Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MIR6090-201ENST00000622481 60 ntBASIC27.6■■■□□ 2.01
PCDHGC3Q9UN70 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHGC3Q9UN70 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHGC3Q9UN70 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHGC3Q9UN70 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHGC3Q9UN70 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHGC3Q9UN70 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.57■■■□□ 2
PCDHGC3Q9UN70 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHGC3Q9UN70 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
PCDHGC3Q9UN70 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
PCDHGC3Q9UN70 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHGC3Q9UN70 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PCDHGC3Q9UN70 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHGC3Q9UN70 AC044849.2-201ENST00000606596 710 ntBASIC27.53■■■□□ 2
PCDHGC3Q9UN70 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHGC3Q9UN70 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.53■■■□□ 2
PCDHGC3Q9UN70 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
PCDHGC3Q9UN70 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.52■■■□□ 2
PCDHGC3Q9UN70 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
PCDHGC3Q9UN70 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCDHGC3Q9UN70 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCDHGC3Q9UN70 AP004833.2-201ENST00000532228 1454 ntBASIC27.51■■■□□ 2
PCDHGC3Q9UN70 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGC3Q9UN70 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.51■■□□□ 1.99
PCDHGC3Q9UN70 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGC3Q9UN70 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGC3Q9UN70 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
PCDHGC3Q9UN70 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.49■■□□□ 1.99
PCDHGC3Q9UN70 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
PCDHGC3Q9UN70 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHGC3Q9UN70 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.49■■□□□ 1.99
PCDHGC3Q9UN70 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHGC3Q9UN70 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDHGC3Q9UN70 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHGC3Q9UN70 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHGC3Q9UN70 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHGC3Q9UN70 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.46■■□□□ 1.99
PCDHGC3Q9UN70 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.45■■□□□ 1.98
PCDHGC3Q9UN70 RPS2P35-201ENST00000443417 897 ntBASIC27.45■■□□□ 1.98
PCDHGC3Q9UN70 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.45■■□□□ 1.98
PCDHGC3Q9UN70 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.44■■□□□ 1.98
PCDHGC3Q9UN70 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.44■■□□□ 1.98
PCDHGC3Q9UN70 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHGC3Q9UN70 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.43■■□□□ 1.98
PCDHGC3Q9UN70 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGC3Q9UN70 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGC3Q9UN70 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGC3Q9UN70 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGC3Q9UN70 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGC3Q9UN70 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGC3Q9UN70 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGC3Q9UN70 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
PCDHGC3Q9UN70 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHGC3Q9UN70 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHGC3Q9UN70 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.4■■□□□ 1.98
PCDHGC3Q9UN70 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.4■■□□□ 1.98
PCDHGC3Q9UN70 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHGC3Q9UN70 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.39■■□□□ 1.98
PCDHGC3Q9UN70 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PCDHGC3Q9UN70 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PCDHGC3Q9UN70 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHGC3Q9UN70 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHGC3Q9UN70 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.37■■□□□ 1.97
PCDHGC3Q9UN70 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.37■■□□□ 1.97
PCDHGC3Q9UN70 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGC3Q9UN70 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGC3Q9UN70 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.36■■□□□ 1.97
PCDHGC3Q9UN70 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
PCDHGC3Q9UN70 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGC3Q9UN70 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGC3Q9UN70 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGC3Q9UN70 LINC00273-201ENST00000539813 1452 ntBASIC27.35■■□□□ 1.97
PCDHGC3Q9UN70 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.34■■□□□ 1.97
PCDHGC3Q9UN70 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
PCDHGC3Q9UN70 AC135983.2-203ENST00000454486 1613 ntBASIC27.33■■□□□ 1.97
PCDHGC3Q9UN70 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHGC3Q9UN70 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
PCDHGC3Q9UN70 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGC3Q9UN70 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGC3Q9UN70 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
PCDHGC3Q9UN70 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PCDHGC3Q9UN70 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGC3Q9UN70 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGC3Q9UN70 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGC3Q9UN70 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGC3Q9UN70 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
PCDHGC3Q9UN70 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
PCDHGC3Q9UN70 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
PCDHGC3Q9UN70 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.28■■□□□ 1.96
PCDHGC3Q9UN70 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
PCDHGC3Q9UN70 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGC3Q9UN70 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGC3Q9UN70 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.27■■□□□ 1.96
PCDHGC3Q9UN70 DRD5P2-201ENST00000421395 2012 ntBASIC27.27■■□□□ 1.96
PCDHGC3Q9UN70 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGC3Q9UN70 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.26■■□□□ 1.96
PCDHGC3Q9UN70 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHGC3Q9UN70 WHAMMP2-203ENST00000563942 1603 ntBASIC27.26■■□□□ 1.95
PCDHGC3Q9UN70 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHGC3Q9UN70 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms