Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.58■■■□□ 2.01
LRTM2Q8N967 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
LRTM2Q8N967 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
LRTM2Q8N967 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.04■■□□□ 1.92
LRTM2Q8N967 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LRTM2Q8N967 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
LRTM2Q8N967 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.7■■□□□ 1.87
LRTM2Q8N967 AL356512.1-201ENST00000607453 1739 ntBASIC26.69■■□□□ 1.86
LRTM2Q8N967 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRTM2Q8N967 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
LRTM2Q8N967 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.49■■□□□ 1.83
LRTM2Q8N967 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
LRTM2Q8N967 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
LRTM2Q8N967 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.35■■□□□ 1.81
LRTM2Q8N967 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
LRTM2Q8N967 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.13■■□□□ 1.77
LRTM2Q8N967 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LRTM2Q8N967 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
LRTM2Q8N967 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
LRTM2Q8N967 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
LRTM2Q8N967 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LRTM2Q8N967 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
LRTM2Q8N967 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRTM2Q8N967 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRTM2Q8N967 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LRTM2Q8N967 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LRTM2Q8N967 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
LRTM2Q8N967 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRTM2Q8N967 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.39■■□□□ 1.65
LRTM2Q8N967 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRTM2Q8N967 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
LRTM2Q8N967 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRTM2Q8N967 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRTM2Q8N967 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRTM2Q8N967 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
LRTM2Q8N967 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LRTM2Q8N967 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.01■■□□□ 1.59
LRTM2Q8N967 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRTM2Q8N967 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.97■■□□□ 1.59
LRTM2Q8N967 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRTM2Q8N967 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LRTM2Q8N967 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LRTM2Q8N967 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRTM2Q8N967 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRTM2Q8N967 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.69■■□□□ 1.54
LRTM2Q8N967 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
LRTM2Q8N967 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRTM2Q8N967 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC24.57■■□□□ 1.52
LRTM2Q8N967 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRTM2Q8N967 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRTM2Q8N967 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.56■■□□□ 1.52
LRTM2Q8N967 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRTM2Q8N967 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
LRTM2Q8N967 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LRTM2Q8N967 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LRTM2Q8N967 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LRTM2Q8N967 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRTM2Q8N967 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.37■■□□□ 1.49
LRTM2Q8N967 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRTM2Q8N967 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
LRTM2Q8N967 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
LRTM2Q8N967 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
LRTM2Q8N967 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
LRTM2Q8N967 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LRTM2Q8N967 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
LRTM2Q8N967 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.31■■□□□ 1.48
LRTM2Q8N967 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRTM2Q8N967 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.27■■□□□ 1.48
LRTM2Q8N967 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LRTM2Q8N967 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.25■■□□□ 1.47
LRTM2Q8N967 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRTM2Q8N967 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRTM2Q8N967 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.13■■□□□ 1.45
LRTM2Q8N967 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
LRTM2Q8N967 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LRTM2Q8N967 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.08■■□□□ 1.45
LRTM2Q8N967 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
LRTM2Q8N967 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRTM2Q8N967 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRTM2Q8N967 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
LRTM2Q8N967 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
LRTM2Q8N967 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.04■■□□□ 1.44
LRTM2Q8N967 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
LRTM2Q8N967 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRTM2Q8N967 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.99■■□□□ 1.43
LRTM2Q8N967 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.99■■□□□ 1.43
LRTM2Q8N967 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.99■■□□□ 1.43
LRTM2Q8N967 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRTM2Q8N967 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRTM2Q8N967 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LRTM2Q8N967 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.94■■□□□ 1.42
LRTM2Q8N967 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRTM2Q8N967 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC23.93■■□□□ 1.42
LRTM2Q8N967 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRTM2Q8N967 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.91■■□□□ 1.42
LRTM2Q8N967 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRTM2Q8N967 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRTM2Q8N967 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
LRTM2Q8N967 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRTM2Q8N967 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms