RNA–Protein interactions for RNA: ENST00000473555.1

CDC6-202, Transcript of cell division cycle 6, humanhuman

TSL 2

Gene CDC6, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-202ENST00000473555 AEBP2Q6ZN18 517 aaPredicted RBP27.93■■■□□ 2.06
CDC6-202ENST00000473555 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
CDC6-202ENST00000473555 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
CDC6-202ENST00000473555 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
CDC6-202ENST00000473555 FOXD1Q16676 465 aa22.22■■□□□ 1.15
CDC6-202ENST00000473555 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
CDC6-202ENST00000473555 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
CDC6-202ENST00000473555 MSH5O43196 834 aa20.87■□□□□ 0.93
CDC6-202ENST00000473555 PIAS4Q8N2W9 510 aaPredicted RBP20.81■□□□□ 0.92
CDC6-202ENST00000473555 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
CDC6-202ENST00000473555 ADRA2BP18089 450 aa20.7■□□□□ 0.9
CDC6-202ENST00000473555 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
CDC6-202ENST00000473555 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
CDC6-202ENST00000473555 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
CDC6-202ENST00000473555 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
CDC6-202ENST00000473555 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
CDC6-202ENST00000473555 HOXD11P31277 338 aaPredicted RBP18.23■□□□□ 0.51
CDC6-202ENST00000473555 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
CDC6-202ENST00000473555 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
CDC6-202ENST00000473555 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
CDC6-202ENST00000473555 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
CDC6-202ENST00000473555 RNF39Q9H2S5 420 aa17.77■□□□□ 0.44
CDC6-202ENST00000473555 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
CDC6-202ENST00000473555 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
CDC6-202ENST00000473555 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
CDC6-202ENST00000473555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.381e-8■■■■■ 27.4
CDC6-202ENST00000473555 KCNA4P22459 653 aa17.26■□□□□ 0.35
CDC6-202ENST00000473555 U3KPZ7 1027 aaPredicted RBP17■□□□□ 0.31
CDC6-202ENST00000473555 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
CDC6-202ENST00000473555 CAPN15O75808 1086 aa16.76■□□□□ 0.27
CDC6-202ENST00000473555 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
CDC6-202ENST00000473555 DSG3P32926 999 aa16.63■□□□□ 0.25
CDC6-202ENST00000473555 APLP2Q06481 763 aa16.63■□□□□ 0.25
CDC6-202ENST00000473555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
CDC6-202ENST00000473555 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
CDC6-202ENST00000473555 ZNF219Q9P2Y4 722 aaPredicted RBP16.49■□□□□ 0.23
CDC6-202ENST00000473555 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
CDC6-202ENST00000473555 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
CDC6-202ENST00000473555 ABCB7O75027 752 aa16.34■□□□□ 0.21
CDC6-202ENST00000473555 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
CDC6-202ENST00000473555 POTEHQ6S545 545 aa16.34■□□□□ 0.21
CDC6-202ENST00000473555 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
CDC6-202ENST00000473555 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
CDC6-202ENST00000473555 POLA2Q14181 598 aa16.02■□□□□ 0.16
CDC6-202ENST00000473555 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
CDC6-202ENST00000473555 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
CDC6-202ENST00000473555 ZBTB22O15209 634 aa15.84■□□□□ 0.13
CDC6-202ENST00000473555 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
CDC6-202ENST00000473555 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
CDC6-202ENST00000473555 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
CDC6-202ENST00000473555 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
CDC6-202ENST00000473555 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
CDC6-202ENST00000473555 REM2Q8IYK8 340 aaPredicted RBP15.37■□□□□ 0.05
CDC6-202ENST00000473555 FBLN2P98095 1184 aa15.36■□□□□ 0.05
CDC6-202ENST00000473555 SPDYE2BA6NHP3 402 aa15.25■□□□□ 0.03
CDC6-202ENST00000473555 SPDYE6P0CI01 402 aa15.25■□□□□ 0.03
CDC6-202ENST00000473555 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
CDC6-202ENST00000473555 PITPNM1O00562 1244 aa15.2■□□□□ 0.02
CDC6-202ENST00000473555 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
CDC6-202ENST00000473555 PIP4P2Q8N4L2 257 aa15.16■□□□□ 0.02
CDC6-202ENST00000473555 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
CDC6-202ENST00000473555 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
CDC6-202ENST00000473555 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
CDC6-202ENST00000473555 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
CDC6-202ENST00000473555 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
CDC6-202ENST00000473555 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
CDC6-202ENST00000473555 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
CDC6-202ENST00000473555 CLEC11AQ9Y240 323 aa14.94□□□□□ -0.02
CDC6-202ENST00000473555 HAX1O00165 279 aa14.91□□□□□ -0.02
CDC6-202ENST00000473555 PRKAR2AP13861 404 aaKnown RBP14.82□□□□□ -0.04
CDC6-202ENST00000473555 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDC6-202ENST00000473555 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
CDC6-202ENST00000473555 EVX2Q03828 476 aa14.65□□□□□ -0.06
CDC6-202ENST00000473555 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
CDC6-202ENST00000473555 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
CDC6-202ENST00000473555 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
CDC6-202ENST00000473555 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
CDC6-202ENST00000473555 FARP1Q9Y4F1 1045 aaPredicted RBP14.43□□□□□ -0.1
CDC6-202ENST00000473555 GABBR2O75899 941 aa14.37□□□□□ -0.11
CDC6-202ENST00000473555 CD44P16070 742 aaKnown RBP14.36□□□□□ -0.11
CDC6-202ENST00000473555 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
CDC6-202ENST00000473555 CLCN6P51797 869 aa14.21□□□□□ -0.13
CDC6-202ENST00000473555 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
CDC6-202ENST00000473555 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
CDC6-202ENST00000473555 PROM2Q8N271 834 aa14.11□□□□□ -0.15
CDC6-202ENST00000473555 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDC6-202ENST00000473555 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
CDC6-202ENST00000473555 POTEIP0CG38 1075 aa14.04□□□□□ -0.16
CDC6-202ENST00000473555 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
CDC6-202ENST00000473555 LHX8Q68G74 356 aa14.02□□□□□ -0.17
CDC6-202ENST00000473555 DCBLD2Q96PD2 775 aa14.02□□□□□ -0.17
CDC6-202ENST00000473555 GALR2O43603 387 aaPredicted RBP13.94□□□□□ -0.18
CDC6-202ENST00000473555 PHF12Q96QT6 1004 aa13.93□□□□□ -0.18
CDC6-202ENST00000473555 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
CDC6-202ENST00000473555 MIER1Q8N108 512 aa13.84□□□□□ -0.19
CDC6-202ENST00000473555 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
CDC6-202ENST00000473555 MS4A3Q96HJ5 214 aa13.76□□□□□ -0.21
CDC6-202ENST00000473555 FKBP8Q14318 412 aa13.75□□□□□ -0.21
CDC6-202ENST00000473555 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
CDC6-202ENST00000473555 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms