Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRAFP15056 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BRAFP15056 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
BRAFP15056 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRAFP15056 ID1-201ENST00000376105 1233 ntBASIC20.45■□□□□ 0.86
BRAFP15056 AC006970.2-201ENST00000450065 779 ntBASIC20.45■□□□□ 0.86
BRAFP15056 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.45■□□□□ 0.86
BRAFP15056 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRAFP15056 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
BRAFP15056 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRAFP15056 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRAFP15056 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
BRAFP15056 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRAFP15056 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRAFP15056 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
BRAFP15056 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.44■□□□□ 0.86
BRAFP15056 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
BRAFP15056 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.44■□□□□ 0.86
BRAFP15056 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.44■□□□□ 0.86
BRAFP15056 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.44■□□□□ 0.86
BRAFP15056 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.44■□□□□ 0.86
BRAFP15056 AC005181.1-201ENST00000604782 1256 ntBASIC20.44■□□□□ 0.86
BRAFP15056 AC013268.1-206ENST00000638368 961 ntBASIC20.44■□□□□ 0.86
BRAFP15056 AC112229.1-201ENST00000639295 961 ntBASIC20.44■□□□□ 0.86
BRAFP15056 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.44■□□□□ 0.86
BRAFP15056 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.44■□□□□ 0.86
BRAFP15056 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.44■□□□□ 0.86
BRAFP15056 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 TNXA-203ENST00000507684 2038 ntBASIC20.44■□□□□ 0.86
BRAFP15056 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
BRAFP15056 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRAFP15056 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.44■□□□□ 0.86
BRAFP15056 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
BRAFP15056 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
BRAFP15056 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
BRAFP15056 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 HLA-L-209ENST00000420110 1011 ntBASIC20.43■□□□□ 0.86
BRAFP15056 NCF1B-203ENST00000435988 1254 ntBASIC20.43■□□□□ 0.86
BRAFP15056 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.43■□□□□ 0.86
BRAFP15056 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.43■□□□□ 0.86
BRAFP15056 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.43■□□□□ 0.86
BRAFP15056 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.43■□□□□ 0.86
BRAFP15056 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
BRAFP15056 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRAFP15056 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
BRAFP15056 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
BRAFP15056 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.42■□□□□ 0.86
BRAFP15056 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BRAFP15056 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.42■□□□□ 0.86
BRAFP15056 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.42■□□□□ 0.86
BRAFP15056 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.42■□□□□ 0.86
BRAFP15056 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.42■□□□□ 0.86
BRAFP15056 AC004408.2-201ENST00000623613 2777 ntBASIC20.42■□□□□ 0.86
BRAFP15056 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
BRAFP15056 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BRAFP15056 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
BRAFP15056 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BRAFP15056 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BRAFP15056 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
BRAFP15056 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BRAFP15056 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BRAFP15056 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.41■□□□□ 0.86
BRAFP15056 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.41■□□□□ 0.86
BRAFP15056 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRAFP15056 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRAFP15056 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.41■□□□□ 0.86
BRAFP15056 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
BRAFP15056 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRAFP15056 AC007322.4-201ENST00000509611 723 ntBASIC20.41■□□□□ 0.86
BRAFP15056 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRAFP15056 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
BRAFP15056 AC243732.1-201ENST00000612648 864 ntBASIC20.41■□□□□ 0.86
BRAFP15056 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
BRAFP15056 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRAFP15056 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.41■□□□□ 0.86
BRAFP15056 AC068338.2-201ENST00000563278 1430 ntBASIC20.41■□□□□ 0.86
BRAFP15056 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRAFP15056 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.41■□□□□ 0.86
BRAFP15056 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.41■□□□□ 0.86
BRAFP15056 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRAFP15056 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms