RNA–Protein interactions for RNA: ENST00000579505.5

MSI2-210, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-210ENST00000579505 NISCHQ9Y2I1 1504 aa42.93■■■■■ 4.46
MSI2-210ENST00000579505 CCDC180Q9P1Z9 1646 aa38.12■■■■□ 3.69
MSI2-210ENST00000579505 ABCC9O60706 1549 aa36.83■■■■□ 3.49
MSI2-210ENST00000579505 ZCCHC6Q5VYS8 1495 aaKnown RBP35.85■■■■□ 3.33
MSI2-210ENST00000579505 NACADO15069 1562 aa35.7■■■■□ 3.31
MSI2-210ENST00000579505 RB1CC1Q8TDY2 1594 aa35.65■■■■□ 3.3
MSI2-210ENST00000579505 MYO15BQ96JP2 1530 aa35.62■■■■□ 3.29
MSI2-210ENST00000579505 DCAF1Q9Y4B6 1507 aa35.59■■■■□ 3.29
MSI2-210ENST00000579505 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
MSI2-210ENST00000579505 UNC13AQ9UPW8 1703 aa34.93■■■■□ 3.18
MSI2-210ENST00000579505 SCRIBQ14160 1630 aa34.71■■■■□ 3.15
MSI2-210ENST00000579505 BICRAQ9NZM4 1560 aa34.57■■■■□ 3.13
MSI2-210ENST00000579505 PABPN1Q86U42 306 aaKnown RBP eCLIP34.4■■■■□ 3.11e-5■□□□□ 8.6
MSI2-210ENST00000579505 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
MSI2-210ENST00000579505 EIF4G1Q04637 1599 aaKnown RBP33.62■■■□□ 2.97
MSI2-210ENST00000579505 DNAJC5BQ9UF47 199 aa33.47■■■□□ 2.95
MSI2-210ENST00000579505 CC2D2AQ9P2K1 1620 aa33.4■■■□□ 2.94
MSI2-210ENST00000579505 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
MSI2-210ENST00000579505 SMARCA4P51532 1647 aa33.27■■■□□ 2.92
MSI2-210ENST00000579505 BAZ1AQ9NRL2 1556 aaPredicted RBP33.26■■■□□ 2.92
MSI2-210ENST00000579505 MROH2BQ7Z745 1585 aa33.07■■■□□ 2.88
MSI2-210ENST00000579505 SMARCA2P51531 1590 aa32.97■■■□□ 2.87
MSI2-210ENST00000579505 PEG3Q9GZU2 1588 aa32.97■■■□□ 2.87
MSI2-210ENST00000579505 ATAD2BQ9ULI0 1458 aa32.96■■■□□ 2.87
MSI2-210ENST00000579505 NCAPD3P42695 1498 aa32.91■■■□□ 2.86
MSI2-210ENST00000579505 HMGXB3Q12766 1538 aa32.82■■■□□ 2.84
MSI2-210ENST00000579505 RSF1Q96T23 1441 aaPredicted RBP32.79■■■□□ 2.84
MSI2-210ENST00000579505 WIZO95785 1651 aa32.76■■■□□ 2.84
MSI2-210ENST00000579505 BAZ1BQ9UIG0 1483 aaKnown RBP32.7■■■□□ 2.83
MSI2-210ENST00000579505 TOP2AP11388 1531 aaKnown RBP32.44■■■□□ 2.78
MSI2-210ENST00000579505 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
MSI2-210ENST00000579505 LAMC3Q9Y6N6 1575 aa32.02■■■□□ 2.72
MSI2-210ENST00000579505 CCDC88BA6NC98 1476 aa32.01■■■□□ 2.71
MSI2-210ENST00000579505 NESP48681 1621 aa31.98■■■□□ 2.71
MSI2-210ENST00000579505 CADPSQ9ULU8 1353 aa31.93■■■□□ 2.7
MSI2-210ENST00000579505 CFTRP13569 1480 aa31.84■■■□□ 2.69
MSI2-210ENST00000579505 PRDM2Q13029 1718 aa31.77■■■□□ 2.68
MSI2-210ENST00000579505 PDS5BQ9NTI5 1447 aa31.74■■■□□ 2.67
MSI2-210ENST00000579505 ERCC6Q03468 1493 aa31.72■■■□□ 2.67
MSI2-210ENST00000579505 KIF21AQ7Z4S6 1674 aa31.7■■■□□ 2.67
MSI2-210ENST00000579505 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
MSI2-210ENST00000579505 CEP164Q9UPV0 1460 aa31.52■■■□□ 2.64
MSI2-210ENST00000579505 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.64
MSI2-210ENST00000579505 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
MSI2-210ENST00000579505 WDR62O43379 1518 aa31.34■■■□□ 2.61
MSI2-210ENST00000579505 CUX2O14529 1486 aa31.33■■■□□ 2.61
MSI2-210ENST00000579505 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
MSI2-210ENST00000579505 ABCC8Q09428 1581 aa31.16■■■□□ 2.58
MSI2-210ENST00000579505 DNMBPQ6XZF7 1577 aa31.15■■■□□ 2.58
MSI2-210ENST00000579505 TOPBP1Q92547 1522 aa31.13■■■□□ 2.57
MSI2-210ENST00000579505 CUX1P39880 1505 aa31.02■■■□□ 2.56
MSI2-210ENST00000579505 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
MSI2-210ENST00000579505 BIVM-ERCC5R4GMW8 1640 aa30.9■■■□□ 2.54
MSI2-210ENST00000579505 POLA1P09884 1462 aaPredicted RBP30.88■■■□□ 2.53
MSI2-210ENST00000579505 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
MSI2-210ENST00000579505 SYNJ1O43426 1573 aa30.86■■■□□ 2.53
MSI2-210ENST00000579505 FGD5Q6ZNL6 1462 aa30.85■■■□□ 2.53
MSI2-210ENST00000579505 IFT140Q96RY7 1462 aa30.84■■■□□ 2.53
MSI2-210ENST00000579505 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
MSI2-210ENST00000579505 SOGA1O94964 1423 aa30.72■■■□□ 2.51
MSI2-210ENST00000579505 RAD54L2Q9Y4B4 1467 aa30.7■■■□□ 2.51
MSI2-210ENST00000579505 WDR97A6NE52 1622 aa30.68■■■□□ 2.5
MSI2-210ENST00000579505 ZNF608Q9ULD9 1512 aaPredicted RBP30.65■■■□□ 2.5
MSI2-210ENST00000579505 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
MSI2-210ENST00000579505 ABCA10Q8WWZ4 1543 aa30.58■■■□□ 2.49
MSI2-210ENST00000579505 AQRO60306 1485 aaKnown RBP eCLIP30.5■■■□□ 2.478e-7■■■■■ 26.9
MSI2-210ENST00000579505 ABCA5Q8WWZ7 1642 aa30.48■■■□□ 2.47
MSI2-210ENST00000579505 TDRD9Q8NDG6 1382 aaKnown RBP30.48■■■□□ 2.47
MSI2-210ENST00000579505 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
MSI2-210ENST00000579505 GAPVD1Q14C86 1478 aa30.39■■■□□ 2.46
MSI2-210ENST00000579505 GRIN2BQ13224 1484 aa30.35■■■□□ 2.45
MSI2-210ENST00000579505 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
MSI2-210ENST00000579505 MAGI1Q96QZ7 1491 aaPredicted RBP30.26■■■□□ 2.44
MSI2-210ENST00000579505 SNAPC4Q5SXM2 1469 aa30.25■■■□□ 2.43
MSI2-210ENST00000579505 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
MSI2-210ENST00000579505 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
MSI2-210ENST00000579505 CHD1O14646 1710 aa30.19■■■□□ 2.42
MSI2-210ENST00000579505 CHIC1Q5VXU3 224 aa30.19■■■□□ 2.42
MSI2-210ENST00000579505 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
MSI2-210ENST00000579505 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
MSI2-210ENST00000579505 CUL7Q14999 1698 aa30.07■■■□□ 2.4
MSI2-210ENST00000579505 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
MSI2-210ENST00000579505 IGF1RP08069 1367 aa30.05■■■□□ 2.4
MSI2-210ENST00000579505 RUSC2Q8N2Y8 1516 aa30.05■■■□□ 2.4
MSI2-210ENST00000579505 OSCARQ8IYS5 282 aa30■■■□□ 2.39
MSI2-210ENST00000579505 CHMP7Q8WUX9 453 aaPredicted RBP30■■■□□ 2.39
MSI2-210ENST00000579505 FBLN2P98095 1184 aa29.99■■■□□ 2.39
MSI2-210ENST00000579505 GRIN2AQ12879 1464 aa29.98■■■□□ 2.39
MSI2-210ENST00000579505 DNAJC5Q9H3Z4 198 aa29.91■■■□□ 2.38
MSI2-210ENST00000579505 EEA1Q15075 1411 aa29.9■■■□□ 2.38
MSI2-210ENST00000579505 CARMIL1Q5VZK9 1371 aa29.88■■■□□ 2.37
MSI2-210ENST00000579505 CLASP1Q7Z460 1538 aa29.85■■■□□ 2.37
MSI2-210ENST00000579505 CEP170Q5SW79 1584 aa29.83■■■□□ 2.37
MSI2-210ENST00000579505 NUP160Q12769 1436 aa29.83■■■□□ 2.37
MSI2-210ENST00000579505 RAPGEF2Q9Y4G8 1499 aa29.77■■■□□ 2.36
MSI2-210ENST00000579505 PRXQ9BXM0 1461 aa29.76■■■□□ 2.35
MSI2-210ENST00000579505 CSRNP3Q8WYN3 585 aa29.74■■■□□ 2.35
MSI2-210ENST00000579505 FAM9AQ8IZU1 332 aaPredicted RBP29.64■■■□□ 2.34
MSI2-210ENST00000579505 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
MSI2-210ENST00000579505 KIAA0586Q9BVV6 1533 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms