Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
HIST1H1DP16402 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H1DP16402 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H1DP16402 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H1DP16402 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H1DP16402 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H1DP16402 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
HIST1H1DP16402 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
HIST1H1DP16402 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H1DP16402 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H1DP16402 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
HIST1H1DP16402 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.94■■□□□ 1.1
HIST1H1DP16402 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.94■■□□□ 1.1
HIST1H1DP16402 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H1DP16402 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H1DP16402 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIST1H1DP16402 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HIST1H1DP16402 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.93■■□□□ 1.1
HIST1H1DP16402 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H1DP16402 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H1DP16402 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.92■■□□□ 1.1
HIST1H1DP16402 BX255925.1-201ENST00000566954 1854 ntBASIC21.92■■□□□ 1.1
HIST1H1DP16402 AP004833.2-201ENST00000532228 1454 ntBASIC21.91■■□□□ 1.1
HIST1H1DP16402 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H1DP16402 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
HIST1H1DP16402 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST1H1DP16402 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H1DP16402 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H1DP16402 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.9■■□□□ 1.1
HIST1H1DP16402 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.9■■□□□ 1.1
HIST1H1DP16402 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HIST1H1DP16402 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.89■■□□□ 1.1
HIST1H1DP16402 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.89■■□□□ 1.09
HIST1H1DP16402 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HIST1H1DP16402 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HIST1H1DP16402 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H1DP16402 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H1DP16402 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST1H1DP16402 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H1DP16402 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H1DP16402 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H1DP16402 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H1DP16402 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H1DP16402 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H1DP16402 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H1DP16402 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST1H1DP16402 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H1DP16402 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
HIST1H1DP16402 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H1DP16402 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.85■■□□□ 1.09
HIST1H1DP16402 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H1DP16402 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.84■■□□□ 1.09
HIST1H1DP16402 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H1DP16402 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST1H1DP16402 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST1H1DP16402 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST1H1DP16402 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.08
HIST1H1DP16402 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1DP16402 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.82■■□□□ 1.08
HIST1H1DP16402 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1DP16402 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1DP16402 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1DP16402 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1DP16402 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1DP16402 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.81■■□□□ 1.08
HIST1H1DP16402 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1DP16402 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1DP16402 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.8■■□□□ 1.08
HIST1H1DP16402 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1DP16402 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HIST1H1DP16402 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.8■■□□□ 1.08
HIST1H1DP16402 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1DP16402 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1DP16402 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1DP16402 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.8■■□□□ 1.08
HIST1H1DP16402 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.8■■□□□ 1.08
HIST1H1DP16402 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST1H1DP16402 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
HIST1H1DP16402 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST1H1DP16402 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.78■■□□□ 1.08
HIST1H1DP16402 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1DP16402 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1DP16402 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1DP16402 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.78■■□□□ 1.08
HIST1H1DP16402 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.78■■□□□ 1.08
HIST1H1DP16402 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1DP16402 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1DP16402 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1DP16402 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HIST1H1DP16402 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1DP16402 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1DP16402 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1DP16402 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HIST1H1DP16402 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
HIST1H1DP16402 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H1DP16402 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.76■■□□□ 1.07
HIST1H1DP16402 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.76■■□□□ 1.07
HIST1H1DP16402 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H1DP16402 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H1DP16402 LINC01003-201ENST00000564834 1764 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms