Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.34■□□□□ 0.53
PAX4O43316 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PAX4O43316 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PAX4O43316 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PAX4O43316 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PAX4O43316 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAX4O43316 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAX4O43316 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAX4O43316 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAX4O43316 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAX4O43316 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PAX4O43316 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAX4O43316 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.3■□□□□ 0.52
PAX4O43316 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PAX4O43316 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAX4O43316 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAX4O43316 RPS2P35-201ENST00000443417 897 ntBASIC18.3■□□□□ 0.52
PAX4O43316 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.3■□□□□ 0.52
PAX4O43316 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PAX4O43316 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAX4O43316 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAX4O43316 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PAX4O43316 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAX4O43316 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAX4O43316 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PAX4O43316 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAX4O43316 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAX4O43316 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
PAX4O43316 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.28■□□□□ 0.52
PAX4O43316 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAX4O43316 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PAX4O43316 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAX4O43316 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.28■□□□□ 0.52
PAX4O43316 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAX4O43316 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAX4O43316 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAX4O43316 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PAX4O43316 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAX4O43316 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PAX4O43316 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PAX4O43316 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.27■□□□□ 0.52
PAX4O43316 MIR6090-201ENST00000622481 60 ntBASIC18.27■□□□□ 0.52
PAX4O43316 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAX4O43316 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAX4O43316 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAX4O43316 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAX4O43316 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.26■□□□□ 0.51
PAX4O43316 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.26■□□□□ 0.51
PAX4O43316 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAX4O43316 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.26■□□□□ 0.51
PAX4O43316 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAX4O43316 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.26■□□□□ 0.51
PAX4O43316 ABCB10P3-201ENST00000561950 2166 ntBASIC18.25■□□□□ 0.51
PAX4O43316 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PAX4O43316 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PAX4O43316 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PAX4O43316 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PAX4O43316 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PAX4O43316 AC127502.1-201ENST00000399971 1502 ntBASIC18.24■□□□□ 0.51
PAX4O43316 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PAX4O43316 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
PAX4O43316 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PAX4O43316 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PAX4O43316 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PAX4O43316 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.23■□□□□ 0.51
PAX4O43316 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAX4O43316 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAX4O43316 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAX4O43316 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.22■□□□□ 0.51
PAX4O43316 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAX4O43316 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PAX4O43316 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PAX4O43316 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.2■□□□□ 0.5
PAX4O43316 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAX4O43316 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAX4O43316 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAX4O43316 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
PAX4O43316 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PAX4O43316 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PAX4O43316 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAX4O43316 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAX4O43316 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PAX4O43316 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.17■□□□□ 0.5
PAX4O43316 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAX4O43316 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PAX4O43316 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAX4O43316 AL139393.2-201ENST00000608721 2025 ntBASIC18.17■□□□□ 0.5
PAX4O43316 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAX4O43316 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.17■□□□□ 0.5
PAX4O43316 AC139426.1-201ENST00000568218 2529 ntBASIC18.17■□□□□ 0.5
PAX4O43316 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAX4O43316 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PAX4O43316 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PAX4O43316 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAX4O43316 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PAX4O43316 DUX4L29-201ENST00000425409 679 ntBASIC18.15■□□□□ 0.5
PAX4O43316 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAX4O43316 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAX4O43316 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAX4O43316 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms