RNA–Protein interactions for RNA: ENST00000524382.1

MVB12A-202, Transcript of multivesicular body subunit 12A, humanhuman

TSL 2

Gene MVB12A, Length 908 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-202ENST00000524382 NISCHQ9Y2I1 1504 aa48.43■■■■■ 5.34
MVB12A-202ENST00000524382 ABCC9O60706 1549 aa44.75■■■■■ 4.76
MVB12A-202ENST00000524382 CCDC180Q9P1Z9 1646 aa43.92■■■■■ 4.62
MVB12A-202ENST00000524382 DNAJC5BQ9UF47 199 aa42.78■■■■■ 4.44
MVB12A-202ENST00000524382 RB1CC1Q8TDY2 1594 aa42.26■■■■■ 4.36
MVB12A-202ENST00000524382 NACADO15069 1562 aa41.74■■■■■ 4.27
MVB12A-202ENST00000524382 PABPN1Q86U42 306 aaKnown RBP eCLIP41.49■■■■■ 4.23
MVB12A-202ENST00000524382 UNC13AQ9UPW8 1703 aa41.27■■■■■ 4.2
MVB12A-202ENST00000524382 DCAF8L2P0C7V8 631 aa41.24■■■■■ 4.19
MVB12A-202ENST00000524382 BICRAQ9NZM4 1560 aa41.01■■■■■ 4.16
MVB12A-202ENST00000524382 MYO15BQ96JP2 1530 aa40.88■■■■■ 4.13
MVB12A-202ENST00000524382 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
MVB12A-202ENST00000524382 SHROOM4Q9ULL8 1493 aa40.45■■■■■ 4.07
MVB12A-202ENST00000524382 CC2D2AQ9P2K1 1620 aa40.42■■■■■ 4.06
MVB12A-202ENST00000524382 EIF4G1Q04637 1599 aaKnown RBP40.1■■■■■ 4.01
MVB12A-202ENST00000524382 DNAJC5Q9H3Z4 198 aa40.04■■■■■ 4
MVB12A-202ENST00000524382 DCAF1Q9Y4B6 1507 aa39.99■■■■□ 3.99
MVB12A-202ENST00000524382 ZCCHC6Q5VYS8 1495 aaKnown RBP39.94■■■■□ 3.98
MVB12A-202ENST00000524382 SCRIBQ14160 1630 aa39.89■■■■□ 3.98
MVB12A-202ENST00000524382 CUX2O14529 1486 aa39.03■■■■□ 3.84
MVB12A-202ENST00000524382 ERCC6Q03468 1493 aa38.74■■■■□ 3.79
MVB12A-202ENST00000524382 NCAPD3P42695 1498 aa38.53■■■■□ 3.76
MVB12A-202ENST00000524382 ATAD2BQ9ULI0 1458 aa38.25■■■■□ 3.71
MVB12A-202ENST00000524382 NESP48681 1621 aa38.16■■■■□ 3.7
MVB12A-202ENST00000524382 HMGXB3Q12766 1538 aa38.16■■■■□ 3.7
MVB12A-202ENST00000524382 SMARCA2P51531 1590 aa38.13■■■■□ 3.69
MVB12A-202ENST00000524382 THOC2Q8NI27 1593 aaKnown RBP38.02■■■■□ 3.68
MVB12A-202ENST00000524382 SMARCA4P51532 1647 aa37.98■■■■□ 3.67
MVB12A-202ENST00000524382 TRIM41Q8WV44 630 aa37.86■■■■□ 3.65
MVB12A-202ENST00000524382 BAZ1BQ9UIG0 1483 aaKnown RBP37.84■■■■□ 3.65
MVB12A-202ENST00000524382 LAMC3Q9Y6N6 1575 aa37.83■■■■□ 3.65
MVB12A-202ENST00000524382 BAZ1AQ9NRL2 1556 aaPredicted RBP37.68■■■■□ 3.62
MVB12A-202ENST00000524382 KIF21AQ7Z4S6 1674 aa37.68■■■■□ 3.62
MVB12A-202ENST00000524382 PEG3Q9GZU2 1588 aa37.65■■■■□ 3.62
MVB12A-202ENST00000524382 PDS5BQ9NTI5 1447 aa37.64■■■■□ 3.62
MVB12A-202ENST00000524382 MRC2Q9UBG0 1479 aa37.34■■■■□ 3.57
MVB12A-202ENST00000524382 WDR62O43379 1518 aa37.3■■■■□ 3.56
MVB12A-202ENST00000524382 CADPSQ9ULU8 1353 aa37.29■■■■□ 3.56
MVB12A-202ENST00000524382 MROH2BQ7Z745 1585 aa37.28■■■■□ 3.56
MVB12A-202ENST00000524382 OSCARQ8IYS5 282 aa37.06■■■■□ 3.52
MVB12A-202ENST00000524382 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.52
MVB12A-202ENST00000524382 FANCD2Q9BXW9 1451 aa36.88■■■■□ 3.49
MVB12A-202ENST00000524382 WIZO95785 1651 aa36.8■■■■□ 3.48
MVB12A-202ENST00000524382 RIMBP3CA6NJZ7 1639 aa36.68■■■■□ 3.46
MVB12A-202ENST00000524382 RIMBP3BA6NNM3 1639 aa36.68■■■■□ 3.46
MVB12A-202ENST00000524382 RIMBP3Q9UFD9 1639 aa36.68■■■■□ 3.46
MVB12A-202ENST00000524382 CFTRP13569 1480 aa36.68■■■■□ 3.46
MVB12A-202ENST00000524382 URB2Q14146 1524 aaKnown RBP36.61■■■■□ 3.45
MVB12A-202ENST00000524382 ARHGEF11O15085 1522 aa36.46■■■■□ 3.43
MVB12A-202ENST00000524382 IFT140Q96RY7 1462 aa36.31■■■■□ 3.4
MVB12A-202ENST00000524382 ZNF608Q9ULD9 1512 aaPredicted RBP36.3■■■■□ 3.4
MVB12A-202ENST00000524382 TOP2AP11388 1531 aaKnown RBP36.29■■■■□ 3.4
MVB12A-202ENST00000524382 PRDM2Q13029 1718 aa36.28■■■■□ 3.4
MVB12A-202ENST00000524382 CYB5RLQ6IPT4 315 aa36.23■■■■□ 3.39
MVB12A-202ENST00000524382 RSF1Q96T23 1441 aaPredicted RBP36.17■■■■□ 3.38
MVB12A-202ENST00000524382 TRHP20396 242 aaPredicted RBP36.15■■■■□ 3.38
MVB12A-202ENST00000524382 EIF4G3O43432 1585 aaKnown RBP36.09■■■■□ 3.37
MVB12A-202ENST00000524382 TOPBP1Q92547 1522 aa36.07■■■■□ 3.36
MVB12A-202ENST00000524382 ARAP1Q96P48 1450 aa36.03■■■■□ 3.36
MVB12A-202ENST00000524382 CHD1O14646 1710 aa36■■■■□ 3.35
MVB12A-202ENST00000524382 ABCC8Q09428 1581 aa35.98■■■■□ 3.35
MVB12A-202ENST00000524382 DNMBPQ6XZF7 1577 aa35.87■■■■□ 3.33
MVB12A-202ENST00000524382 CCDC88BA6NC98 1476 aa35.86■■■■□ 3.33
MVB12A-202ENST00000524382 AQRO60306 1485 aaKnown RBP eCLIP35.86■■■■□ 3.337e-8■■■■□ 23.6
MVB12A-202ENST00000524382 TARBP1Q13395 1621 aaKnown RBP35.83■■■■□ 3.33
MVB12A-202ENST00000524382 FBLN2P98095 1184 aa35.82■■■■□ 3.32
MVB12A-202ENST00000524382 AEBP2Q6ZN18 517 aaPredicted RBP35.82■■■■□ 3.32
MVB12A-202ENST00000524382 POLA1P09884 1462 aaPredicted RBP35.63■■■■□ 3.29
MVB12A-202ENST00000524382 CLASP1Q7Z460 1538 aa35.57■■■■□ 3.28
MVB12A-202ENST00000524382 RAD54L2Q9Y4B4 1467 aa35.49■■■■□ 3.27
MVB12A-202ENST00000524382 SYNJ1O43426 1573 aa35.49■■■■□ 3.27
MVB12A-202ENST00000524382 TDRD9Q8NDG6 1382 aaKnown RBP35.49■■■■□ 3.27
MVB12A-202ENST00000524382 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
MVB12A-202ENST00000524382 SOGA1O94964 1423 aa35.47■■■■□ 3.27
MVB12A-202ENST00000524382 WDR97A6NE52 1622 aa35.46■■■■□ 3.27
MVB12A-202ENST00000524382 CHMP7Q8WUX9 453 aaPredicted RBP35.43■■■■□ 3.26
MVB12A-202ENST00000524382 MAGI1Q96QZ7 1491 aaPredicted RBP35.39■■■■□ 3.26
MVB12A-202ENST00000524382 SYNJ2O15056 1496 aa35.28■■■■□ 3.24
MVB12A-202ENST00000524382 GRIN2BQ13224 1484 aa35.28■■■■□ 3.24
MVB12A-202ENST00000524382 FGD5Q6ZNL6 1462 aa35.27■■■■□ 3.24
MVB12A-202ENST00000524382 GAPVD1Q14C86 1478 aa35.25■■■■□ 3.23
MVB12A-202ENST00000524382 CUX1P39880 1505 aa35.08■■■■□ 3.21
MVB12A-202ENST00000524382 PBRM1Q86U86 1689 aa35.08■■■■□ 3.21
MVB12A-202ENST00000524382 ERCC6L2Q5T890 1561 aa34.9■■■■□ 3.18
MVB12A-202ENST00000524382 ABCA5Q8WWZ7 1642 aa34.88■■■■□ 3.17
MVB12A-202ENST00000524382 ABCA10Q8WWZ4 1543 aa34.84■■■■□ 3.17
MVB12A-202ENST00000524382 GRIN2AQ12879 1464 aa34.81■■■■□ 3.16
MVB12A-202ENST00000524382 CEP170Q5SW79 1584 aa34.8■■■■□ 3.16
MVB12A-202ENST00000524382 KIF13AQ9H1H9 1805 aa34.76■■■■□ 3.15
MVB12A-202ENST00000524382 NUP160Q12769 1436 aa34.73■■■■□ 3.15
MVB12A-202ENST00000524382 SHROOM2Q13796 1616 aa34.7■■■■□ 3.15
MVB12A-202ENST00000524382 ADAMTS12P58397 1594 aa34.67■■■■□ 3.14
MVB12A-202ENST00000524382 FHAD1B1AJZ9 1412 aa34.55■■■■□ 3.12
MVB12A-202ENST00000524382 WRNQ14191 1432 aaPredicted RBP eCLIP34.52■■■■□ 3.129e-6■■■■■ 50.1
MVB12A-202ENST00000524382 ABCC10Q5T3U5 1492 aa34.47■■■■□ 3.11
MVB12A-202ENST00000524382 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
MVB12A-202ENST00000524382 FAM69CQ0P6D2 419 aa34.46■■■■□ 3.11
MVB12A-202ENST00000524382 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
MVB12A-202ENST00000524382 NPM1P06748 294 aaKnown RBP eCLIP34.38■■■■□ 3.09
MVB12A-202ENST00000524382 MAPKBP1O60336 1514 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms