RNA–Protein interactions for RNA: ENST00000497006.1

SIGMAR1-207, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 3

Gene SIGMAR1, Length 610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-207ENST00000497006 NISCHQ9Y2I1 1504 aa43.2■■■■■ 4.51
SIGMAR1-207ENST00000497006 CCDC180Q9P1Z9 1646 aa38.58■■■■□ 3.77
SIGMAR1-207ENST00000497006 ABCC9O60706 1549 aa37.69■■■■□ 3.62
SIGMAR1-207ENST00000497006 RB1CC1Q8TDY2 1594 aa36.33■■■■□ 3.41
SIGMAR1-207ENST00000497006 NACADO15069 1562 aa36.27■■■■□ 3.4
SIGMAR1-207ENST00000497006 MYO15BQ96JP2 1530 aa36.06■■■■□ 3.36
SIGMAR1-207ENST00000497006 DCAF8L2P0C7V8 631 aa35.99■■■■□ 3.35
SIGMAR1-207ENST00000497006 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
SIGMAR1-207ENST00000497006 DCAF1Q9Y4B6 1507 aa35.83■■■■□ 3.33
SIGMAR1-207ENST00000497006 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
SIGMAR1-207ENST00000497006 BICRAQ9NZM4 1560 aa35.15■■■■□ 3.22
SIGMAR1-207ENST00000497006 PABPN1Q86U42 306 aaKnown RBP eCLIP35.12■■■■□ 3.21
SIGMAR1-207ENST00000497006 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
SIGMAR1-207ENST00000497006 SHROOM4Q9ULL8 1493 aa34.97■■■■□ 3.19
SIGMAR1-207ENST00000497006 DNAJC5BQ9UF47 199 aa34.58■■■■□ 3.13
SIGMAR1-207ENST00000497006 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
SIGMAR1-207ENST00000497006 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
SIGMAR1-207ENST00000497006 CECR2Q9BXF3 1484 aa33.93■■■■□ 3.02
SIGMAR1-207ENST00000497006 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
SIGMAR1-207ENST00000497006 BAZ1AQ9NRL2 1556 aaPredicted RBP33.55■■■□□ 2.96
SIGMAR1-207ENST00000497006 SMARCA2P51531 1590 aa33.43■■■□□ 2.94
SIGMAR1-207ENST00000497006 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
SIGMAR1-207ENST00000497006 ATAD2BQ9ULI0 1458 aa33.38■■■□□ 2.93
SIGMAR1-207ENST00000497006 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
SIGMAR1-207ENST00000497006 PEG3Q9GZU2 1588 aa33.29■■■□□ 2.92
SIGMAR1-207ENST00000497006 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
SIGMAR1-207ENST00000497006 BAZ1BQ9UIG0 1483 aaKnown RBP33.14■■■□□ 2.9
SIGMAR1-207ENST00000497006 WIZO95785 1651 aa32.88■■■□□ 2.85
SIGMAR1-207ENST00000497006 RSF1Q96T23 1441 aaPredicted RBP32.82■■■□□ 2.84
SIGMAR1-207ENST00000497006 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
SIGMAR1-207ENST00000497006 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
SIGMAR1-207ENST00000497006 ERCC6Q03468 1493 aa32.58■■■□□ 2.81
SIGMAR1-207ENST00000497006 NESP48681 1621 aa32.55■■■□□ 2.8
SIGMAR1-207ENST00000497006 CADPSQ9ULU8 1353 aa32.41■■■□□ 2.78
SIGMAR1-207ENST00000497006 PDS5BQ9NTI5 1447 aa32.37■■■□□ 2.77
SIGMAR1-207ENST00000497006 CUX2O14529 1486 aa32.33■■■□□ 2.77
SIGMAR1-207ENST00000497006 KIF21AQ7Z4S6 1674 aa32.24■■■□□ 2.75
SIGMAR1-207ENST00000497006 CFTRP13569 1480 aa32.22■■■□□ 2.75
SIGMAR1-207ENST00000497006 THOC2Q8NI27 1593 aaKnown RBP32.19■■■□□ 2.74
SIGMAR1-207ENST00000497006 CCDC88BA6NC98 1476 aa32.14■■■□□ 2.74
SIGMAR1-207ENST00000497006 CEP164Q9UPV0 1460 aa32.06■■■□□ 2.72
SIGMAR1-207ENST00000497006 PRDM2Q13029 1718 aa32.05■■■□□ 2.72
SIGMAR1-207ENST00000497006 FANCD2Q9BXW9 1451 aa32.04■■■□□ 2.72
SIGMAR1-207ENST00000497006 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
SIGMAR1-207ENST00000497006 WDR62O43379 1518 aa31.95■■■□□ 2.7
SIGMAR1-207ENST00000497006 SUPT5HO00267 1087 aaKnown RBP31.89■■■□□ 2.7
SIGMAR1-207ENST00000497006 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.67
SIGMAR1-207ENST00000497006 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
SIGMAR1-207ENST00000497006 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
SIGMAR1-207ENST00000497006 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.64
SIGMAR1-207ENST00000497006 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
SIGMAR1-207ENST00000497006 DNAJC5Q9H3Z4 198 aa31.36■■■□□ 2.61
SIGMAR1-207ENST00000497006 POLA1P09884 1462 aaPredicted RBP31.24■■■□□ 2.59
SIGMAR1-207ENST00000497006 CUX1P39880 1505 aa31.21■■■□□ 2.59
SIGMAR1-207ENST00000497006 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.58
SIGMAR1-207ENST00000497006 ZNF608Q9ULD9 1512 aaPredicted RBP31.16■■■□□ 2.58
SIGMAR1-207ENST00000497006 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.58
SIGMAR1-207ENST00000497006 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
SIGMAR1-207ENST00000497006 SOGA1O94964 1423 aa31.09■■■□□ 2.57
SIGMAR1-207ENST00000497006 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
SIGMAR1-207ENST00000497006 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
SIGMAR1-207ENST00000497006 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
SIGMAR1-207ENST00000497006 BIVM-ERCC5R4GMW8 1640 aa30.98■■■□□ 2.55
SIGMAR1-207ENST00000497006 TOP2BQ02880 1626 aa30.97■■■□□ 2.55
SIGMAR1-207ENST00000497006 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.552e-8■■■■■ 30.3
SIGMAR1-207ENST00000497006 SYNJ1O43426 1573 aa30.89■■■□□ 2.54
SIGMAR1-207ENST00000497006 OSCARQ8IYS5 282 aa30.88■■■□□ 2.53
SIGMAR1-207ENST00000497006 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
SIGMAR1-207ENST00000497006 ABCA10Q8WWZ4 1543 aa30.87■■■□□ 2.53
SIGMAR1-207ENST00000497006 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
SIGMAR1-207ENST00000497006 ABCA5Q8WWZ7 1642 aa30.76■■■□□ 2.52
SIGMAR1-207ENST00000497006 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.52
SIGMAR1-207ENST00000497006 GAPVD1Q14C86 1478 aa30.76■■■□□ 2.51
SIGMAR1-207ENST00000497006 CHD1O14646 1710 aa30.74■■■□□ 2.51
SIGMAR1-207ENST00000497006 SNAPC4Q5SXM2 1469 aa30.74■■■□□ 2.51
SIGMAR1-207ENST00000497006 PBRM1Q86U86 1689 aa30.74■■■□□ 2.51
SIGMAR1-207ENST00000497006 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
SIGMAR1-207ENST00000497006 FBLN2P98095 1184 aa30.6■■■□□ 2.49
SIGMAR1-207ENST00000497006 CHMP7Q8WUX9 453 aaPredicted RBP30.55■■■□□ 2.48
SIGMAR1-207ENST00000497006 ERICH3Q5RHP9 1530 aa30.53■■■□□ 2.48
SIGMAR1-207ENST00000497006 ADAMTS12P58397 1594 aa30.49■■■□□ 2.47
SIGMAR1-207ENST00000497006 FHAD1B1AJZ9 1412 aa30.42■■■□□ 2.46
SIGMAR1-207ENST00000497006 RIMBP3CA6NJZ7 1639 aa30.42■■■□□ 2.46
SIGMAR1-207ENST00000497006 RIMBP3BA6NNM3 1639 aa30.42■■■□□ 2.46
SIGMAR1-207ENST00000497006 RIMBP3Q9UFD9 1639 aa30.42■■■□□ 2.46
SIGMAR1-207ENST00000497006 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
SIGMAR1-207ENST00000497006 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
SIGMAR1-207ENST00000497006 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
SIGMAR1-207ENST00000497006 KIF27Q86VH2 1401 aa30.39■■■□□ 2.45
SIGMAR1-207ENST00000497006 NUP160Q12769 1436 aa30.26■■■□□ 2.43
SIGMAR1-207ENST00000497006 CUL7Q14999 1698 aa30.26■■■□□ 2.43
SIGMAR1-207ENST00000497006 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
SIGMAR1-207ENST00000497006 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
SIGMAR1-207ENST00000497006 IGF1RP08069 1367 aa30.18■■■□□ 2.42
SIGMAR1-207ENST00000497006 ARAP1Q96P48 1450 aa30.13■■■□□ 2.41
SIGMAR1-207ENST00000497006 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
SIGMAR1-207ENST00000497006 CYB5RLQ6IPT4 315 aa30.04■■■□□ 2.4
SIGMAR1-207ENST00000497006 RUSC2Q8N2Y8 1516 aa30.04■■■□□ 2.4
SIGMAR1-207ENST00000497006 CARMIL1Q5VZK9 1371 aa30.03■■■□□ 2.4
SIGMAR1-207ENST00000497006 KIAA0586Q9BVV6 1533 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms