RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 NISCHQ9Y2I1 1504 aa31.33■■■□□ 2.61
ERGIC3-212ENST00000465298 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
ERGIC3-212ENST00000465298 ABCC9O60706 1549 aa26.89■■□□□ 1.89
ERGIC3-212ENST00000465298 ZCCHC6Q5VYS8 1495 aaKnown RBP26.13■■□□□ 1.77
ERGIC3-212ENST00000465298 DCAF8L2P0C7V8 631 aa26.13■■□□□ 1.77
ERGIC3-212ENST00000465298 NACADO15069 1562 aa26.12■■□□□ 1.77
ERGIC3-212ENST00000465298 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
ERGIC3-212ENST00000465298 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
ERGIC3-212ENST00000465298 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
ERGIC3-212ENST00000465298 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
ERGIC3-212ENST00000465298 UNC13AQ9UPW8 1703 aa25.22■■□□□ 1.63
ERGIC3-212ENST00000465298 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
ERGIC3-212ENST00000465298 PABPN1Q86U42 306 aaKnown RBP eCLIP25.16■■□□□ 1.62
ERGIC3-212ENST00000465298 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
ERGIC3-212ENST00000465298 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
ERGIC3-212ENST00000465298 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
ERGIC3-212ENST00000465298 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.48
ERGIC3-212ENST00000465298 CC2D2AQ9P2K1 1620 aa24.32■■□□□ 1.48
ERGIC3-212ENST00000465298 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
ERGIC3-212ENST00000465298 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
ERGIC3-212ENST00000465298 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
ERGIC3-212ENST00000465298 NCAPD3P42695 1498 aa24.1■■□□□ 1.45
ERGIC3-212ENST00000465298 ATAD2BQ9ULI0 1458 aa24.08■■□□□ 1.45
ERGIC3-212ENST00000465298 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
ERGIC3-212ENST00000465298 PEG3Q9GZU2 1588 aa24.05■■□□□ 1.44
ERGIC3-212ENST00000465298 HMGXB3Q12766 1538 aa23.98■■□□□ 1.43
ERGIC3-212ENST00000465298 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
ERGIC3-212ENST00000465298 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
ERGIC3-212ENST00000465298 WIZO95785 1651 aa23.76■■□□□ 1.39
ERGIC3-212ENST00000465298 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
ERGIC3-212ENST00000465298 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
ERGIC3-212ENST00000465298 CADPSQ9ULU8 1353 aa23.42■■□□□ 1.34
ERGIC3-212ENST00000465298 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
ERGIC3-212ENST00000465298 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
ERGIC3-212ENST00000465298 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
ERGIC3-212ENST00000465298 CFTRP13569 1480 aa23.3■■□□□ 1.32
ERGIC3-212ENST00000465298 ERCC6Q03468 1493 aa23.29■■□□□ 1.32
ERGIC3-212ENST00000465298 NESP48681 1621 aa23.26■■□□□ 1.31
ERGIC3-212ENST00000465298 FANCD2Q9BXW9 1451 aa23.1■■□□□ 1.29
ERGIC3-212ENST00000465298 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
ERGIC3-212ENST00000465298 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
ERGIC3-212ENST00000465298 CUX2O14529 1486 aa22.99■■□□□ 1.27
ERGIC3-212ENST00000465298 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
ERGIC3-212ENST00000465298 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
ERGIC3-212ENST00000465298 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
ERGIC3-212ENST00000465298 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
ERGIC3-212ENST00000465298 WDR62O43379 1518 aa22.87■■□□□ 1.25
ERGIC3-212ENST00000465298 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
ERGIC3-212ENST00000465298 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
ERGIC3-212ENST00000465298 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
ERGIC3-212ENST00000465298 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.21
ERGIC3-212ENST00000465298 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
ERGIC3-212ENST00000465298 CUX1P39880 1505 aa22.57■■□□□ 1.2
ERGIC3-212ENST00000465298 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
ERGIC3-212ENST00000465298 SOGA1O94964 1423 aa22.52■■□□□ 1.2
ERGIC3-212ENST00000465298 FGD5Q6ZNL6 1462 aa22.51■■□□□ 1.19
ERGIC3-212ENST00000465298 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
ERGIC3-212ENST00000465298 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
ERGIC3-212ENST00000465298 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
ERGIC3-212ENST00000465298 TARBP1Q13395 1621 aaKnown RBP22.4■■□□□ 1.18
ERGIC3-212ENST00000465298 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
ERGIC3-212ENST00000465298 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
ERGIC3-212ENST00000465298 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
ERGIC3-212ENST00000465298 ZNF608Q9ULD9 1512 aaPredicted RBP22.32■■□□□ 1.16
ERGIC3-212ENST00000465298 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
ERGIC3-212ENST00000465298 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
ERGIC3-212ENST00000465298 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.163e-7■■■■■ 29.5
ERGIC3-212ENST00000465298 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
ERGIC3-212ENST00000465298 GRIN2BQ13224 1484 aa22.25■■□□□ 1.15
ERGIC3-212ENST00000465298 GAPVD1Q14C86 1478 aa22.25■■□□□ 1.15
ERGIC3-212ENST00000465298 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
ERGIC3-212ENST00000465298 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
ERGIC3-212ENST00000465298 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
ERGIC3-212ENST00000465298 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
ERGIC3-212ENST00000465298 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
ERGIC3-212ENST00000465298 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
ERGIC3-212ENST00000465298 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
ERGIC3-212ENST00000465298 FBLN2P98095 1184 aa22.07■■□□□ 1.12
ERGIC3-212ENST00000465298 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
ERGIC3-212ENST00000465298 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
ERGIC3-212ENST00000465298 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
ERGIC3-212ENST00000465298 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
ERGIC3-212ENST00000465298 IGF1RP08069 1367 aa22■■□□□ 1.11
ERGIC3-212ENST00000465298 DNAJC5Q9H3Z4 198 aa22■■□□□ 1.11
ERGIC3-212ENST00000465298 EEA1Q15075 1411 aa21.99■■□□□ 1.11
ERGIC3-212ENST00000465298 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
ERGIC3-212ENST00000465298 CUL7Q14999 1698 aa21.94■■□□□ 1.1
ERGIC3-212ENST00000465298 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
ERGIC3-212ENST00000465298 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
ERGIC3-212ENST00000465298 CHD1O14646 1710 aa21.88■■□□□ 1.09
ERGIC3-212ENST00000465298 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
ERGIC3-212ENST00000465298 NUP160Q12769 1436 aa21.81■■□□□ 1.08
ERGIC3-212ENST00000465298 RAPGEF2Q9Y4G8 1499 aa21.81■■□□□ 1.08
ERGIC3-212ENST00000465298 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
ERGIC3-212ENST00000465298 PRXQ9BXM0 1461 aa21.74■■□□□ 1.07
ERGIC3-212ENST00000465298 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
ERGIC3-212ENST00000465298 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
ERGIC3-212ENST00000465298 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
ERGIC3-212ENST00000465298 FAM9AQ8IZU1 332 aaPredicted RBP21.68■■□□□ 1.06
ERGIC3-212ENST00000465298 JPH4Q96JJ6 628 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms