RNA–Protein interactions for RNA: ENST00000522771.6

MEG3-220, Transcript of maternally expressed 3, humanhuman

TSL 5 BASIC

Gene MEG3, Length 6,984 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-220ENST00000522771 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
MEG3-220ENST00000522771 SUPT5HO00267 1087 aaKnown RBP17.65■□□□□ 0.42
MEG3-220ENST00000522771 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
MEG3-220ENST00000522771 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
MEG3-220ENST00000522771 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
MEG3-220ENST00000522771 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
MEG3-220ENST00000522771 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
MEG3-220ENST00000522771 APLP2Q06481 763 aa16.8■□□□□ 0.28
MEG3-220ENST00000522771 TTBK1Q5TCY1 1321 aaPredicted RBP16.75■□□□□ 0.27
MEG3-220ENST00000522771 ERICH6Q7L0X2 663 aa16.75■□□□□ 0.27
MEG3-220ENST00000522771 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
MEG3-220ENST00000522771 FAM9AQ8IZU1 332 aaPredicted RBP16.7■□□□□ 0.26
MEG3-220ENST00000522771 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
MEG3-220ENST00000522771 CCER1Q8TC90 406 aaPredicted RBP16.56■□□□□ 0.24
MEG3-220ENST00000522771 MYT1Q01538 1121 aa16.53■□□□□ 0.24
MEG3-220ENST00000522771 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
MEG3-220ENST00000522771 RANGAP1P46060 587 aaPredicted RBP16.37■□□□□ 0.21
MEG3-220ENST00000522771 NEFLP07196 543 aa16.31■□□□□ 0.2
MEG3-220ENST00000522771 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
MEG3-220ENST00000522771 ATP1B4Q9UN42 357 aaPredicted RBP16.17■□□□□ 0.18
MEG3-220ENST00000522771 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
MEG3-220ENST00000522771 UBTFP17480 764 aaKnown RBP16.11■□□□□ 0.17
MEG3-220ENST00000522771 HRCP23327 699 aa16.09■□□□□ 0.17
MEG3-220ENST00000522771 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
MEG3-220ENST00000522771 DAXXQ9UER7 740 aaPredicted RBP15.88■□□□□ 0.13
MEG3-220ENST00000522771 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.12
MEG3-220ENST00000522771 ITGAEP38570 1179 aa15.74■□□□□ 0.11
MEG3-220ENST00000522771 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
MEG3-220ENST00000522771 HNRNPUL2Q1KMD3 747 aaKnown RBP15.68■□□□□ 0.1
MEG3-220ENST00000522771 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
MEG3-220ENST00000522771 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
MEG3-220ENST00000522771 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
MEG3-220ENST00000522771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
MEG3-220ENST00000522771 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
MEG3-220ENST00000522771 ZNF316A6NFI3 1004 aaPredicted RBP15.55■□□□□ 0.08
MEG3-220ENST00000522771 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
MEG3-220ENST00000522771 BCANQ96GW7 911 aa15.48■□□□□ 0.07
MEG3-220ENST00000522771 CLSPNQ9HAW4 1339 aa15.44■□□□□ 0.06
MEG3-220ENST00000522771 MYT1LQ9UL68 1186 aa15.4■□□□□ 0.06
MEG3-220ENST00000522771 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
MEG3-220ENST00000522771 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
MEG3-220ENST00000522771 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
MEG3-220ENST00000522771 FAM50AQ14320 339 aaKnown RBP15.27■□□□□ 0.04
MEG3-220ENST00000522771 ACIN1Q9UKV3 1341 aaKnown RBP15.25■□□□□ 0.03
MEG3-220ENST00000522771 ANP32CO43423 234 aa15.23■□□□□ 0.03
MEG3-220ENST00000522771 TRIM52Q96A61 297 aa15.18■□□□□ 0.02
MEG3-220ENST00000522771 ANP32AP39687 249 aaKnown RBP15.07■□□□□ 0
MEG3-220ENST00000522771 ZNF326Q5BKZ1 582 aaKnown RBP15.05■□□□□ 0
MEG3-220ENST00000522771 NPM2Q86SE8 214 aaKnown RBP15.03■□□□□ -0
MEG3-220ENST00000522771 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
MEG3-220ENST00000522771 EIF5BO60841 1220 aaKnown RBP15□□□□□ -0.01
MEG3-220ENST00000522771 CANXP27824 592 aaKnown RBP14.99□□□□□ -0.01
MEG3-220ENST00000522771 BCL11AQ9H165 835 aa14.99□□□□□ -0.01
MEG3-220ENST00000522771 FKBP8Q14318 412 aa14.98□□□□□ -0.01
MEG3-220ENST00000522771 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
MEG3-220ENST00000522771 NBR1Q14596 966 aa14.84□□□□□ -0.03
MEG3-220ENST00000522771 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
MEG3-220ENST00000522771 ANP32BQ92688 251 aaKnown RBP14.79□□□□□ -0.04
MEG3-220ENST00000522771 HNRNPUQ00839 825 aaKnown RBP eCLIP14.78□□□□□ -0.048e-8■■□□□ 14.4
MEG3-220ENST00000522771 GLIPR1L2Q4G1C9 344 aa14.76□□□□□ -0.05
MEG3-220ENST00000522771 DDX10Q13206 875 aaKnown RBP14.74□□□□□ -0.05
MEG3-220ENST00000522771 P3H3Q8IVL6 736 aa14.74□□□□□ -0.05
MEG3-220ENST00000522771 FAM9BQ8IZU0 186 aa14.74□□□□□ -0.05
MEG3-220ENST00000522771 NEFMP07197 916 aa14.73□□□□□ -0.05
MEG3-220ENST00000522771 DCAF1Q9Y4B6 1507 aa14.73□□□□□ -0.05
MEG3-220ENST00000522771 HSP90AA1P07900 732 aaKnown RBP14.73□□□□□ -0.05
MEG3-220ENST00000522771 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
MEG3-220ENST00000522771 ARXQ96QS3 562 aa14.69□□□□□ -0.06
MEG3-220ENST00000522771 UPF2Q9HAU5 1272 aaKnown RBP14.69□□□□□ -0.06
MEG3-220ENST00000522771 ARID3CA6NKF2 412 aa14.68□□□□□ -0.06
MEG3-220ENST00000522771 TONSLQ96HA7 1378 aa14.67□□□□□ -0.06
MEG3-220ENST00000522771 CCDC136Q96JN2 1154 aa14.67□□□□□ -0.06
MEG3-220ENST00000522771 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
MEG3-220ENST00000522771 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
MEG3-220ENST00000522771 IRX6P78412 446 aaPredicted RBP14.64□□□□□ -0.07
MEG3-220ENST00000522771 MIER1Q8N108 512 aa14.64□□□□□ -0.07
MEG3-220ENST00000522771 ZNF777Q9ULD5 760 aaPredicted RBP14.6□□□□□ -0.07
MEG3-220ENST00000522771 FBLN2P98095 1184 aa14.6□□□□□ -0.07
MEG3-220ENST00000522771 ABCC9O60706 1549 aa14.57□□□□□ -0.08
MEG3-220ENST00000522771 TMC1Q8TDI8 760 aa14.55□□□□□ -0.08
MEG3-220ENST00000522771 ANP32EQ9BTT0 268 aa14.52□□□□□ -0.09
MEG3-220ENST00000522771 MRS2Q9HD23 443 aa14.51□□□□□ -0.09
MEG3-220ENST00000522771 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
MEG3-220ENST00000522771 HIRIP3Q9BW71 556 aaPredicted RBP14.49□□□□□ -0.09
MEG3-220ENST00000522771 WDR43Q15061 677 aaKnown RBP eCLIP14.45□□□□□ -0.1
MEG3-220ENST00000522771 DDRGK1Q96HY6 314 aa14.44□□□□□ -0.1
MEG3-220ENST00000522771 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
MEG3-220ENST00000522771 CHIC2Q9UKJ5 165 aa14.42□□□□□ -0.1
MEG3-220ENST00000522771 TRIM44Q96DX7 344 aaPredicted RBP14.4□□□□□ -0.11
MEG3-220ENST00000522771 BECN1Q14457 450 aa14.38□□□□□ -0.11
MEG3-220ENST00000522771 MYO15BQ96JP2 1530 aa14.37□□□□□ -0.11
MEG3-220ENST00000522771 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
MEG3-220ENST00000522771 RTN4Q9NQC3 1192 aaKnown RBP14.36□□□□□ -0.11
MEG3-220ENST00000522771 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
MEG3-220ENST00000522771 SCRIBQ14160 1630 aa14.36□□□□□ -0.11
MEG3-220ENST00000522771 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
MEG3-220ENST00000522771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.12
MEG3-220ENST00000522771 SENP3-EIF4A1A0A087X0R7 540 aa14.31□□□□□ -0.12
MEG3-220ENST00000522771 EIF4G2P78344 907 aaKnown RBP eCLIP14.31□□□□□ -0.12
MEG3-220ENST00000522771 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms