Protein–RNA interactions for Protein: O00291

HIP1, Huntingtin-interacting protein 1, humanhuman

Predictions only

Length 1,037 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1O00291 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
HIP1O00291 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
HIP1O00291 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
HIP1O00291 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
HIP1O00291 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
HIP1O00291 MIR6090-201ENST00000622481 60 ntBASIC31.39■■■□□ 2.62
HIP1O00291 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
HIP1O00291 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
HIP1O00291 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
HIP1O00291 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
HIP1O00291 AP004833.2-201ENST00000532228 1454 ntBASIC31.36■■■□□ 2.61
HIP1O00291 AC044849.2-201ENST00000606596 710 ntBASIC31.36■■■□□ 2.61
HIP1O00291 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
HIP1O00291 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
HIP1O00291 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.35■■■□□ 2.61
HIP1O00291 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
HIP1O00291 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
HIP1O00291 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
HIP1O00291 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
HIP1O00291 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.33■■■□□ 2.61
HIP1O00291 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
HIP1O00291 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
HIP1O00291 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
HIP1O00291 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.3■■■□□ 2.6
HIP1O00291 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.3■■■□□ 2.6
HIP1O00291 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
HIP1O00291 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.29■■■□□ 2.6
HIP1O00291 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.29■■■□□ 2.6
HIP1O00291 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
HIP1O00291 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
HIP1O00291 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.28■■■□□ 2.6
HIP1O00291 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
HIP1O00291 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.27■■■□□ 2.6
HIP1O00291 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
HIP1O00291 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
HIP1O00291 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
HIP1O00291 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.25■■■□□ 2.59
HIP1O00291 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.25■■■□□ 2.59
HIP1O00291 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
HIP1O00291 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HIP1O00291 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HIP1O00291 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
HIP1O00291 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
HIP1O00291 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.23■■■□□ 2.59
HIP1O00291 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
HIP1O00291 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
HIP1O00291 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
HIP1O00291 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
HIP1O00291 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.2■■■□□ 2.59
HIP1O00291 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.2■■■□□ 2.59
HIP1O00291 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
HIP1O00291 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
HIP1O00291 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
HIP1O00291 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
HIP1O00291 RPS2P35-201ENST00000443417 897 ntBASIC31.18■■■□□ 2.58
HIP1O00291 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.18■■■□□ 2.58
HIP1O00291 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.17■■■□□ 2.58
HIP1O00291 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.17■■■□□ 2.58
HIP1O00291 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.17■■■□□ 2.58
HIP1O00291 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
HIP1O00291 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
HIP1O00291 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
HIP1O00291 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.16■■■□□ 2.58
HIP1O00291 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.16■■■□□ 2.58
HIP1O00291 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
HIP1O00291 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
HIP1O00291 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HIP1O00291 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.15■■■□□ 2.58
HIP1O00291 LINC00273-201ENST00000539813 1452 ntBASIC31.14■■■□□ 2.57
HIP1O00291 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HIP1O00291 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HIP1O00291 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.12■■■□□ 2.57
HIP1O00291 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.12■■■□□ 2.57
HIP1O00291 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
HIP1O00291 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HIP1O00291 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
HIP1O00291 AC135983.2-203ENST00000454486 1613 ntBASIC31.09■■■□□ 2.57
HIP1O00291 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
HIP1O00291 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.09■■■□□ 2.57
HIP1O00291 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
HIP1O00291 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HIP1O00291 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HIP1O00291 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
HIP1O00291 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.07■■■□□ 2.56
HIP1O00291 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
HIP1O00291 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
HIP1O00291 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
HIP1O00291 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
HIP1O00291 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
HIP1O00291 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
HIP1O00291 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.05■■■□□ 2.56
HIP1O00291 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
HIP1O00291 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HIP1O00291 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
HIP1O00291 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.05■■■□□ 2.56
HIP1O00291 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
HIP1O00291 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
HIP1O00291 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.04■■■□□ 2.56
HIP1O00291 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
HIP1O00291 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms