RNA–Protein interactions for RNA: ENST00000608272.1

LINC00963-210, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 612 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-210ENST00000608272 NISCHQ9Y2I1 1504 aa33.3■■■□□ 2.92
LINC00963-210ENST00000608272 ABCC9O60706 1549 aa30.49■■■□□ 2.47
LINC00963-210ENST00000608272 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
LINC00963-210ENST00000608272 DNAJC5BQ9UF47 199 aa29.03■■■□□ 2.24
LINC00963-210ENST00000608272 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
LINC00963-210ENST00000608272 NACADO15069 1562 aa28.71■■■□□ 2.19
LINC00963-210ENST00000608272 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
LINC00963-210ENST00000608272 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
LINC00963-210ENST00000608272 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
LINC00963-210ENST00000608272 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
LINC00963-210ENST00000608272 BICRAQ9NZM4 1560 aa28.06■■■□□ 2.08
LINC00963-210ENST00000608272 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
LINC00963-210ENST00000608272 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.02
LINC00963-210ENST00000608272 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
LINC00963-210ENST00000608272 CC2D2AQ9P2K1 1620 aa27.6■■■□□ 2.01
LINC00963-210ENST00000608272 ZCCHC6Q5VYS8 1495 aaKnown RBP27.49■■□□□ 1.99
LINC00963-210ENST00000608272 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
LINC00963-210ENST00000608272 DNAJC5Q9H3Z4 198 aa27.26■■□□□ 1.95
LINC00963-210ENST00000608272 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
LINC00963-210ENST00000608272 CUX2O14529 1486 aa26.74■■□□□ 1.87
LINC00963-210ENST00000608272 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
LINC00963-210ENST00000608272 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
LINC00963-210ENST00000608272 HMGXB3Q12766 1538 aa26.25■■□□□ 1.79
LINC00963-210ENST00000608272 ATAD2BQ9ULI0 1458 aa26.24■■□□□ 1.79
LINC00963-210ENST00000608272 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
LINC00963-210ENST00000608272 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
LINC00963-210ENST00000608272 NESP48681 1621 aa26■■□□□ 1.75
LINC00963-210ENST00000608272 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
LINC00963-210ENST00000608272 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
LINC00963-210ENST00000608272 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
LINC00963-210ENST00000608272 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
LINC00963-210ENST00000608272 BAZ1AQ9NRL2 1556 aaPredicted RBP25.94■■□□□ 1.74
LINC00963-210ENST00000608272 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
LINC00963-210ENST00000608272 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
LINC00963-210ENST00000608272 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
LINC00963-210ENST00000608272 CADPSQ9ULU8 1353 aa25.61■■□□□ 1.69
LINC00963-210ENST00000608272 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
LINC00963-210ENST00000608272 WDR62O43379 1518 aa25.57■■□□□ 1.68
LINC00963-210ENST00000608272 MROH2BQ7Z745 1585 aa25.54■■□□□ 1.68
LINC00963-210ENST00000608272 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
LINC00963-210ENST00000608272 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
LINC00963-210ENST00000608272 FANCD2Q9BXW9 1451 aa25.27■■□□□ 1.64
LINC00963-210ENST00000608272 CFTRP13569 1480 aa25.21■■□□□ 1.63
LINC00963-210ENST00000608272 WIZO95785 1651 aa25.17■■□□□ 1.62
LINC00963-210ENST00000608272 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
LINC00963-210ENST00000608272 RIMBP3CA6NJZ7 1639 aa25■■□□□ 1.59
LINC00963-210ENST00000608272 RIMBP3BA6NNM3 1639 aa25■■□□□ 1.59
LINC00963-210ENST00000608272 RIMBP3Q9UFD9 1639 aa25■■□□□ 1.59
LINC00963-210ENST00000608272 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
LINC00963-210ENST00000608272 IFT140Q96RY7 1462 aa24.94■■□□□ 1.58
LINC00963-210ENST00000608272 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
LINC00963-210ENST00000608272 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
LINC00963-210ENST00000608272 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
LINC00963-210ENST00000608272 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
LINC00963-210ENST00000608272 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
LINC00963-210ENST00000608272 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
LINC00963-210ENST00000608272 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
LINC00963-210ENST00000608272 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
LINC00963-210ENST00000608272 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
LINC00963-210ENST00000608272 CCDC88BA6NC98 1476 aa24.61■■□□□ 1.53
LINC00963-210ENST00000608272 ARAP1Q96P48 1450 aa24.59■■□□□ 1.53
LINC00963-210ENST00000608272 CHD1O14646 1710 aa24.56■■□□□ 1.52
LINC00963-210ENST00000608272 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
LINC00963-210ENST00000608272 TRHP20396 242 aaPredicted RBP24.55■■□□□ 1.52
LINC00963-210ENST00000608272 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.51
LINC00963-210ENST00000608272 WDR97A6NE52 1622 aa24.48■■□□□ 1.51
LINC00963-210ENST00000608272 POLA1P09884 1462 aaPredicted RBP24.44■■□□□ 1.5
LINC00963-210ENST00000608272 FBLN2P98095 1184 aa24.39■■□□□ 1.49
LINC00963-210ENST00000608272 CLASP1Q7Z460 1538 aa24.36■■□□□ 1.49
LINC00963-210ENST00000608272 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
LINC00963-210ENST00000608272 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
LINC00963-210ENST00000608272 SOGA1O94964 1423 aa24.32■■□□□ 1.48
LINC00963-210ENST00000608272 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
LINC00963-210ENST00000608272 SNAPC4Q5SXM2 1469 aa24.27■■□□□ 1.48
LINC00963-210ENST00000608272 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
LINC00963-210ENST00000608272 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
LINC00963-210ENST00000608272 RAD54L2Q9Y4B4 1467 aa24.25■■□□□ 1.47
LINC00963-210ENST00000608272 GRIN2BQ13224 1484 aa24.23■■□□□ 1.47
LINC00963-210ENST00000608272 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
LINC00963-210ENST00000608272 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
LINC00963-210ENST00000608272 GAPVD1Q14C86 1478 aa24.12■■□□□ 1.45
LINC00963-210ENST00000608272 CUX1P39880 1505 aa24.05■■□□□ 1.44
LINC00963-210ENST00000608272 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
LINC00963-210ENST00000608272 ABCA10Q8WWZ4 1543 aa23.97■■□□□ 1.43
LINC00963-210ENST00000608272 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
LINC00963-210ENST00000608272 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
LINC00963-210ENST00000608272 NUP160Q12769 1436 aa23.86■■□□□ 1.41
LINC00963-210ENST00000608272 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
LINC00963-210ENST00000608272 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
LINC00963-210ENST00000608272 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
LINC00963-210ENST00000608272 ERCC6L2Q5T890 1561 aa23.77■■□□□ 1.4
LINC00963-210ENST00000608272 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
LINC00963-210ENST00000608272 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
LINC00963-210ENST00000608272 KIF13AQ9H1H9 1805 aa23.7■■□□□ 1.39
LINC00963-210ENST00000608272 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
LINC00963-210ENST00000608272 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
LINC00963-210ENST00000608272 MAPKBP1O60336 1514 aa23.6■■□□□ 1.37
LINC00963-210ENST00000608272 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
LINC00963-210ENST00000608272 BIVM-ERCC5R4GMW8 1640 aa23.6■■□□□ 1.37
LINC00963-210ENST00000608272 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms