Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRTM2Q8N967 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRTM2Q8N967 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRTM2Q8N967 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRTM2Q8N967 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM2Q8N967 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LRTM2Q8N967 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM2Q8N967 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM2Q8N967 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.25■□□□□ 0.99
LRTM2Q8N967 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM2Q8N967 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM2Q8N967 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.25■□□□□ 0.99
LRTM2Q8N967 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM2Q8N967 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM2Q8N967 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.24■□□□□ 0.99
LRTM2Q8N967 AP004833.2-201ENST00000532228 1454 ntBASIC21.23■□□□□ 0.99
LRTM2Q8N967 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.23■□□□□ 0.99
LRTM2Q8N967 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM2Q8N967 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM2Q8N967 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM2Q8N967 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM2Q8N967 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.21■□□□□ 0.99
LRTM2Q8N967 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRTM2Q8N967 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LRTM2Q8N967 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.2■□□□□ 0.98
LRTM2Q8N967 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.2■□□□□ 0.98
LRTM2Q8N967 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM2Q8N967 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRTM2Q8N967 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM2Q8N967 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRTM2Q8N967 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRTM2Q8N967 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRTM2Q8N967 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRTM2Q8N967 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM2Q8N967 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.17■□□□□ 0.98
LRTM2Q8N967 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM2Q8N967 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM2Q8N967 AC135731.1-201ENST00000569415 2548 ntBASIC21.16■□□□□ 0.98
LRTM2Q8N967 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM2Q8N967 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM2Q8N967 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LRTM2Q8N967 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRTM2Q8N967 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LRTM2Q8N967 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
LRTM2Q8N967 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.15■□□□□ 0.98
LRTM2Q8N967 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRTM2Q8N967 LINC01003-201ENST00000564834 1764 ntBASIC21.13■□□□□ 0.97
LRTM2Q8N967 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRTM2Q8N967 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRTM2Q8N967 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.12■□□□□ 0.97
LRTM2Q8N967 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.12■□□□□ 0.97
LRTM2Q8N967 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
LRTM2Q8N967 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LRTM2Q8N967 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM2Q8N967 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM2Q8N967 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LRTM2Q8N967 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LRTM2Q8N967 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM2Q8N967 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.1■□□□□ 0.97
LRTM2Q8N967 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.09■□□□□ 0.97
LRTM2Q8N967 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
LRTM2Q8N967 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LRTM2Q8N967 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
LRTM2Q8N967 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM2Q8N967 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM2Q8N967 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM2Q8N967 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.08■□□□□ 0.97
LRTM2Q8N967 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRTM2Q8N967 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LRTM2Q8N967 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.07■□□□□ 0.96
LRTM2Q8N967 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.07■□□□□ 0.96
LRTM2Q8N967 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRTM2Q8N967 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.07■□□□□ 0.96
LRTM2Q8N967 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.07■□□□□ 0.96
LRTM2Q8N967 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRTM2Q8N967 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM2Q8N967 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LRTM2Q8N967 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
LRTM2Q8N967 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM2Q8N967 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
LRTM2Q8N967 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM2Q8N967 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM2Q8N967 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.05■□□□□ 0.96
LRTM2Q8N967 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM2Q8N967 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM2Q8N967 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRTM2Q8N967 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRTM2Q8N967 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRTM2Q8N967 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRTM2Q8N967 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRTM2Q8N967 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRTM2Q8N967 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRTM2Q8N967 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRTM2Q8N967 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRTM2Q8N967 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.02■□□□□ 0.95
LRTM2Q8N967 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRTM2Q8N967 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
LRTM2Q8N967 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRTM2Q8N967 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.01■□□□□ 0.95
LRTM2Q8N967 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms