Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPXO76031 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.06■□□□□ 0.48
CLPXO76031 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPXO76031 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPXO76031 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CLPXO76031 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPXO76031 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLPXO76031 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLPXO76031 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLPXO76031 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CLPXO76031 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CLPXO76031 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLPXO76031 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CLPXO76031 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.05■□□□□ 0.48
CLPXO76031 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.05■□□□□ 0.48
CLPXO76031 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.05■□□□□ 0.48
CLPXO76031 MIR5787-201ENST00000611784 55 ntBASIC18.05■□□□□ 0.48
CLPXO76031 AC092666.2-201ENST00000613287 246 ntBASIC18.05■□□□□ 0.48
CLPXO76031 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.05■□□□□ 0.48
CLPXO76031 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLPXO76031 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLPXO76031 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLPXO76031 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPXO76031 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.05■□□□□ 0.48
CLPXO76031 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 AL133373.2-201ENST00000623187 2828 ntBASIC18.04■□□□□ 0.48
CLPXO76031 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.04■□□□□ 0.48
CLPXO76031 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.04■□□□□ 0.48
CLPXO76031 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.04■□□□□ 0.48
CLPXO76031 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CLPXO76031 MIR939-201ENST00000401314 82 ntBASIC18.04■□□□□ 0.48
CLPXO76031 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLPXO76031 AC105265.2-201ENST00000467189 838 ntBASIC18.04■□□□□ 0.48
CLPXO76031 MIR4767-201ENST00000582827 78 ntBASIC18.04■□□□□ 0.48
CLPXO76031 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.04■□□□□ 0.48
CLPXO76031 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CLPXO76031 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.04■□□□□ 0.48
CLPXO76031 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPXO76031 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.03■□□□□ 0.48
CLPXO76031 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CLPXO76031 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLPXO76031 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.03■□□□□ 0.48
CLPXO76031 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.03■□□□□ 0.48
CLPXO76031 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLPXO76031 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.03■□□□□ 0.48
CLPXO76031 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.03■□□□□ 0.48
CLPXO76031 AF213884.3-201ENST00000563833 479 ntBASIC18.03■□□□□ 0.48
CLPXO76031 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.03■□□□□ 0.48
CLPXO76031 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLPXO76031 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLPXO76031 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.03■□□□□ 0.48
CLPXO76031 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLPXO76031 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.03■□□□□ 0.48
CLPXO76031 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLPXO76031 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.02■□□□□ 0.48
CLPXO76031 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLPXO76031 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLPXO76031 AC135050.7-201ENST00000624508 2218 ntBASIC18.02■□□□□ 0.48
CLPXO76031 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.02■□□□□ 0.48
CLPXO76031 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLPXO76031 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.02■□□□□ 0.48
CLPXO76031 AC087239.1-201ENST00000622671 572 ntBASIC18.02■□□□□ 0.48
CLPXO76031 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.02■□□□□ 0.48
CLPXO76031 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLPXO76031 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLPXO76031 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.02■□□□□ 0.47
CLPXO76031 AC011484.1-201ENST00000377652 1995 ntBASIC18.02■□□□□ 0.47
CLPXO76031 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms