RNA–Protein interactions for RNA: ENST00000545746.5

C12orf4-209, Transcript of chromosome 12 open reading frame 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf4, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-209ENST00000545746 NISCHQ9Y2I1 1504 aa15.36■□□□□ 0.05
C12orf4-209ENST00000545746 AEBP2Q6ZN18 517 aaPredicted RBP14.48□□□□□ -0.09
C12orf4-209ENST00000545746 CHIC1Q5VXU3 224 aa14.42□□□□□ -0.1
C12orf4-209ENST00000545746 CCDC180Q9P1Z9 1646 aa13.91□□□□□ -0.18
C12orf4-209ENST00000545746 ABCC9O60706 1549 aa13.66□□□□□ -0.22
C12orf4-209ENST00000545746 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
C12orf4-209ENST00000545746 NACADO15069 1562 aa13.15□□□□□ -0.31
C12orf4-209ENST00000545746 MYO15BQ96JP2 1530 aa13.07□□□□□ -0.32
C12orf4-209ENST00000545746 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
C12orf4-209ENST00000545746 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
C12orf4-209ENST00000545746 SHROOM4Q9ULL8 1493 aa12.82□□□□□ -0.36
C12orf4-209ENST00000545746 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
C12orf4-209ENST00000545746 UNC13AQ9UPW8 1703 aa12.78□□□□□ -0.36
C12orf4-209ENST00000545746 BICRAQ9NZM4 1560 aa12.74□□□□□ -0.37
C12orf4-209ENST00000545746 ZCCHC6Q5VYS8 1495 aaKnown RBP12.73□□□□□ -0.37
C12orf4-209ENST00000545746 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
C12orf4-209ENST00000545746 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
C12orf4-209ENST00000545746 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
C12orf4-209ENST00000545746 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
C12orf4-209ENST00000545746 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
C12orf4-209ENST00000545746 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
C12orf4-209ENST00000545746 POTEDQ86YR6 584 aa12.3□□□□□ -0.44
C12orf4-209ENST00000545746 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
C12orf4-209ENST00000545746 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
C12orf4-209ENST00000545746 SMARCA2P51531 1590 aa12.03□□□□□ -0.48
C12orf4-209ENST00000545746 CUX2O14529 1486 aa12.01□□□□□ -0.49
C12orf4-209ENST00000545746 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
C12orf4-209ENST00000545746 SENP3Q9H4L4 574 aaPredicted RBP11.99□□□□□ -0.49
C12orf4-209ENST00000545746 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
C12orf4-209ENST00000545746 PEG3Q9GZU2 1588 aa11.97□□□□□ -0.49
C12orf4-209ENST00000545746 BAZ1AQ9NRL2 1556 aaPredicted RBP11.95□□□□□ -0.5
C12orf4-209ENST00000545746 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
C12orf4-209ENST00000545746 ERCC6Q03468 1493 aa11.86□□□□□ -0.51
C12orf4-209ENST00000545746 BAZ1BQ9UIG0 1483 aaKnown RBP11.86□□□□□ -0.51
C12orf4-209ENST00000545746 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
C12orf4-209ENST00000545746 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
C12orf4-209ENST00000545746 MROH2BQ7Z745 1585 aa11.75□□□□□ -0.53
C12orf4-209ENST00000545746 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
C12orf4-209ENST00000545746 PDS5BQ9NTI5 1447 aa11.74□□□□□ -0.53
C12orf4-209ENST00000545746 NESP48681 1621 aa11.71□□□□□ -0.53
C12orf4-209ENST00000545746 CADPSQ9ULU8 1353 aa11.68□□□□□ -0.54
C12orf4-209ENST00000545746 KIF21AQ7Z4S6 1674 aa11.63□□□□□ -0.55
C12orf4-209ENST00000545746 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
C12orf4-209ENST00000545746 WDR62O43379 1518 aa11.62□□□□□ -0.55
C12orf4-209ENST00000545746 WIZO95785 1651 aa11.57□□□□□ -0.56
C12orf4-209ENST00000545746 CFTRP13569 1480 aa11.56□□□□□ -0.56
C12orf4-209ENST00000545746 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
C12orf4-209ENST00000545746 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
C12orf4-209ENST00000545746 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.56
C12orf4-209ENST00000545746 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
C12orf4-209ENST00000545746 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
C12orf4-209ENST00000545746 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
C12orf4-209ENST00000545746 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.59
C12orf4-209ENST00000545746 IFT140Q96RY7 1462 aa11.37□□□□□ -0.59
C12orf4-209ENST00000545746 ADRA2BP18089 450 aa11.36□□□□□ -0.59
C12orf4-209ENST00000545746 CCDC88BA6NC98 1476 aa11.35□□□□□ -0.59
C12orf4-209ENST00000545746 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
C12orf4-209ENST00000545746 DNMBPQ6XZF7 1577 aa11.3□□□□□ -0.6
C12orf4-209ENST00000545746 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
C12orf4-209ENST00000545746 WDR97A6NE52 1622 aa11.3□□□□□ -0.6
C12orf4-209ENST00000545746 PPP6R1Q9UPN7 881 aa11.25□□□□□ -0.61
C12orf4-209ENST00000545746 FOXD1Q16676 465 aa11.22□□□□□ -0.61
C12orf4-209ENST00000545746 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
C12orf4-209ENST00000545746 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
C12orf4-209ENST00000545746 ZNF608Q9ULD9 1512 aaPredicted RBP11.19□□□□□ -0.62
C12orf4-209ENST00000545746 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
C12orf4-209ENST00000545746 RIMBP3CA6NJZ7 1639 aa11.18□□□□□ -0.62
C12orf4-209ENST00000545746 RIMBP3BA6NNM3 1639 aa11.18□□□□□ -0.62
C12orf4-209ENST00000545746 RIMBP3Q9UFD9 1639 aa11.18□□□□□ -0.62
C12orf4-209ENST00000545746 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
C12orf4-209ENST00000545746 ARHGEF11O15085 1522 aa11.15□□□□□ -0.63
C12orf4-209ENST00000545746 SOGA1O94964 1423 aa11.11□□□□□ -0.63
C12orf4-209ENST00000545746 MAGI1Q96QZ7 1491 aaPredicted RBP11.11□□□□□ -0.63
C12orf4-209ENST00000545746 CHD1O14646 1710 aa11.11□□□□□ -0.63
C12orf4-209ENST00000545746 AQRO60306 1485 aaKnown RBP eCLIP11.09□□□□□ -0.63
C12orf4-209ENST00000545746 GRIN2BQ13224 1484 aa11.08□□□□□ -0.64
C12orf4-209ENST00000545746 FGD5Q6ZNL6 1462 aa11.07□□□□□ -0.64
C12orf4-209ENST00000545746 CLASP1Q7Z460 1538 aa11.07□□□□□ -0.64
C12orf4-209ENST00000545746 SYNJ1O43426 1573 aa11.07□□□□□ -0.64
C12orf4-209ENST00000545746 CUX1P39880 1505 aa11.06□□□□□ -0.64
C12orf4-209ENST00000545746 SYNJ2O15056 1496 aa11.04□□□□□ -0.64
C12orf4-209ENST00000545746 RAD54L2Q9Y4B4 1467 aa11.04□□□□□ -0.64
C12orf4-209ENST00000545746 ABCA10Q8WWZ4 1543 aa11.03□□□□□ -0.64
C12orf4-209ENST00000545746 SNAPC4Q5SXM2 1469 aa11.03□□□□□ -0.64
C12orf4-209ENST00000545746 ARAP1Q96P48 1450 aa11.02□□□□□ -0.65
C12orf4-209ENST00000545746 TDRD9Q8NDG6 1382 aaKnown RBP11□□□□□ -0.65
C12orf4-209ENST00000545746 ABCA5Q8WWZ7 1642 aa11□□□□□ -0.65
C12orf4-209ENST00000545746 GAPVD1Q14C86 1478 aa10.99□□□□□ -0.65
C12orf4-209ENST00000545746 PBRM1Q86U86 1689 aa10.99□□□□□ -0.65
C12orf4-209ENST00000545746 KCNA4P22459 653 aa10.99□□□□□ -0.65
C12orf4-209ENST00000545746 CHMP7Q8WUX9 453 aaPredicted RBP10.97□□□□□ -0.65
C12orf4-209ENST00000545746 BIVM-ERCC5R4GMW8 1640 aa10.97□□□□□ -0.65
C12orf4-209ENST00000545746 CYB5RLQ6IPT4 315 aa10.95□□□□□ -0.66
C12orf4-209ENST00000545746 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
C12orf4-209ENST00000545746 FBLN2P98095 1184 aa10.94□□□□□ -0.66
C12orf4-209ENST00000545746 TOP2BQ02880 1626 aa10.94□□□□□ -0.66
C12orf4-209ENST00000545746 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
C12orf4-209ENST00000545746 NUP160Q12769 1436 aa10.91□□□□□ -0.66
C12orf4-209ENST00000545746 ADAMTS12P58397 1594 aa10.91□□□□□ -0.66
C12orf4-209ENST00000545746 GRIN2AQ12879 1464 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms