RNA–Protein interactions for RNA: ENST00000535182.1

MMP17-204, Transcript of matrix metallopeptidase 17, humanhuman

TSL 2

Gene MMP17, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-204ENST00000535182 NISCHQ9Y2I1 1504 aa39.77■■■■□ 3.96
MMP17-204ENST00000535182 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
MMP17-204ENST00000535182 ABCC9O60706 1549 aa34.57■■■■□ 3.12
MMP17-204ENST00000535182 DCAF8L2P0C7V8 631 aa33.38■■■□□ 2.93
MMP17-204ENST00000535182 RB1CC1Q8TDY2 1594 aa33.21■■■□□ 2.91
MMP17-204ENST00000535182 NACADO15069 1562 aa33.17■■■□□ 2.9
MMP17-204ENST00000535182 ZCCHC6Q5VYS8 1495 aaKnown RBP33.13■■■□□ 2.89
MMP17-204ENST00000535182 MYO15BQ96JP2 1530 aa32.94■■■□□ 2.86
MMP17-204ENST00000535182 DCAF1Q9Y4B6 1507 aa32.85■■■□□ 2.85
MMP17-204ENST00000535182 UNC13AQ9UPW8 1703 aa32.43■■■□□ 2.78
MMP17-204ENST00000535182 PABPN1Q86U42 306 aaKnown RBP eCLIP32.36■■■□□ 2.77
MMP17-204ENST00000535182 SCRIBQ14160 1630 aa32.3■■■□□ 2.76
MMP17-204ENST00000535182 BICRAQ9NZM4 1560 aa32.19■■■□□ 2.74
MMP17-204ENST00000535182 SHROOM4Q9ULL8 1493 aa31.79■■■□□ 2.68
MMP17-204ENST00000535182 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
MMP17-204ENST00000535182 EIF4G1Q04637 1599 aaKnown RBP31.35■■■□□ 2.61
MMP17-204ENST00000535182 CC2D2AQ9P2K1 1620 aa31.22■■■□□ 2.59
MMP17-204ENST00000535182 CECR2Q9BXF3 1484 aa31.02■■■□□ 2.56
MMP17-204ENST00000535182 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
MMP17-204ENST00000535182 BAZ1AQ9NRL2 1556 aaPredicted RBP30.82■■■□□ 2.52
MMP17-204ENST00000535182 MROH2BQ7Z745 1585 aa30.69■■■□□ 2.5
MMP17-204ENST00000535182 ATAD2BQ9ULI0 1458 aa30.67■■■□□ 2.5
MMP17-204ENST00000535182 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
MMP17-204ENST00000535182 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
MMP17-204ENST00000535182 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
MMP17-204ENST00000535182 HMGXB3Q12766 1538 aa30.46■■■□□ 2.47
MMP17-204ENST00000535182 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
MMP17-204ENST00000535182 WIZO95785 1651 aa30.36■■■□□ 2.45
MMP17-204ENST00000535182 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
MMP17-204ENST00000535182 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.4
MMP17-204ENST00000535182 NESP48681 1621 aa29.93■■■□□ 2.38
MMP17-204ENST00000535182 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
MMP17-204ENST00000535182 LAMC3Q9Y6N6 1575 aa29.79■■■□□ 2.36
MMP17-204ENST00000535182 SUPT5HO00267 1087 aaKnown RBP29.79■■■□□ 2.36
MMP17-204ENST00000535182 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
MMP17-204ENST00000535182 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
MMP17-204ENST00000535182 PDS5BQ9NTI5 1447 aa29.63■■■□□ 2.33
MMP17-204ENST00000535182 CFTRP13569 1480 aa29.58■■■□□ 2.33
MMP17-204ENST00000535182 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
MMP17-204ENST00000535182 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
MMP17-204ENST00000535182 THOC2Q8NI27 1593 aaKnown RBP29.39■■■□□ 2.3
MMP17-204ENST00000535182 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
MMP17-204ENST00000535182 CUX2O14529 1486 aa29.37■■■□□ 2.29
MMP17-204ENST00000535182 MRC2Q9UBG0 1479 aa29.32■■■□□ 2.28
MMP17-204ENST00000535182 PRDM2Q13029 1718 aa29.31■■■□□ 2.28
MMP17-204ENST00000535182 WDR62O43379 1518 aa29.19■■■□□ 2.26
MMP17-204ENST00000535182 URB2Q14146 1524 aaKnown RBP29.13■■■□□ 2.25
MMP17-204ENST00000535182 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
MMP17-204ENST00000535182 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
MMP17-204ENST00000535182 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
MMP17-204ENST00000535182 CUX1P39880 1505 aa28.78■■■□□ 2.2
MMP17-204ENST00000535182 IFT140Q96RY7 1462 aa28.76■■■□□ 2.19
MMP17-204ENST00000535182 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
MMP17-204ENST00000535182 FGD5Q6ZNL6 1462 aa28.68■■■□□ 2.18
MMP17-204ENST00000535182 RAD54L2Q9Y4B4 1467 aa28.65■■■□□ 2.18
MMP17-204ENST00000535182 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.18
MMP17-204ENST00000535182 SOGA1O94964 1423 aa28.64■■■□□ 2.18
MMP17-204ENST00000535182 WRNQ14191 1432 aaPredicted RBP eCLIP28.64■■■□□ 2.18
MMP17-204ENST00000535182 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
MMP17-204ENST00000535182 SYNJ1O43426 1573 aa28.55■■■□□ 2.16
MMP17-204ENST00000535182 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
MMP17-204ENST00000535182 AQRO60306 1485 aaKnown RBP eCLIP28.52■■■□□ 2.168e-7■■■■□ 22.4
MMP17-204ENST00000535182 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
MMP17-204ENST00000535182 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
MMP17-204ENST00000535182 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
MMP17-204ENST00000535182 DNAJC5Q9H3Z4 198 aa28.42■■■□□ 2.14
MMP17-204ENST00000535182 WDR97A6NE52 1622 aa28.38■■■□□ 2.13
MMP17-204ENST00000535182 ABCA10Q8WWZ4 1543 aa28.38■■■□□ 2.13
MMP17-204ENST00000535182 GAPVD1Q14C86 1478 aa28.29■■■□□ 2.12
MMP17-204ENST00000535182 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
MMP17-204ENST00000535182 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
MMP17-204ENST00000535182 FBLN2P98095 1184 aa28.24■■■□□ 2.11
MMP17-204ENST00000535182 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
MMP17-204ENST00000535182 ABCA5Q8WWZ7 1642 aa28.24■■■□□ 2.11
MMP17-204ENST00000535182 PBRM1Q86U86 1689 aa28.2■■■□□ 2.11
MMP17-204ENST00000535182 MAGI1Q96QZ7 1491 aaPredicted RBP28.16■■■□□ 2.1
MMP17-204ENST00000535182 CHD1O14646 1710 aa28.14■■■□□ 2.1
MMP17-204ENST00000535182 CHMP7Q8WUX9 453 aaPredicted RBP28.12■■■□□ 2.09
MMP17-204ENST00000535182 TRIM41Q8WV44 630 aa28.08■■■□□ 2.09
MMP17-204ENST00000535182 SYNJ2O15056 1496 aa28.06■■■□□ 2.08
MMP17-204ENST00000535182 KIF27Q86VH2 1401 aa28.03■■■□□ 2.08
MMP17-204ENST00000535182 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
MMP17-204ENST00000535182 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
MMP17-204ENST00000535182 FHAD1B1AJZ9 1412 aa27.96■■■□□ 2.07
MMP17-204ENST00000535182 IGF1RP08069 1367 aa27.9■■■□□ 2.06
MMP17-204ENST00000535182 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
MMP17-204ENST00000535182 RUSC2Q8N2Y8 1516 aa27.83■■■□□ 2.05
MMP17-204ENST00000535182 CLASP1Q7Z460 1538 aa27.81■■■□□ 2.04
MMP17-204ENST00000535182 CUL7Q14999 1698 aa27.78■■■□□ 2.04
MMP17-204ENST00000535182 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
MMP17-204ENST00000535182 CARMIL1Q5VZK9 1371 aa27.76■■■□□ 2.03
MMP17-204ENST00000535182 CEP170Q5SW79 1584 aa27.76■■■□□ 2.03
MMP17-204ENST00000535182 ARHGEF11O15085 1522 aa27.75■■■□□ 2.03
MMP17-204ENST00000535182 NUP160Q12769 1436 aa27.75■■■□□ 2.03
MMP17-204ENST00000535182 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
MMP17-204ENST00000535182 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
MMP17-204ENST00000535182 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
MMP17-204ENST00000535182 RAPGEF2Q9Y4G8 1499 aa27.59■■■□□ 2.01
MMP17-204ENST00000535182 FAM9AQ8IZU1 332 aaPredicted RBP27.57■■■□□ 2
MMP17-204ENST00000535182 CYB5RLQ6IPT4 315 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms