Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 TMCO6-211ENST00000513002 542 ntTSL 310.78□□□□□ -0.683e-8■□□□□ 11
PRPF8Q6P2Q9 KHSRP-202ENST00000594496 999 ntTSL 215.79■□□□□ 0.125e-11■□□□□ 11
PRPF8Q6P2Q9 KHSRP-211ENST00000599642 428 ntTSL 215.3■□□□□ 0.045e-11■□□□□ 11
PRPF8Q6P2Q9 KHSRP-212ENST00000600480 851 ntTSL 213.66□□□□□ -0.225e-11■□□□□ 11
PRPF8Q6P2Q9 KHSRP-203ENST00000594745 379 ntTSL 312.76□□□□□ -0.375e-11■□□□□ 11
PRPF8Q6P2Q9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.33□□□□□ -0.123e-7■□□□□ 11
PRPF8Q6P2Q9 GATD1-212ENST00000530209 600 ntTSL 412.17□□□□□ -0.463e-7■□□□□ 11
PRPF8Q6P2Q9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.511e-6■□□□□ 11
PRPF8Q6P2Q9 POLE4-202ENST00000459636 760 ntTSL 316.35■□□□□ 0.211e-6■□□□□ 11
PRPF8Q6P2Q9 POLE4-206ENST00000485527 405 ntTSL 216.29■□□□□ 0.21e-6■□□□□ 11
PRPF8Q6P2Q9 POLE4-201ENST00000233699 602 ntTSL 39.94□□□□□ -0.821e-6■□□□□ 11
PRPF8Q6P2Q9 POLE4-203ENST00000465242 528 ntTSL 25.02□□□□□ -1.611e-6■□□□□ 11
PRPF8Q6P2Q9 POLE4-204ENST00000473023 357 ntTSL 52.88□□□□□ -1.951e-6■□□□□ 11
PRPF8Q6P2Q9 PHGDH-210ENST00000641115 1638 ntBASIC16.11■□□□□ 0.179e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-209ENST00000641074 1780 ntBASIC14.54□□□□□ -0.089e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-232ENST00000641947 1774 nt14.18□□□□□ -0.149e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.57□□□□□ -0.249e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.49□□□□□ -0.259e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-211ENST00000641213 2053 nt13.12□□□□□ -0.319e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.03□□□□□ -0.329e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-216ENST00000641375 2196 nt13.02□□□□□ -0.339e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-229ENST00000641891 2175 nt12.92□□□□□ -0.349e-8■□□□□ 11
PRPF8Q6P2Q9 PHGDH-233ENST00000642021 2794 nt10.38□□□□□ -0.759e-8■□□□□ 11
PRPF8Q6P2Q9 PGLS-206ENST00000600923 651 ntTSL 317.82■□□□□ 0.444e-6■□□□□ 11
PRPF8Q6P2Q9 PGLS-202ENST00000594761 880 ntTSL 517.24■□□□□ 0.354e-6■□□□□ 11
PRPF8Q6P2Q9 PGLS-203ENST00000595782 651 ntTSL 315.42■□□□□ 0.064e-6■□□□□ 11
PRPF8Q6P2Q9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.064e-6■□□□□ 11
PRPF8Q6P2Q9 DCAF11-207ENST00000557810 947 ntTSL 218.44■□□□□ 0.544e-9■□□□□ 11
PRPF8Q6P2Q9 DCAF11-216ENST00000559017 849 ntTSL 513.87□□□□□ -0.194e-9■□□□□ 11
PRPF8Q6P2Q9 DCAF11-237ENST00000561056 577 ntTSL 413.87□□□□□ -0.194e-9■□□□□ 11
PRPF8Q6P2Q9 DCAF11-226ENST00000559796 476 ntTSL 413.68□□□□□ -0.224e-9■□□□□ 11
PRPF8Q6P2Q9 DCAF11-210ENST00000558215 581 ntTSL 411.83□□□□□ -0.514e-9■□□□□ 11
PRPF8Q6P2Q9 DCAF11-206ENST00000557809 568 ntTSL 411.02□□□□□ -0.644e-9■□□□□ 11
PRPF8Q6P2Q9 AC079781.5-203ENST00000641315 2059 nt15.07■□□□□ 05e-11■□□□□ 11
PRPF8Q6P2Q9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.525e-11■□□□□ 11
PRPF8Q6P2Q9 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC8.18□□□□□ -1.15e-11■□□□□ 11
PRPF8Q6P2Q9 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.115e-11■□□□□ 11
PRPF8Q6P2Q9 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.39□□□□□ -1.395e-11■□□□□ 11
PRPF8Q6P2Q9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.49□□□□□ -1.695e-11■□□□□ 11
PRPF8Q6P2Q9 SF3B2-213ENST00000533421 407 ntTSL 310.37□□□□□ -0.751e-6■□□□□ 11
PRPF8Q6P2Q9 DTD1-203ENST00000618693 695 ntTSL 511.82□□□□□ -0.521e-13■□□□□ 11
PRPF8Q6P2Q9 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.621e-13■□□□□ 11
PRPF8Q6P2Q9 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.711e-13■□□□□ 11
PRPF8Q6P2Q9 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC7.98□□□□□ -1.131e-13■□□□□ 11
PRPF8Q6P2Q9 CDC6-202ENST00000473555 584 ntTSL 21.82□□□□□ -2.121e-13■□□□□ 11
PRPF8Q6P2Q9 MVB12B-202ENST00000402437 770 ntTSL 39.06□□□□□ -0.963e-6■□□□□ 11
PRPF8Q6P2Q9 DDB1-211ENST00000538280 227 ntTSL 36.99□□□□□ -1.292e-7■□□□□ 11
PRPF8Q6P2Q9 MMP17-204ENST00000535182 659 ntTSL 213.74□□□□□ -0.217e-10■□□□□ 11
PRPF8Q6P2Q9 MMP17-208ENST00000542142 758 ntTSL 413.11□□□□□ -0.317e-10■□□□□ 11
PRPF8Q6P2Q9 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.66e-7■□□□□ 11
PRPF8Q6P2Q9 SMYD4-203ENST00000491788 3016 ntTSL 210.69□□□□□ -0.76e-7■□□□□ 11
PRPF8Q6P2Q9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.18■□□□□ 0.021e-9■□□□□ 11
PRPF8Q6P2Q9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.31e-9■□□□□ 11
PRPF8Q6P2Q9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.81□□□□□ -0.361e-9■□□□□ 11
PRPF8Q6P2Q9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.09□□□□□ -0.471e-9■□□□□ 11
PRPF8Q6P2Q9 TEAD4-207ENST00000543035 801 ntTSL 522.31■■□□□ 1.166e-7■□□□□ 11
PRPF8Q6P2Q9 CERCAM-203ENST00000411852 1176 ntTSL 522.22■■□□□ 1.155e-8■□□□□ 11
PRPF8Q6P2Q9 CERCAM-212ENST00000493788 901 ntTSL 522.22■■□□□ 1.155e-8■□□□□ 11
PRPF8Q6P2Q9 CERCAM-204ENST00000420034 551 ntTSL 412.19□□□□□ -0.465e-8■□□□□ 11
PRPF8Q6P2Q9 CERCAM-206ENST00000447915 530 ntTSL 510.19□□□□□ -0.785e-8■□□□□ 11
PRPF8Q6P2Q9 PACS2-204ENST00000546915 576 ntTSL 412.39□□□□□ -0.431e-7■□□□□ 11
PRPF8Q6P2Q9 TF-209ENST00000475382 586 ntTSL 47.74□□□□□ -1.173e-17■□□□□ 11
PRPF8Q6P2Q9 TF-214ENST00000498622 719 ntTSL 27.16□□□□□ -1.263e-17■□□□□ 11
PRPF8Q6P2Q9 ERGIC3-212ENST00000465298 505 ntTSL 210.97□□□□□ -0.652e-7■□□□□ 11
PRPF8Q6P2Q9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.96■■□□□ 1.273e-8■□□□□ 11
PRPF8Q6P2Q9 SIGMAR1-204ENST00000461426 939 ntTSL 1 (best)22.39■■□□□ 1.173e-8■□□□□ 11
PRPF8Q6P2Q9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.22■□□□□ 0.833e-8■□□□□ 11
PRPF8Q6P2Q9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.34■□□□□ 0.693e-7■□□□□ 11
PRPF8Q6P2Q9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.613e-8■□□□□ 11
PRPF8Q6P2Q9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.42■□□□□ 0.543e-7■□□□□ 11
PRPF8Q6P2Q9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.69■□□□□ 0.423e-7■□□□□ 11
PRPF8Q6P2Q9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.273e-7■□□□□ 11
PRPF8Q6P2Q9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.69■□□□□ 0.263e-7■□□□□ 11
PRPF8Q6P2Q9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.233e-7■□□□□ 11
PRPF8Q6P2Q9 SIGMAR1-202ENST00000353468 1582 ntTSL 1 (best)16.34■□□□□ 0.213e-8■□□□□ 11
PRPF8Q6P2Q9 SIGMAR1-207ENST00000497006 610 ntTSL 315.06■□□□□ 03e-8■□□□□ 11
PRPF8Q6P2Q9 SIGMAR1-206ENST00000478146 485 ntTSL 212.4□□□□□ -0.423e-8■□□□□ 11
PRPF8Q6P2Q9 TTLL3-208ENST00000426827 756 ntTSL 410.52□□□□□ -0.734e-7■□□□□ 11
PRPF8Q6P2Q9 TTLL3-214ENST00000431204 1041 ntTSL 510.52□□□□□ -0.734e-7■□□□□ 11
PRPF8Q6P2Q9 TTLL3-204ENST00000417065 565 ntTSL 48.84□□□□□ -0.994e-7■□□□□ 11
PRPF8Q6P2Q9 TTLL3-207ENST00000422738 545 ntTSL 48.84□□□□□ -0.994e-7■□□□□ 11
PRPF8Q6P2Q9 TTLL3-222ENST00000459758 555 ntTSL 48.84□□□□□ -0.994e-7■□□□□ 11
PRPF8Q6P2Q9 PDXDC2P-206ENST00000534700 1315 ntBASIC11.59□□□□□ -0.552e-6■□□□□ 11
PRPF8Q6P2Q9 PDXDC2P-NPIPB14P-203ENST00000529089 1580 ntTSL 29.8□□□□□ -0.842e-6■□□□□ 11
PRPF8Q6P2Q9 NOSTRIN-205ENST00000439509 584 ntTSL 36.82□□□□□ -1.322e-6■□□□□ 11
PRPF8Q6P2Q9 HDAC10-217ENST00000496235 885 ntTSL 517.22■□□□□ 0.357e-8■□□□□ 11
PRPF8Q6P2Q9 OTX1-206ENST00000484066 1244 ntTSL 316.8■□□□□ 0.282e-6■□□□□ 11
PRPF8Q6P2Q9 OTX1-203ENST00000405984 1694 ntTSL 213.96□□□□□ -0.172e-6■□□□□ 11
PRPF8Q6P2Q9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.52e-6■□□□□ 11
PRPF8Q6P2Q9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.52e-6■□□□□ 11
PRPF8Q6P2Q9 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC11.56□□□□□ -0.565e-8■□□□□ 11
PRPF8Q6P2Q9 MVB12A-202ENST00000524382 908 ntTSL 217.01■□□□□ 0.316e-7■□□□□ 11
PRPF8Q6P2Q9 MVB12A-213ENST00000594784 705 ntTSL 516.38■□□□□ 0.216e-7■□□□□ 11
PRPF8Q6P2Q9 PRMT1-210ENST00000528126 642 ntTSL 213.44□□□□□ -0.268e-7■□□□□ 11
PRPF8Q6P2Q9 CCDC137-203ENST00000572531 265 ntTSL 39.89□□□□□ -0.832e-6■□□□□ 11
PRPF8Q6P2Q9 ADAM15-212ENST00000462116 429 ntTSL 510.72□□□□□ -0.695e-6■□□□□ 11
PRPF8Q6P2Q9 MIB2-212ENST00000486072 568 ntTSL 318.58■□□□□ 0.571e-11■□□□□ 11
PRPF8Q6P2Q9 MIB2-222ENST00000507229 2582 ntTSL 214.68□□□□□ -0.062e-11■□□□□ 11
PRPF8Q6P2Q9 OAZ1-206ENST00000589739 657 ntTSL 214.84□□□□□ -0.037e-9■□□□□ 11
PRPF8Q6P2Q9 NARFL-214ENST00000566650 2818 ntTSL 211.31□□□□□ -0.61e-6■□□□□ 11
Retrieved 100 of 73,762 protein–RNA pairs in 780.6 ms