CASC18-202ENST00000548557 ATAD2BQ9ULI0 1458 aa11.4□□□□□ -0.58
CASC18-202ENST00000548557 CC2D2AQ9P2K1 1620 aa11.39□□□□□ -0.59
CASC18-202ENST00000548557 WIZO95785 1651 aa11.38□□□□□ -0.59
CASC18-202ENST00000548557 NCAPD3P42695 1498 aa11.37□□□□□ -0.59
CASC18-202ENST00000548557 PLPPR3Q6T4P5 718 aa11.36□□□□□ -0.59
CASC18-202ENST00000548557 HMGXB3Q12766 1538 aa11.33□□□□□ -0.6
CASC18-202ENST00000548557 BAZ1BQ9UIG0 1483 aaKnown RBP11.32□□□□□ -0.6
CASC18-202ENST00000548557 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
CASC18-202ENST00000548557 DNAJC5BQ9UF47 199 aa11.28□□□□□ -0.6
CASC18-202ENST00000548557 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
CASC18-202ENST00000548557 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
CASC18-202ENST00000548557 MYT1Q01538 1121 aa11.08□□□□□ -0.64
CASC18-202ENST00000548557 CADPSQ9ULU8 1353 aa11.05□□□□□ -0.64
CASC18-202ENST00000548557 CFTRP13569 1480 aa11.05□□□□□ -0.64
CASC18-202ENST00000548557 FOXD1Q16676 465 aa11.04□□□□□ -0.64
CASC18-202ENST00000548557 LAMC3Q9Y6N6 1575 aa11.01□□□□□ -0.65
CASC18-202ENST00000548557 TTBK1Q5TCY1 1321 aaPredicted RBP11□□□□□ -0.65
CASC18-202ENST00000548557 EHMT2Q96KQ7 1210 aa10.97□□□□□ -0.65
CASC18-202ENST00000548557 NESP48681 1621 aa10.95□□□□□ -0.66
CASC18-202ENST00000548557 PDS5BQ9NTI5 1447 aa10.95□□□□□ -0.66
CASC18-202ENST00000548557 PRDM2Q13029 1718 aa10.93□□□□□ -0.66
CASC18-202ENST00000548557 FANCD2Q9BXW9 1451 aa10.91□□□□□ -0.66
CASC18-202ENST00000548557 PELP1Q8IZL8 1130 aaKnown RBP10.88□□□□□ -0.67
CASC18-202ENST00000548557 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
CASC18-202ENST00000548557 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
CASC18-202ENST00000548557 ERCC6Q03468 1493 aa10.83□□□□□ -0.68
CASC18-202ENST00000548557 PRKCSHP14314 528 aaPredicted RBP10.82□□□□□ -0.68
CASC18-202ENST00000548557 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
CASC18-202ENST00000548557 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
CASC18-202ENST00000548557 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
CASC18-202ENST00000548557 APLP2Q06481 763 aa10.79□□□□□ -0.68
CASC18-202ENST00000548557 MRC2Q9UBG0 1479 aa10.79□□□□□ -0.68
CASC18-202ENST00000548557 CUX1P39880 1505 aa10.77□□□□□ -0.68
CASC18-202ENST00000548557 TOP2BQ02880 1626 aa10.77□□□□□ -0.68
CASC18-202ENST00000548557 DNMBPQ6XZF7 1577 aa10.77□□□□□ -0.69
CASC18-202ENST00000548557 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
CASC18-202ENST00000548557 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
CASC18-202ENST00000548557 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
CASC18-202ENST00000548557 BIVM-ERCC5R4GMW8 1640 aa10.76□□□□□ -0.69
CASC18-202ENST00000548557 ERICH6Q7L0X2 663 aa10.75□□□□□ -0.69
CASC18-202ENST00000548557 NCBP3Q53F19 620 aaKnown RBP10.74□□□□□ -0.69
CASC18-202ENST00000548557 WDR62O43379 1518 aa10.74□□□□□ -0.69
CASC18-202ENST00000548557 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
CASC18-202ENST00000548557 THOC2Q8NI27 1593 aaKnown RBP10.73□□□□□ -0.69
CASC18-202ENST00000548557 FGD5Q6ZNL6 1462 aa10.7□□□□□ -0.7
CASC18-202ENST00000548557 POLA1P09884 1462 aaPredicted RBP10.69□□□□□ -0.7
CASC18-202ENST00000548557 PPP6R1Q9UPN7 881 aa10.68□□□□□ -0.7
CASC18-202ENST00000548557 ADRA2BP18089 450 aa10.67□□□□□ -0.7
CASC18-202ENST00000548557 SOGA1O94964 1423 aa10.67□□□□□ -0.7
CASC18-202ENST00000548557 CUX2O14529 1486 aa10.64□□□□□ -0.71
CASC18-202ENST00000548557 IFT140Q96RY7 1462 aa10.64□□□□□ -0.71
CASC18-202ENST00000548557 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
CASC18-202ENST00000548557 RAD54L2Q9Y4B4 1467 aa10.62□□□□□ -0.71
CASC18-202ENST00000548557 EEA1Q15075 1411 aa10.62□□□□□ -0.71
CASC18-202ENST00000548557 TARBP1Q13395 1621 aaKnown RBP10.61□□□□□ -0.71
CASC18-202ENST00000548557 KIF27Q86VH2 1401 aa10.6□□□□□ -0.71
CASC18-202ENST00000548557 WDR97A6NE52 1622 aa10.57□□□□□ -0.72
CASC18-202ENST00000548557 TDRD9Q8NDG6 1382 aaKnown RBP10.56□□□□□ -0.72
CASC18-202ENST00000548557 RUSC2Q8N2Y8 1516 aa10.55□□□□□ -0.72
CASC18-202ENST00000548557 CSRNP3Q8WYN3 585 aa10.55□□□□□ -0.72
CASC18-202ENST00000548557 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
CASC18-202ENST00000548557 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
CASC18-202ENST00000548557 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
CASC18-202ENST00000548557 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
CASC18-202ENST00000548557 AQRO60306 1485 aaKnown RBP eCLIP10.52□□□□□ -0.72
CASC18-202ENST00000548557 IGF1RP08069 1367 aa10.52□□□□□ -0.73
CASC18-202ENST00000548557 ERICH3Q5RHP9 1530 aa10.51□□□□□ -0.73
CASC18-202ENST00000548557 GRIN2BQ13224 1484 aa10.51□□□□□ -0.73
CASC18-202ENST00000548557 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
CASC18-202ENST00000548557 PRXQ9BXM0 1461 aa10.47□□□□□ -0.73
CASC18-202ENST00000548557 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.73
CASC18-202ENST00000548557 CUL7Q14999 1698 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms