RNA–Protein interactions for RNA: ENST00000408900.7

RAP1GDS1-204, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

TSL 1 (best) BASIC

Gene RAP1GDS1, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-204ENST00000408900 AEBP2Q6ZN18 517 aaPredicted RBP17.33■□□□□ 0.37
RAP1GDS1-204ENST00000408900 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
RAP1GDS1-204ENST00000408900 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
RAP1GDS1-204ENST00000408900 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
RAP1GDS1-204ENST00000408900 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
RAP1GDS1-204ENST00000408900 FOXD1Q16676 465 aa13.72□□□□□ -0.21
RAP1GDS1-204ENST00000408900 PLPPR3Q6T4P5 718 aa13.66□□□□□ -0.22
RAP1GDS1-204ENST00000408900 ADRA2BP18089 450 aa13.05□□□□□ -0.32
RAP1GDS1-204ENST00000408900 PPP6R1Q9UPN7 881 aa13.05□□□□□ -0.32
RAP1GDS1-204ENST00000408900 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
RAP1GDS1-204ENST00000408900 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
RAP1GDS1-204ENST00000408900 MSH5O43196 834 aa12.78□□□□□ -0.36
RAP1GDS1-204ENST00000408900 ZCCHC6Q5VYS8 1495 aaKnown RBP12.48□□□□□ -0.41
RAP1GDS1-204ENST00000408900 DCAF8L2P0C7V8 631 aa12.39□□□□□ -0.43
RAP1GDS1-204ENST00000408900 ABCC9O60706 1549 aa12.33□□□□□ -0.44
RAP1GDS1-204ENST00000408900 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
RAP1GDS1-204ENST00000408900 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
RAP1GDS1-204ENST00000408900 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.48
RAP1GDS1-204ENST00000408900 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
RAP1GDS1-204ENST00000408900 NACADO15069 1562 aa12.05□□□□□ -0.48
RAP1GDS1-204ENST00000408900 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
RAP1GDS1-204ENST00000408900 SCRIBQ14160 1630 aa11.97□□□□□ -0.49
RAP1GDS1-204ENST00000408900 RB1CC1Q8TDY2 1594 aa11.96□□□□□ -0.5
RAP1GDS1-204ENST00000408900 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
RAP1GDS1-204ENST00000408900 POTEDQ86YR6 584 aa11.83□□□□□ -0.52
RAP1GDS1-204ENST00000408900 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
RAP1GDS1-204ENST00000408900 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
RAP1GDS1-204ENST00000408900 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
RAP1GDS1-204ENST00000408900 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
RAP1GDS1-204ENST00000408900 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
RAP1GDS1-204ENST00000408900 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAP1GDS1-204ENST00000408900 BICRAQ9NZM4 1560 aa11.65□□□□□ -0.55
RAP1GDS1-204ENST00000408900 CECR2Q9BXF3 1484 aa11.62□□□□□ -0.55
RAP1GDS1-204ENST00000408900 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
RAP1GDS1-204ENST00000408900 MROH2BQ7Z745 1585 aa11.53□□□□□ -0.56
RAP1GDS1-204ENST00000408900 KCNA4P22459 653 aa11.51□□□□□ -0.57
RAP1GDS1-204ENST00000408900 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
RAP1GDS1-204ENST00000408900 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
RAP1GDS1-204ENST00000408900 BAZ1AQ9NRL2 1556 aaPredicted RBP11.46□□□□□ -0.57
RAP1GDS1-204ENST00000408900 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
RAP1GDS1-204ENST00000408900 WIZO95785 1651 aa11.44□□□□□ -0.58
RAP1GDS1-204ENST00000408900 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
RAP1GDS1-204ENST00000408900 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
RAP1GDS1-204ENST00000408900 EIF4G1Q04637 1599 aaKnown RBP11.27□□□□□ -0.61
RAP1GDS1-204ENST00000408900 TOP2AP11388 1531 aaKnown RBP11.27□□□□□ -0.61
RAP1GDS1-204ENST00000408900 ATAD2BQ9ULI0 1458 aa11.26□□□□□ -0.61
RAP1GDS1-204ENST00000408900 PEG3Q9GZU2 1588 aa11.25□□□□□ -0.61
RAP1GDS1-204ENST00000408900 SMARCA2P51531 1590 aa11.21□□□□□ -0.61
RAP1GDS1-204ENST00000408900 CCDC88BA6NC98 1476 aa11.2□□□□□ -0.62
RAP1GDS1-204ENST00000408900 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
RAP1GDS1-204ENST00000408900 DNAJC5BQ9UF47 199 aa11.15□□□□□ -0.62
RAP1GDS1-204ENST00000408900 NCAPD3P42695 1498 aa11.14□□□□□ -0.63
RAP1GDS1-204ENST00000408900 CC2D2AQ9P2K1 1620 aa11.12□□□□□ -0.63
RAP1GDS1-204ENST00000408900 HMGXB3Q12766 1538 aa11.1□□□□□ -0.63
RAP1GDS1-204ENST00000408900 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
RAP1GDS1-204ENST00000408900 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
RAP1GDS1-204ENST00000408900 ABCC8Q09428 1581 aa10.98□□□□□ -0.65
RAP1GDS1-204ENST00000408900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.65
RAP1GDS1-204ENST00000408900 CFTRP13569 1480 aa10.9□□□□□ -0.67
RAP1GDS1-204ENST00000408900 RNF39Q9H2S5 420 aa10.89□□□□□ -0.67
RAP1GDS1-204ENST00000408900 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
RAP1GDS1-204ENST00000408900 CADPSQ9ULU8 1353 aa10.87□□□□□ -0.67
RAP1GDS1-204ENST00000408900 WRNQ14191 1432 aaPredicted RBP eCLIP10.87□□□□□ -0.67
RAP1GDS1-204ENST00000408900 LOC105371045A0A1W2PR82 267 aa10.86□□□□□ -0.67
RAP1GDS1-204ENST00000408900 SYNJ1O43426 1573 aa10.84□□□□□ -0.67
RAP1GDS1-204ENST00000408900 NESP48681 1621 aa10.84□□□□□ -0.67
RAP1GDS1-204ENST00000408900 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
RAP1GDS1-204ENST00000408900 PRDM2Q13029 1718 aa10.81□□□□□ -0.68
RAP1GDS1-204ENST00000408900 C1QBPQ07021 282 aaKnown RBP10.79□□□□□ -0.68
RAP1GDS1-204ENST00000408900 SOGA1O94964 1423 aa10.78□□□□□ -0.68
RAP1GDS1-204ENST00000408900 EHMT2Q96KQ7 1210 aa10.78□□□□□ -0.68
RAP1GDS1-204ENST00000408900 CUX1P39880 1505 aa10.77□□□□□ -0.69
RAP1GDS1-204ENST00000408900 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
RAP1GDS1-204ENST00000408900 RUSC2Q8N2Y8 1516 aa10.76□□□□□ -0.69
RAP1GDS1-204ENST00000408900 FANCD2Q9BXW9 1451 aa10.76□□□□□ -0.69
RAP1GDS1-204ENST00000408900 BIVM-ERCC5R4GMW8 1640 aa10.75□□□□□ -0.69
RAP1GDS1-204ENST00000408900 LAMC3Q9Y6N6 1575 aa10.75□□□□□ -0.69
RAP1GDS1-204ENST00000408900 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
RAP1GDS1-204ENST00000408900 U3KPZ7 1027 aaPredicted RBP10.74□□□□□ -0.69
RAP1GDS1-204ENST00000408900 FOXD4L1Q9NU39 408 aa10.68□□□□□ -0.7
RAP1GDS1-204ENST00000408900 PDS5BQ9NTI5 1447 aa10.68□□□□□ -0.7
RAP1GDS1-204ENST00000408900 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
RAP1GDS1-204ENST00000408900 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
RAP1GDS1-204ENST00000408900 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
RAP1GDS1-204ENST00000408900 EEA1Q15075 1411 aa10.66□□□□□ -0.7
RAP1GDS1-204ENST00000408900 FGD5Q6ZNL6 1462 aa10.65□□□□□ -0.7
RAP1GDS1-204ENST00000408900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.64□□□□□ -0.71
RAP1GDS1-204ENST00000408900 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
RAP1GDS1-204ENST00000408900 URB2Q14146 1524 aaKnown RBP10.64□□□□□ -0.71
RAP1GDS1-204ENST00000408900 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
RAP1GDS1-204ENST00000408900 DNMBPQ6XZF7 1577 aa10.64□□□□□ -0.71
RAP1GDS1-204ENST00000408900 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
RAP1GDS1-204ENST00000408900 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
RAP1GDS1-204ENST00000408900 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
RAP1GDS1-204ENST00000408900 APLP2Q06481 763 aa10.59□□□□□ -0.71
RAP1GDS1-204ENST00000408900 CUX2O14529 1486 aa10.59□□□□□ -0.71
RAP1GDS1-204ENST00000408900 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
RAP1GDS1-204ENST00000408900 SAMD1Q6SPF0 538 aaPredicted RBP10.57□□□□□ -0.72
RAP1GDS1-204ENST00000408900 ZBTB22O15209 634 aa10.56□□□□□ -0.72
RAP1GDS1-204ENST00000408900 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms