RNA–Protein interactions for RNA: ENST00000594784.1

MVB12A-213, Transcript of multivesicular body subunit 12A, humanhuman

TSL 5

Gene MVB12A, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-213ENST00000594784 NISCHQ9Y2I1 1504 aa47.73■■■■■ 5.23
MVB12A-213ENST00000594784 CCDC180Q9P1Z9 1646 aa42.52■■■■■ 4.4
MVB12A-213ENST00000594784 ABCC9O60706 1549 aa42.14■■■■■ 4.34
MVB12A-213ENST00000594784 RB1CC1Q8TDY2 1594 aa40.31■■■■■ 4.04
MVB12A-213ENST00000594784 DCAF8L2P0C7V8 631 aa40.26■■■■■ 4.04
MVB12A-213ENST00000594784 NACADO15069 1562 aa40.17■■■■■ 4.02
MVB12A-213ENST00000594784 MYO15BQ96JP2 1530 aa39.79■■■■□ 3.96
MVB12A-213ENST00000594784 ZCCHC6Q5VYS8 1495 aaKnown RBP39.63■■■■□ 3.94
MVB12A-213ENST00000594784 DCAF1Q9Y4B6 1507 aa39.45■■■■□ 3.91
MVB12A-213ENST00000594784 PABPN1Q86U42 306 aaKnown RBP eCLIP39.39■■■■□ 3.9
MVB12A-213ENST00000594784 UNC13AQ9UPW8 1703 aa39.23■■■■□ 3.87
MVB12A-213ENST00000594784 DNAJC5BQ9UF47 199 aa39.12■■■■□ 3.85
MVB12A-213ENST00000594784 BICRAQ9NZM4 1560 aa39.04■■■■□ 3.84
MVB12A-213ENST00000594784 SCRIBQ14160 1630 aa38.81■■■■□ 3.8
MVB12A-213ENST00000594784 SHROOM4Q9ULL8 1493 aa38.65■■■■□ 3.78
MVB12A-213ENST00000594784 EIF4G1Q04637 1599 aaKnown RBP38.09■■■■□ 3.69
MVB12A-213ENST00000594784 CC2D2AQ9P2K1 1620 aa38.04■■■■□ 3.68
MVB12A-213ENST00000594784 CECR2Q9BXF3 1484 aa37.92■■■■□ 3.66
MVB12A-213ENST00000594784 NCAPD3P42695 1498 aa37.12■■■■□ 3.53
MVB12A-213ENST00000594784 SMARCA4P51532 1647 aa37.07■■■■□ 3.53
MVB12A-213ENST00000594784 ATAD2BQ9ULI0 1458 aa37.06■■■■□ 3.52
MVB12A-213ENST00000594784 BAZ1AQ9NRL2 1556 aaPredicted RBP37.03■■■■□ 3.52
MVB12A-213ENST00000594784 SMARCA2P51531 1590 aa36.96■■■■□ 3.51
MVB12A-213ENST00000594784 HMGXB3Q12766 1538 aa36.81■■■■□ 3.48
MVB12A-213ENST00000594784 MROH2BQ7Z745 1585 aa36.77■■■■□ 3.48
MVB12A-213ENST00000594784 BAZ1BQ9UIG0 1483 aaKnown RBP36.73■■■■□ 3.47
MVB12A-213ENST00000594784 PEG3Q9GZU2 1588 aa36.72■■■■□ 3.47
MVB12A-213ENST00000594784 ERCC6Q03468 1493 aa36.38■■■■□ 3.41
MVB12A-213ENST00000594784 NESP48681 1621 aa36.31■■■■□ 3.4
MVB12A-213ENST00000594784 WIZO95785 1651 aa36.31■■■■□ 3.4
MVB12A-213ENST00000594784 RSF1Q96T23 1441 aaPredicted RBP36.24■■■■□ 3.39
MVB12A-213ENST00000594784 LAMC3Q9Y6N6 1575 aa36.15■■■■□ 3.38
MVB12A-213ENST00000594784 CUX2O14529 1486 aa36.12■■■■□ 3.37
MVB12A-213ENST00000594784 CADPSQ9ULU8 1353 aa36.04■■■■□ 3.36
MVB12A-213ENST00000594784 PDS5BQ9NTI5 1447 aa36.01■■■■□ 3.36
MVB12A-213ENST00000594784 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
MVB12A-213ENST00000594784 THOC2Q8NI27 1593 aaKnown RBP35.77■■■■□ 3.32
MVB12A-213ENST00000594784 KIF21AQ7Z4S6 1674 aa35.77■■■■□ 3.32
MVB12A-213ENST00000594784 CFTRP13569 1480 aa35.69■■■■□ 3.3
MVB12A-213ENST00000594784 DNAJC5Q9H3Z4 198 aa35.61■■■■□ 3.29
MVB12A-213ENST00000594784 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
MVB12A-213ENST00000594784 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
MVB12A-213ENST00000594784 CEP164Q9UPV0 1460 aa35.57■■■■□ 3.28
MVB12A-213ENST00000594784 CCDC88BA6NC98 1476 aa35.56■■■■□ 3.28
MVB12A-213ENST00000594784 WDR62O43379 1518 aa35.46■■■■□ 3.27
MVB12A-213ENST00000594784 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
MVB12A-213ENST00000594784 PRDM2Q13029 1718 aa35.19■■■■□ 3.22
MVB12A-213ENST00000594784 SUPT5HO00267 1087 aaKnown RBP35.12■■■■□ 3.21
MVB12A-213ENST00000594784 ABCC8Q09428 1581 aa34.98■■■■□ 3.19
MVB12A-213ENST00000594784 TOPBP1Q92547 1522 aa34.95■■■■□ 3.19
MVB12A-213ENST00000594784 IFT140Q96RY7 1462 aa34.87■■■■□ 3.17
MVB12A-213ENST00000594784 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
MVB12A-213ENST00000594784 ZNF608Q9ULD9 1512 aaPredicted RBP34.71■■■■□ 3.15
MVB12A-213ENST00000594784 OSCARQ8IYS5 282 aa34.68■■■■□ 3.14
MVB12A-213ENST00000594784 POLA1P09884 1462 aaPredicted RBP34.62■■■■□ 3.13
MVB12A-213ENST00000594784 SOGA1O94964 1423 aa34.56■■■■□ 3.12
MVB12A-213ENST00000594784 TARBP1Q13395 1621 aaKnown RBP34.54■■■■□ 3.12
MVB12A-213ENST00000594784 AQRO60306 1485 aaKnown RBP eCLIP34.52■■■■□ 3.127e-8■■■■□ 23.6
MVB12A-213ENST00000594784 RAD54L2Q9Y4B4 1467 aa34.51■■■■□ 3.11
MVB12A-213ENST00000594784 CUX1P39880 1505 aa34.5■■■■□ 3.11
MVB12A-213ENST00000594784 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
MVB12A-213ENST00000594784 FGD5Q6ZNL6 1462 aa34.48■■■■□ 3.11
MVB12A-213ENST00000594784 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
MVB12A-213ENST00000594784 FBLN2P98095 1184 aa34.29■■■■□ 3.08
MVB12A-213ENST00000594784 TRIM41Q8WV44 630 aa34.27■■■■□ 3.08
MVB12A-213ENST00000594784 WDR97A6NE52 1622 aa34.26■■■■□ 3.07
MVB12A-213ENST00000594784 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.069e-6■■■■■ 50.1
MVB12A-213ENST00000594784 GRIN2BQ13224 1484 aa34.16■■■■□ 3.06
MVB12A-213ENST00000594784 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
MVB12A-213ENST00000594784 ABCA10Q8WWZ4 1543 aa34.14■■■■□ 3.06
MVB12A-213ENST00000594784 CHMP7Q8WUX9 453 aaPredicted RBP34.12■■■■□ 3.05
MVB12A-213ENST00000594784 GAPVD1Q14C86 1478 aa34.1■■■■□ 3.05
MVB12A-213ENST00000594784 CHD1O14646 1710 aa34.1■■■■□ 3.05
MVB12A-213ENST00000594784 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
MVB12A-213ENST00000594784 MAGI1Q96QZ7 1491 aaPredicted RBP34.08■■■■□ 3.05
MVB12A-213ENST00000594784 BIVM-ERCC5R4GMW8 1640 aa34.04■■■■□ 3.04
MVB12A-213ENST00000594784 SYNJ1O43426 1573 aa34.03■■■■□ 3.04
MVB12A-213ENST00000594784 RIMBP3CA6NJZ7 1639 aa33.98■■■■□ 3.03
MVB12A-213ENST00000594784 RIMBP3BA6NNM3 1639 aa33.98■■■■□ 3.03
MVB12A-213ENST00000594784 RIMBP3Q9UFD9 1639 aa33.98■■■■□ 3.03
MVB12A-213ENST00000594784 SYNJ2O15056 1496 aa33.97■■■■□ 3.03
MVB12A-213ENST00000594784 ARHGEF11O15085 1522 aa33.97■■■■□ 3.03
MVB12A-213ENST00000594784 ABCA5Q8WWZ7 1642 aa33.95■■■■□ 3.03
MVB12A-213ENST00000594784 PBRM1Q86U86 1689 aa33.92■■■■□ 3.02
MVB12A-213ENST00000594784 CYB5RLQ6IPT4 315 aa33.83■■■■□ 3.01
MVB12A-213ENST00000594784 CLASP1Q7Z460 1538 aa33.78■■■■□ 3
MVB12A-213ENST00000594784 FHAD1B1AJZ9 1412 aa33.71■■■□□ 2.99
MVB12A-213ENST00000594784 ERICH3Q5RHP9 1530 aa33.7■■■□□ 2.99
MVB12A-213ENST00000594784 GRIN2AQ12879 1464 aa33.69■■■□□ 2.98
MVB12A-213ENST00000594784 ADAMTS12P58397 1594 aa33.67■■■□□ 2.98
MVB12A-213ENST00000594784 ARAP1Q96P48 1450 aa33.66■■■□□ 2.98
MVB12A-213ENST00000594784 NUP160Q12769 1436 aa33.55■■■□□ 2.96
MVB12A-213ENST00000594784 KIF27Q86VH2 1401 aa33.53■■■□□ 2.96
MVB12A-213ENST00000594784 CEP170Q5SW79 1584 aa33.5■■■□□ 2.95
MVB12A-213ENST00000594784 IGF1RP08069 1367 aa33.47■■■□□ 2.95
MVB12A-213ENST00000594784 JPH4Q96JJ6 628 aa33.34■■■□□ 2.93
MVB12A-213ENST00000594784 TRHP20396 242 aaPredicted RBP33.31■■■□□ 2.92
MVB12A-213ENST00000594784 ERCC6L2Q5T890 1561 aa33.29■■■□□ 2.92
MVB12A-213ENST00000594784 SHROOM2Q13796 1616 aa33.28■■■□□ 2.92
MVB12A-213ENST00000594784 CUL7Q14999 1698 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms