RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 NISCHQ9Y2I1 1504 aa15.8■□□□□ 0.12
CX3CR1-202ENST00000399220 CCDC180Q9P1Z9 1646 aa13.95□□□□□ -0.18
CX3CR1-202ENST00000399220 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
CX3CR1-202ENST00000399220 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
CX3CR1-202ENST00000399220 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
CX3CR1-202ENST00000399220 NACADO15069 1562 aa12.88□□□□□ -0.35
CX3CR1-202ENST00000399220 ABCC9O60706 1549 aa12.71□□□□□ -0.37
CX3CR1-202ENST00000399220 RB1CC1Q8TDY2 1594 aa12.7□□□□□ -0.38
CX3CR1-202ENST00000399220 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.4
CX3CR1-202ENST00000399220 SCRIBQ14160 1630 aa12.52□□□□□ -0.41
CX3CR1-202ENST00000399220 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.41
CX3CR1-202ENST00000399220 DCAF8L2P0C7V8 631 aa12.46□□□□□ -0.42
CX3CR1-202ENST00000399220 BICRAQ9NZM4 1560 aa12.34□□□□□ -0.43
CX3CR1-202ENST00000399220 BAZ1AQ9NRL2 1556 aaPredicted RBP12.21□□□□□ -0.45
CX3CR1-202ENST00000399220 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
CX3CR1-202ENST00000399220 SMARCA4P51532 1647 aa12.16□□□□□ -0.46
CX3CR1-202ENST00000399220 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
CX3CR1-202ENST00000399220 CECR2Q9BXF3 1484 aa12.13□□□□□ -0.47
CX3CR1-202ENST00000399220 MROH2BQ7Z745 1585 aa12.12□□□□□ -0.47
CX3CR1-202ENST00000399220 WIZO95785 1651 aa12.04□□□□□ -0.48
CX3CR1-202ENST00000399220 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
CX3CR1-202ENST00000399220 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
CX3CR1-202ENST00000399220 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
CX3CR1-202ENST00000399220 EIF4G1Q04637 1599 aaKnown RBP11.93□□□□□ -0.5
CX3CR1-202ENST00000399220 HMGXB3Q12766 1538 aa11.89□□□□□ -0.51
CX3CR1-202ENST00000399220 ATAD2BQ9ULI0 1458 aa11.88□□□□□ -0.51
CX3CR1-202ENST00000399220 PABPN1Q86U42 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
CX3CR1-202ENST00000399220 NCAPD3P42695 1498 aa11.84□□□□□ -0.51
CX3CR1-202ENST00000399220 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
CX3CR1-202ENST00000399220 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
CX3CR1-202ENST00000399220 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
CX3CR1-202ENST00000399220 PRDM2Q13029 1718 aa11.71□□□□□ -0.53
CX3CR1-202ENST00000399220 CC2D2AQ9P2K1 1620 aa11.68□□□□□ -0.54
CX3CR1-202ENST00000399220 CFTRP13569 1480 aa11.56□□□□□ -0.56
CX3CR1-202ENST00000399220 BIVM-ERCC5R4GMW8 1640 aa11.54□□□□□ -0.56
CX3CR1-202ENST00000399220 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
CX3CR1-202ENST00000399220 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
CX3CR1-202ENST00000399220 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.58
CX3CR1-202ENST00000399220 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
CX3CR1-202ENST00000399220 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
CX3CR1-202ENST00000399220 EEA1Q15075 1411 aa11.43□□□□□ -0.58
CX3CR1-202ENST00000399220 CADPSQ9ULU8 1353 aa11.43□□□□□ -0.58
CX3CR1-202ENST00000399220 TRIM41Q8WV44 630 aa11.4□□□□□ -0.58
CX3CR1-202ENST00000399220 CUX1P39880 1505 aa11.36□□□□□ -0.59
CX3CR1-202ENST00000399220 KIF21BO75037 1637 aa11.32□□□□□ -0.6
CX3CR1-202ENST00000399220 DNMBPQ6XZF7 1577 aa11.31□□□□□ -0.6
CX3CR1-202ENST00000399220 FANCD2Q9BXW9 1451 aa11.29□□□□□ -0.6
CX3CR1-202ENST00000399220 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
CX3CR1-202ENST00000399220 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
CX3CR1-202ENST00000399220 SOGA1O94964 1423 aa11.24□□□□□ -0.61
CX3CR1-202ENST00000399220 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
CX3CR1-202ENST00000399220 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
CX3CR1-202ENST00000399220 CEP164Q9UPV0 1460 aa11.23□□□□□ -0.61
CX3CR1-202ENST00000399220 NESP48681 1621 aa11.22□□□□□ -0.61
CX3CR1-202ENST00000399220 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
CX3CR1-202ENST00000399220 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
CX3CR1-202ENST00000399220 ABCA10Q8WWZ4 1543 aa11.19□□□□□ -0.62
CX3CR1-202ENST00000399220 URB2Q14146 1524 aaKnown RBP11.18□□□□□ -0.62
CX3CR1-202ENST00000399220 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
CX3CR1-202ENST00000399220 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
CX3CR1-202ENST00000399220 GOLGA3Q08378 1498 aa11.18□□□□□ -0.62
CX3CR1-202ENST00000399220 TNIKQ9UKE5 1360 aa11.16□□□□□ -0.62
CX3CR1-202ENST00000399220 WDR62O43379 1518 aa11.15□□□□□ -0.62
CX3CR1-202ENST00000399220 KIF27Q86VH2 1401 aa11.15□□□□□ -0.62
CX3CR1-202ENST00000399220 ABCA5Q8WWZ7 1642 aa11.15□□□□□ -0.62
CX3CR1-202ENST00000399220 POLA1P09884 1462 aaPredicted RBP11.14□□□□□ -0.63
CX3CR1-202ENST00000399220 TARBP1Q13395 1621 aaKnown RBP11.14□□□□□ -0.63
CX3CR1-202ENST00000399220 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
CX3CR1-202ENST00000399220 CUL7Q14999 1698 aa11.13□□□□□ -0.63
CX3CR1-202ENST00000399220 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
CX3CR1-202ENST00000399220 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
CX3CR1-202ENST00000399220 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
CX3CR1-202ENST00000399220 LOC105371045A0A1W2PR82 267 aa11.1□□□□□ -0.63
CX3CR1-202ENST00000399220 CUX2O14529 1486 aa11.05□□□□□ -0.64
CX3CR1-202ENST00000399220 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
CX3CR1-202ENST00000399220 IGF1RP08069 1367 aa11.04□□□□□ -0.64
CX3CR1-202ENST00000399220 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
CX3CR1-202ENST00000399220 CEP162Q5TB80 1403 aa11.02□□□□□ -0.64
CX3CR1-202ENST00000399220 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
CX3CR1-202ENST00000399220 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
CX3CR1-202ENST00000399220 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
CX3CR1-202ENST00000399220 FAM9AQ8IZU1 332 aaPredicted RBP10.99□□□□□ -0.65
CX3CR1-202ENST00000399220 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.65
CX3CR1-202ENST00000399220 ADAMTS12P58397 1594 aa10.96□□□□□ -0.66
CX3CR1-202ENST00000399220 CARMIL1Q5VZK9 1371 aa10.95□□□□□ -0.66
CX3CR1-202ENST00000399220 EFCAB5A4FU69 1503 aa10.93□□□□□ -0.66
CX3CR1-202ENST00000399220 EIF4G3O43432 1585 aaKnown RBP10.92□□□□□ -0.66
CX3CR1-202ENST00000399220 CLIP1P30622 1438 aa10.92□□□□□ -0.66
CX3CR1-202ENST00000399220 GRIN2BQ13224 1484 aa10.91□□□□□ -0.66
CX3CR1-202ENST00000399220 SAMD9Q5K651 1589 aa10.9□□□□□ -0.66
CX3CR1-202ENST00000399220 VPS8Q8N3P4 1428 aa10.9□□□□□ -0.66
CX3CR1-202ENST00000399220 ARAP1Q96P48 1450 aa10.9□□□□□ -0.66
CX3CR1-202ENST00000399220 ERCC6Q03468 1493 aa10.89□□□□□ -0.67
CX3CR1-202ENST00000399220 MAP3K1Q13233 1512 aa10.89□□□□□ -0.67
CX3CR1-202ENST00000399220 FHAD1B1AJZ9 1412 aa10.89□□□□□ -0.67
CX3CR1-202ENST00000399220 MAGI1Q96QZ7 1491 aaPredicted RBP10.87□□□□□ -0.67
CX3CR1-202ENST00000399220 ARHGAP35Q9NRY4 1499 aa10.87□□□□□ -0.67
CX3CR1-202ENST00000399220 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.67
CX3CR1-202ENST00000399220 UBTFP17480 764 aaKnown RBP10.83□□□□□ -0.68
CX3CR1-202ENST00000399220 ZNF608Q9ULD9 1512 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms