RNA–Protein interactions for RNA: ENST00000633087.1

GRAMD1B-212, Transcript of GRAM domain containing 1B, humanhuman

TSL 4

Gene GRAMD1B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-212ENST00000633087 NISCHQ9Y2I1 1504 aa37.1■■■■□ 3.53
GRAMD1B-212ENST00000633087 CCDC180Q9P1Z9 1646 aa33.23■■■□□ 2.91
GRAMD1B-212ENST00000633087 ABCC9O60706 1549 aa32.6■■■□□ 2.81
GRAMD1B-212ENST00000633087 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
GRAMD1B-212ENST00000633087 NACADO15069 1562 aa31.22■■■□□ 2.59
GRAMD1B-212ENST00000633087 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
GRAMD1B-212ENST00000633087 MYO15BQ96JP2 1530 aa30.94■■■□□ 2.54
GRAMD1B-212ENST00000633087 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.53
GRAMD1B-212ENST00000633087 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
GRAMD1B-212ENST00000633087 DCAF1Q9Y4B6 1507 aa30.72■■■□□ 2.51
GRAMD1B-212ENST00000633087 BICRAQ9NZM4 1560 aa30.37■■■□□ 2.45
GRAMD1B-212ENST00000633087 PABPN1Q86U42 306 aaKnown RBP eCLIP30.34■■■□□ 2.45
GRAMD1B-212ENST00000633087 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
GRAMD1B-212ENST00000633087 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
GRAMD1B-212ENST00000633087 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
GRAMD1B-212ENST00000633087 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
GRAMD1B-212ENST00000633087 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
GRAMD1B-212ENST00000633087 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
GRAMD1B-212ENST00000633087 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
GRAMD1B-212ENST00000633087 BAZ1AQ9NRL2 1556 aaPredicted RBP28.82■■■□□ 2.2
GRAMD1B-212ENST00000633087 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
GRAMD1B-212ENST00000633087 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
GRAMD1B-212ENST00000633087 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
GRAMD1B-212ENST00000633087 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
GRAMD1B-212ENST00000633087 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
GRAMD1B-212ENST00000633087 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
GRAMD1B-212ENST00000633087 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
GRAMD1B-212ENST00000633087 WIZO95785 1651 aa28.32■■■□□ 2.12
GRAMD1B-212ENST00000633087 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
GRAMD1B-212ENST00000633087 NESP48681 1621 aa28.14■■■□□ 2.09
GRAMD1B-212ENST00000633087 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
GRAMD1B-212ENST00000633087 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
GRAMD1B-212ENST00000633087 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
GRAMD1B-212ENST00000633087 CUX2O14529 1486 aa27.96■■■□□ 2.07
GRAMD1B-212ENST00000633087 KIF21AQ7Z4S6 1674 aa27.93■■■□□ 2.06
GRAMD1B-212ENST00000633087 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
GRAMD1B-212ENST00000633087 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
GRAMD1B-212ENST00000633087 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
GRAMD1B-212ENST00000633087 CFTRP13569 1480 aa27.7■■■□□ 2.02
GRAMD1B-212ENST00000633087 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
GRAMD1B-212ENST00000633087 MRC2Q9UBG0 1479 aa27.63■■■□□ 2.01
GRAMD1B-212ENST00000633087 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
GRAMD1B-212ENST00000633087 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
GRAMD1B-212ENST00000633087 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
GRAMD1B-212ENST00000633087 WDR62O43379 1518 aa27.57■■■□□ 2
GRAMD1B-212ENST00000633087 URB2Q14146 1524 aaKnown RBP27.33■■□□□ 1.97
GRAMD1B-212ENST00000633087 DNAJC5Q9H3Z4 198 aa27.27■■□□□ 1.96
GRAMD1B-212ENST00000633087 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
GRAMD1B-212ENST00000633087 TOPBP1Q92547 1522 aa27.14■■□□□ 1.94
GRAMD1B-212ENST00000633087 ABCC8Q09428 1581 aa27.14■■□□□ 1.93
GRAMD1B-212ENST00000633087 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
GRAMD1B-212ENST00000633087 IFT140Q96RY7 1462 aa27.03■■□□□ 1.92
GRAMD1B-212ENST00000633087 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
GRAMD1B-212ENST00000633087 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
GRAMD1B-212ENST00000633087 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
GRAMD1B-212ENST00000633087 EIF4G3O43432 1585 aaKnown RBP26.88■■□□□ 1.89
GRAMD1B-212ENST00000633087 CUX1P39880 1505 aa26.84■■□□□ 1.89
GRAMD1B-212ENST00000633087 FGD5Q6ZNL6 1462 aa26.8■■□□□ 1.88
GRAMD1B-212ENST00000633087 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
GRAMD1B-212ENST00000633087 WDR97A6NE52 1622 aa26.73■■□□□ 1.87
GRAMD1B-212ENST00000633087 SOGA1O94964 1423 aa26.73■■□□□ 1.87
GRAMD1B-212ENST00000633087 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.86
GRAMD1B-212ENST00000633087 OSCARQ8IYS5 282 aa26.65■■□□□ 1.86
GRAMD1B-212ENST00000633087 CHD1O14646 1710 aa26.64■■□□□ 1.85
GRAMD1B-212ENST00000633087 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
GRAMD1B-212ENST00000633087 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
GRAMD1B-212ENST00000633087 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.85
GRAMD1B-212ENST00000633087 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
GRAMD1B-212ENST00000633087 WRNQ14191 1432 aaPredicted RBP eCLIP26.56■■□□□ 1.84
GRAMD1B-212ENST00000633087 SYNJ1O43426 1573 aa26.55■■□□□ 1.84
GRAMD1B-212ENST00000633087 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
GRAMD1B-212ENST00000633087 SNAPC4Q5SXM2 1469 aa26.5■■□□□ 1.83
GRAMD1B-212ENST00000633087 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
GRAMD1B-212ENST00000633087 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
GRAMD1B-212ENST00000633087 MAGI1Q96QZ7 1491 aaPredicted RBP26.47■■□□□ 1.83
GRAMD1B-212ENST00000633087 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
GRAMD1B-212ENST00000633087 FBLN2P98095 1184 aa26.39■■□□□ 1.82
GRAMD1B-212ENST00000633087 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.81
GRAMD1B-212ENST00000633087 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.81
GRAMD1B-212ENST00000633087 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.81
GRAMD1B-212ENST00000633087 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
GRAMD1B-212ENST00000633087 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
GRAMD1B-212ENST00000633087 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
GRAMD1B-212ENST00000633087 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
GRAMD1B-212ENST00000633087 CLASP1Q7Z460 1538 aa26.27■■□□□ 1.8
GRAMD1B-212ENST00000633087 ADAMTS12P58397 1594 aa26.27■■□□□ 1.8
GRAMD1B-212ENST00000633087 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
GRAMD1B-212ENST00000633087 GRIN2AQ12879 1464 aa26.16■■□□□ 1.78
GRAMD1B-212ENST00000633087 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
GRAMD1B-212ENST00000633087 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
GRAMD1B-212ENST00000633087 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
GRAMD1B-212ENST00000633087 NUP160Q12769 1436 aa26.04■■□□□ 1.76
GRAMD1B-212ENST00000633087 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
GRAMD1B-212ENST00000633087 CUL7Q14999 1698 aa26■■□□□ 1.75
GRAMD1B-212ENST00000633087 CYB5RLQ6IPT4 315 aa25.98■■□□□ 1.75
GRAMD1B-212ENST00000633087 SHROOM2Q13796 1616 aa25.95■■□□□ 1.74
GRAMD1B-212ENST00000633087 RUSC2Q8N2Y8 1516 aa25.89■■□□□ 1.74
GRAMD1B-212ENST00000633087 IGF1RP08069 1367 aa25.88■■□□□ 1.73
GRAMD1B-212ENST00000633087 ERCC6L2Q5T890 1561 aa25.85■■□□□ 1.73
GRAMD1B-212ENST00000633087 CARMIL1Q5VZK9 1371 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms