Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZCCHC4Q9H5U6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.71■■□□□ 1.23
ZCCHC4Q9H5U6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
ZCCHC4Q9H5U6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.7■■□□□ 1.22
ZCCHC4Q9H5U6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.7■■□□□ 1.22
ZCCHC4Q9H5U6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
ZCCHC4Q9H5U6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZCCHC4Q9H5U6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
ZCCHC4Q9H5U6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZCCHC4Q9H5U6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZCCHC4Q9H5U6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZCCHC4Q9H5U6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZCCHC4Q9H5U6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
ZCCHC4Q9H5U6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZCCHC4Q9H5U6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.66■■□□□ 1.22
ZCCHC4Q9H5U6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.66■■□□□ 1.22
ZCCHC4Q9H5U6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZCCHC4Q9H5U6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZCCHC4Q9H5U6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.65■■□□□ 1.22
ZCCHC4Q9H5U6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ZCCHC4Q9H5U6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZCCHC4Q9H5U6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
ZCCHC4Q9H5U6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZCCHC4Q9H5U6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
ZCCHC4Q9H5U6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZCCHC4Q9H5U6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.63■■□□□ 1.21
ZCCHC4Q9H5U6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
ZCCHC4Q9H5U6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.63■■□□□ 1.21
ZCCHC4Q9H5U6 AC010864.1-201ENST00000609407 1511 ntBASIC22.62■■□□□ 1.21
ZCCHC4Q9H5U6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZCCHC4Q9H5U6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZCCHC4Q9H5U6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZCCHC4Q9H5U6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ZCCHC4Q9H5U6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ZCCHC4Q9H5U6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ZCCHC4Q9H5U6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZCCHC4Q9H5U6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZCCHC4Q9H5U6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.6■■□□□ 1.21
ZCCHC4Q9H5U6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.6■■□□□ 1.21
ZCCHC4Q9H5U6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
ZCCHC4Q9H5U6 BX255925.1-201ENST00000566954 1854 ntBASIC22.6■■□□□ 1.21
ZCCHC4Q9H5U6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZCCHC4Q9H5U6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZCCHC4Q9H5U6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ZCCHC4Q9H5U6 RARRES2P7-201ENST00000567349 469 ntBASIC22.59■■□□□ 1.21
ZCCHC4Q9H5U6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
ZCCHC4Q9H5U6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
ZCCHC4Q9H5U6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.59■■□□□ 1.21
ZCCHC4Q9H5U6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZCCHC4Q9H5U6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ZCCHC4Q9H5U6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
ZCCHC4Q9H5U6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.58■■□□□ 1.21
ZCCHC4Q9H5U6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ZCCHC4Q9H5U6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ZCCHC4Q9H5U6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.58■■□□□ 1.2
ZCCHC4Q9H5U6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
ZCCHC4Q9H5U6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.57■■□□□ 1.2
ZCCHC4Q9H5U6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
ZCCHC4Q9H5U6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZCCHC4Q9H5U6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
ZCCHC4Q9H5U6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZCCHC4Q9H5U6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZCCHC4Q9H5U6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZCCHC4Q9H5U6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.55■■□□□ 1.2
ZCCHC4Q9H5U6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
ZCCHC4Q9H5U6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZCCHC4Q9H5U6 SETD8P1-201ENST00000623146 1180 ntBASIC22.55■■□□□ 1.2
ZCCHC4Q9H5U6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZCCHC4Q9H5U6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.54■■□□□ 1.2
ZCCHC4Q9H5U6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.54■■□□□ 1.2
ZCCHC4Q9H5U6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.54■■□□□ 1.2
ZCCHC4Q9H5U6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZCCHC4Q9H5U6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZCCHC4Q9H5U6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZCCHC4Q9H5U6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZCCHC4Q9H5U6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZCCHC4Q9H5U6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZCCHC4Q9H5U6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ZCCHC4Q9H5U6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.51■■□□□ 1.19
ZCCHC4Q9H5U6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
ZCCHC4Q9H5U6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZCCHC4Q9H5U6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZCCHC4Q9H5U6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZCCHC4Q9H5U6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZCCHC4Q9H5U6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
ZCCHC4Q9H5U6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZCCHC4Q9H5U6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZCCHC4Q9H5U6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZCCHC4Q9H5U6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.48■■□□□ 1.19
ZCCHC4Q9H5U6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZCCHC4Q9H5U6 AP004833.2-201ENST00000532228 1454 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms