Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 DGAT1-204ENST00000525371 840 ntTSL 525.58■■□□□ 1.696e-6■■■□□ 15.1
HNRNPUQ00839 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.186e-6■■■□□ 15.1
HNRNPUQ00839 MT-RNR2-201ENST00000387347 1559 ntBASIC7.41□□□□□ -1.221e-323■■■□□ 15.1
HNRNPUQ00839 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.06■■□□□ 1.288e-11■■■□□ 15.1
HNRNPUQ00839 MEG3-218ENST00000521812 635 ntTSL 220.22■□□□□ 0.838e-11■■■□□ 15.1
HNRNPUQ00839 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.23e-7■■■□□ 15.1
HNRNPUQ00839 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC37.43■■■■□ 3.582e-6■■■□□ 15
HNRNPUQ00839 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.382e-6■■■□□ 15
HNRNPUQ00839 LINC00963-205ENST00000444184 1887 ntTSL 1 (best)26.59■■□□□ 1.852e-9■■■□□ 15
HNRNPUQ00839 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC22.09■■□□□ 1.132e-9■■■□□ 15
HNRNPUQ00839 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.85■□□□□ 0.612e-9■■■□□ 15
HNRNPUQ00839 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC16.27■□□□□ 0.22e-9■■■□□ 15
HNRNPUQ00839 LINC00963-220ENST00000625171 830 ntTSL 515.69■□□□□ 0.12e-9■■■□□ 15
HNRNPUQ00839 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC15.67■□□□□ 0.12e-9■■■□□ 15
HNRNPUQ00839 LINC00963-213ENST00000622120 355 ntTSL 515.66■□□□□ 0.12e-9■■■□□ 15
HNRNPUQ00839 LINC00963-210ENST00000608272 612 ntTSL 515.04■□□□□ -02e-9■■■□□ 15
HNRNPUQ00839 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC14.78□□□□□ -0.042e-9■■■□□ 15
HNRNPUQ00839 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC13.44□□□□□ -0.262e-9■■■□□ 15
HNRNPUQ00839 LINC00963-207ENST00000454635 910 ntTSL 5 BASIC13.33□□□□□ -0.282e-9■■■□□ 15
HNRNPUQ00839 LINC00963-214ENST00000622680 781 ntTSL 1 (best)13.3□□□□□ -0.282e-9■■■□□ 15
HNRNPUQ00839 LINC00963-219ENST00000624390 472 ntTSL 510.71□□□□□ -0.692e-9■■■□□ 15
HNRNPUQ00839 LINC00963-209ENST00000607931 473 ntTSL 59.92□□□□□ -0.822e-9■■■□□ 15
HNRNPUQ00839 LINC00963-218ENST00000624138 261 ntTSL 58.28□□□□□ -1.082e-9■■■□□ 15
HNRNPUQ00839 LINC00963-215ENST00000622972 444 ntTSL 57.6□□□□□ -1.192e-9■■■□□ 15
HNRNPUQ00839 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.238e-7■■■□□ 14.9
HNRNPUQ00839 BABAM2-202ENST00000344773 1852 ntTSL 2 BASIC13.53□□□□□ -0.248e-7■■■□□ 14.9
HNRNPUQ00839 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.98e-7■■■□□ 14.9
HNRNPUQ00839 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC9.42□□□□□ -0.98e-7■■■□□ 14.9
HNRNPUQ00839 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.69□□□□□ -1.028e-7■■■□□ 14.9
HNRNPUQ00839 BLVRB-203ENST00000597870 1392 ntTSL 523.97■■□□□ 1.437e-18■■■□□ 14.9
HNRNPUQ00839 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.517e-18■■■□□ 14.9
HNRNPUQ00839 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC17.37■□□□□ 0.377e-18■■■□□ 14.9
HNRNPUQ00839 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.632e-6■■■□□ 14.9
HNRNPUQ00839 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.527e-7■■■□□ 14.8
HNRNPUQ00839 GRAMD1B-213ENST00000633646 847 ntTSL 321.32■■□□□ 17e-7■■■□□ 14.8
HNRNPUQ00839 GRAMD1B-212ENST00000633087 577 ntTSL 418.97■□□□□ 0.637e-7■■■□□ 14.8
HNRNPUQ00839 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC27.11■■□□□ 1.933e-6■■■□□ 14.8
HNRNPUQ00839 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.663e-6■■■□□ 14.8
HNRNPUQ00839 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.653e-6■■■□□ 14.8
HNRNPUQ00839 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC23.24■■□□□ 1.313e-6■■■□□ 14.8
HNRNPUQ00839 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC22.9■■□□□ 1.263e-6■■■□□ 14.8
HNRNPUQ00839 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC20.67■□□□□ 0.93e-6■■■□□ 14.8
HNRNPUQ00839 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.793e-6■■■□□ 14.8
HNRNPUQ00839 NKD1-203ENST00000566396 748 ntTSL 316.85■□□□□ 0.292e-8■■■□□ 14.8
HNRNPUQ00839 WDR6-213ENST00000473238 568 ntTSL 325.06■■□□□ 1.66e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-214ENST00000488572 610 ntTSL 424.15■■□□□ 1.466e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC23.42■■□□□ 1.346e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.29■■□□□ 1.326e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-206ENST00000438660 852 ntTSL 522.09■■□□□ 1.136e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-205ENST00000429900 563 ntTSL 521.38■■□□□ 1.016e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-210ENST00000462064 589 ntTSL 521.38■■□□□ 1.016e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-216ENST00000489684 1155 ntTSL 220.89■□□□□ 0.936e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-212ENST00000472878 556 ntTSL 520.67■□□□□ 0.96e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-209ENST00000461687 555 ntTSL 419.85■□□□□ 0.776e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC18.01■□□□□ 0.476e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-211ENST00000471162 3565 ntTSL 1 (best)17.16■□□□□ 0.346e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-204ENST00000420783 3656 ntTSL 1 (best)16.94■□□□□ 0.36e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC16.27■□□□□ 0.26e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC16.05■□□□□ 0.166e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-208ENST00000452875 3916 ntTSL 1 (best)15.96■□□□□ 0.156e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.056e-7■■■□□ 14.8
HNRNPUQ00839 WDR6-203ENST00000419837 538 ntTSL 414.08□□□□□ -0.166e-7■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-217ENST00000497907 764 ntTSL 324.03■■□□□ 1.442e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-216ENST00000495070 571 ntTSL 419.97■□□□□ 0.792e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.662e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC17.99■□□□□ 0.472e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.392e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-213ENST00000476273 668 ntTSL 317.26■□□□□ 0.352e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC16.26■□□□□ 0.192e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-207ENST00000465079 693 ntTSL 215.06■□□□□ 02e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-211ENST00000471589 892 ntTSL 514.98□□□□□ -0.012e-6■■■□□ 14.8
HNRNPUQ00839 ARHGEF2-214ENST00000477754 883 ntTSL 58.39□□□□□ -1.072e-6■■■□□ 14.8
HNRNPUQ00839 MEG3-215ENST00000520714 1351 ntTSL 523.49■■□□□ 1.358e-8■■■□□ 14.8
HNRNPUQ00839 MEG3-207ENST00000424076 2672 ntTSL 519.78■□□□□ 0.768e-8■■■□□ 14.8
HNRNPUQ00839 MEG3-221ENST00000523671 2368 ntTSL 518.43■□□□□ 0.548e-8■■■□□ 14.8
HNRNPUQ00839 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC30.27■■■□□ 2.446e-7■■□□□ 14.5
HNRNPUQ00839 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC30.27■■■□□ 2.446e-7■■□□□ 14.5
HNRNPUQ00839 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.936e-7■■□□□ 14.5
HNRNPUQ00839 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC26.38■■□□□ 1.816e-7■■□□□ 14.5
HNRNPUQ00839 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC16.37■□□□□ 0.216e-7■■□□□ 14.5
HNRNPUQ00839 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.171e-6■■□□□ 14.5
HNRNPUQ00839 NOL3-212ENST00000568199 613 ntTSL 321.11■□□□□ 0.972e-8■■□□□ 14.4
HNRNPUQ00839 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.384e-8■■□□□ 14.4
HNRNPUQ00839 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.294e-8■■□□□ 14.4
HNRNPUQ00839 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC14.78□□□□□ -0.048e-8■■□□□ 14.4
HNRNPUQ00839 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.742e-6■■□□□ 14.3
HNRNPUQ00839 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC23.48■■□□□ 1.352e-6■■□□□ 14.3
HNRNPUQ00839 MSI2-210ENST00000579505 577 ntTSL 323.19■■□□□ 1.32e-11■■□□□ 14.3
HNRNPUQ00839 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC20.7■□□□□ 0.95e-7■■□□□ 14.3
HNRNPUQ00839 HNRNPUL1-206ENST00000594207 816 ntTSL 516.12■□□□□ 0.175e-7■■□□□ 14.3
HNRNPUQ00839 MSI2-216ENST00000582772 398 ntTSL 35.48□□□□□ -1.532e-11■■□□□ 14.3
HNRNPUQ00839 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)16.7■□□□□ 0.261e-6■■□□□ 14.3
HNRNPUQ00839 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.311e-6■■□□□ 14.3
HNRNPUQ00839 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.553e-6■■□□□ 14.3
HNRNPUQ00839 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC36.86■■■■□ 3.493e-6■■□□□ 14.3
HNRNPUQ00839 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC36.52■■■■□ 3.443e-6■■□□□ 14.3
HNRNPUQ00839 FTCD-212ENST00000498355 1936 ntTSL 236.15■■■■□ 3.383e-6■■□□□ 14.3
HNRNPUQ00839 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.153e-6■■□□□ 14.3
HNRNPUQ00839 SLC2A1-202ENST00000415851 578 ntTSL 224.43■■□□□ 1.58e-7■■□□□ 14.3
HNRNPUQ00839 SLC2A1-206ENST00000625233 1031 ntTSL 222.38■■□□□ 1.178e-7■■□□□ 14.3
Retrieved 100 of 2,288 protein–RNA pairs in 23.1 ms