Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.33■■□□□ 1.81
WNT3AP56704 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
WNT3AP56704 AC108673.1-201ENST00000510422 1159 ntBASIC26.33■■□□□ 1.81
WNT3AP56704 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
WNT3AP56704 MIR6090-201ENST00000622481 60 ntBASIC26.31■■□□□ 1.8
WNT3AP56704 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
WNT3AP56704 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.31■■□□□ 1.8
WNT3AP56704 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
WNT3AP56704 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
WNT3AP56704 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
WNT3AP56704 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
WNT3AP56704 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.29■■□□□ 1.8
WNT3AP56704 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.28■■□□□ 1.8
WNT3AP56704 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
WNT3AP56704 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
WNT3AP56704 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
WNT3AP56704 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.26■■□□□ 1.79
WNT3AP56704 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
WNT3AP56704 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.26■■□□□ 1.79
WNT3AP56704 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
WNT3AP56704 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
WNT3AP56704 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
WNT3AP56704 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
WNT3AP56704 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.24■■□□□ 1.79
WNT3AP56704 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
WNT3AP56704 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
WNT3AP56704 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
WNT3AP56704 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
WNT3AP56704 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
WNT3AP56704 AC044849.2-201ENST00000606596 710 ntBASIC26.21■■□□□ 1.79
WNT3AP56704 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
WNT3AP56704 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
WNT3AP56704 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
WNT3AP56704 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.19■■□□□ 1.78
WNT3AP56704 RPS2P35-201ENST00000443417 897 ntBASIC26.19■■□□□ 1.78
WNT3AP56704 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
WNT3AP56704 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
WNT3AP56704 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
WNT3AP56704 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
WNT3AP56704 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
WNT3AP56704 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
WNT3AP56704 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
WNT3AP56704 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
WNT3AP56704 AP004833.2-201ENST00000532228 1454 ntBASIC26.16■■□□□ 1.78
WNT3AP56704 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
WNT3AP56704 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT3AP56704 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT3AP56704 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.14■■□□□ 1.78
WNT3AP56704 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
WNT3AP56704 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.14■■□□□ 1.78
WNT3AP56704 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.14■■□□□ 1.78
WNT3AP56704 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
WNT3AP56704 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.14■■□□□ 1.77
WNT3AP56704 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.13■■□□□ 1.77
WNT3AP56704 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.13■■□□□ 1.77
WNT3AP56704 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
WNT3AP56704 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
WNT3AP56704 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.1■■□□□ 1.77
WNT3AP56704 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
WNT3AP56704 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.1■■□□□ 1.77
WNT3AP56704 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
WNT3AP56704 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
WNT3AP56704 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.09■■□□□ 1.77
WNT3AP56704 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
WNT3AP56704 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
WNT3AP56704 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
WNT3AP56704 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
WNT3AP56704 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.08■■□□□ 1.77
WNT3AP56704 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
WNT3AP56704 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
WNT3AP56704 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
WNT3AP56704 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
WNT3AP56704 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.07■■□□□ 1.76
WNT3AP56704 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.06■■□□□ 1.76
WNT3AP56704 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
WNT3AP56704 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
WNT3AP56704 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
WNT3AP56704 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
WNT3AP56704 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
WNT3AP56704 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
WNT3AP56704 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
WNT3AP56704 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
WNT3AP56704 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.03■■□□□ 1.76
WNT3AP56704 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
WNT3AP56704 LINC00273-201ENST00000539813 1452 ntBASIC26.02■■□□□ 1.76
WNT3AP56704 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
WNT3AP56704 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
WNT3AP56704 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
WNT3AP56704 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
WNT3AP56704 DRD5P2-201ENST00000421395 2012 ntBASIC26.01■■□□□ 1.75
WNT3AP56704 AC135983.2-203ENST00000454486 1613 ntBASIC26.01■■□□□ 1.75
WNT3AP56704 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26■■□□□ 1.75
WNT3AP56704 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26■■□□□ 1.75
WNT3AP56704 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
WNT3AP56704 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
WNT3AP56704 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.99■■□□□ 1.75
WNT3AP56704 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
WNT3AP56704 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
WNT3AP56704 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
WNT3AP56704 AC021231.2-201ENST00000594613 730 ntBASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms