Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.42■■□□□ 1.82
PCDHB9Q9Y5E1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB9Q9Y5E1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDHB9Q9Y5E1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB9Q9Y5E1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB9Q9Y5E1 MIR3648-2-201ENST00000581792 180 ntBASIC26.41■■□□□ 1.82
PCDHB9Q9Y5E1 MIR3648-1-201ENST00000615959 180 ntBASIC26.41■■□□□ 1.82
PCDHB9Q9Y5E1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
PCDHB9Q9Y5E1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDHB9Q9Y5E1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.4■■□□□ 1.82
PCDHB9Q9Y5E1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB9Q9Y5E1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.38■■□□□ 1.81
PCDHB9Q9Y5E1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHB9Q9Y5E1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHB9Q9Y5E1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.37■■□□□ 1.81
PCDHB9Q9Y5E1 HSD17B1P1-201ENST00000590052 955 ntBASIC26.37■■□□□ 1.81
PCDHB9Q9Y5E1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PCDHB9Q9Y5E1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB9Q9Y5E1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.36■■□□□ 1.81
PCDHB9Q9Y5E1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB9Q9Y5E1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.35■■□□□ 1.81
PCDHB9Q9Y5E1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB9Q9Y5E1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB9Q9Y5E1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB9Q9Y5E1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB9Q9Y5E1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB9Q9Y5E1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB9Q9Y5E1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHB9Q9Y5E1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB9Q9Y5E1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB9Q9Y5E1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB9Q9Y5E1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHB9Q9Y5E1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
PCDHB9Q9Y5E1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
PCDHB9Q9Y5E1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
PCDHB9Q9Y5E1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB9Q9Y5E1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHB9Q9Y5E1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB9Q9Y5E1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHB9Q9Y5E1 DUX4L11-201ENST00000611504 1267 ntBASIC26.29■■□□□ 1.8
PCDHB9Q9Y5E1 DUX4L12-201ENST00000614593 1267 ntBASIC26.29■■□□□ 1.8
PCDHB9Q9Y5E1 DUX4L14-201ENST00000621227 1267 ntBASIC26.29■■□□□ 1.8
PCDHB9Q9Y5E1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB9Q9Y5E1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB9Q9Y5E1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
PCDHB9Q9Y5E1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB9Q9Y5E1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB9Q9Y5E1 AC127502.1-201ENST00000399971 1502 ntBASIC26.26■■□□□ 1.79
PCDHB9Q9Y5E1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
PCDHB9Q9Y5E1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
PCDHB9Q9Y5E1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDHB9Q9Y5E1 LINC01971-201ENST00000617888 1048 ntBASIC26.26■■□□□ 1.79
PCDHB9Q9Y5E1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB9Q9Y5E1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDHB9Q9Y5E1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB9Q9Y5E1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB9Q9Y5E1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.25■■□□□ 1.79
PCDHB9Q9Y5E1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB9Q9Y5E1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB9Q9Y5E1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PCDHB9Q9Y5E1 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.23■■□□□ 1.79
PCDHB9Q9Y5E1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDHB9Q9Y5E1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB9Q9Y5E1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB9Q9Y5E1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB9Q9Y5E1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB9Q9Y5E1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB9Q9Y5E1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PCDHB9Q9Y5E1 CR559946.2-201ENST00000623684 991 ntBASIC26.21■■□□□ 1.79
PCDHB9Q9Y5E1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB9Q9Y5E1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB9Q9Y5E1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHB9Q9Y5E1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHB9Q9Y5E1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHB9Q9Y5E1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHB9Q9Y5E1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHB9Q9Y5E1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB9Q9Y5E1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB9Q9Y5E1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB9Q9Y5E1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB9Q9Y5E1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB9Q9Y5E1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PCDHB9Q9Y5E1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDHB9Q9Y5E1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHB9Q9Y5E1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PCDHB9Q9Y5E1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHB9Q9Y5E1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHB9Q9Y5E1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PCDHB9Q9Y5E1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHB9Q9Y5E1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.15■■□□□ 1.78
PCDHB9Q9Y5E1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB9Q9Y5E1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB9Q9Y5E1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB9Q9Y5E1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB9Q9Y5E1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB9Q9Y5E1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
PCDHB9Q9Y5E1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
PCDHB9Q9Y5E1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB9Q9Y5E1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
PCDHB9Q9Y5E1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms